FFCP PHASE1:Hg19::chr1:17944832..17944849,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:17944832..17944849,+ to FFCP PHASE1:Hg19::chr1:17944832..17944849,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55160 | |EntrezGene=55160 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25540 | |HGNC=25540 | ||
|TSSclassifier=strong | |||
|UniProt=E7ETF5 | |UniProt=E7ETF5 | ||
|association_with_transcript=0bp_to_ENST00000167825,ENST00000457829_5end | |||
|cluster_id=chr1:17944832..17944849,+ | |||
|coexpression_cluster_id=C392 | |||
|description=CAGE_peak_2_at_ARHGEF10L_5end | |||
|id=chr1:17944832..17944849,+ | |||
|ontology_enrichment_celltype=CL:0002194!1.61e-44!63;CL:0000576!1.61e-44!63;CL:0000040!1.61e-44!63;CL:0000559!1.61e-44!63;CL:0002009!2.48e-42!65;CL:0000766!5.28e-40!76;CL:0002057!3.91e-39!42;CL:0000839!1.97e-37!70;CL:0000557!1.54e-36!71;CL:0000860!3.82e-35!45;CL:0000763!4.31e-20!112;CL:0000049!4.31e-20!112;CL:0002087!2.79e-19!119;CL:0000738!4.24e-18!140;CL:0002031!5.55e-15!124;CL:0000037!1.34e-10!172;CL:0000566!1.34e-10!172;CL:0000988!1.24e-09!182;CL:0002032!2.12e-09!165;CL:0000837!2.12e-09!165;CL:0002393!1.66e-08!9;CL:0002397!1.66e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;6.57e-45;39!CL:0000234;6.57e-45;39!CL:0000860;7.52e-45;33!CL:0002057;7.52e-45;33!CL:0000576;9.77e-39;48!CL:0000766;5.90e-27;69!CL:0000763;8.82e-12;100!CL:0000235;2.24e-10;6!CL:0002393;2.21e-09;6!CL:0002397;2.21e-09;6!CL:0002087;1.67e-08;104!CL:0000738;5.55e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.51e-70,48;CL:0000234,6.51e-70,48;CL:0002194,2.23e-63,59;CL:0000576,2.23e-63,59;CL:0000040,2.23e-63,59;CL:0000559,2.23e-63,59;CL:0002009,1.06e-60,61;CL:0000860,1.32e-60,42;CL:0002057,1.32e-60,42;CL:0000766,4.78e-59,72;CL:0000839,1.03e-54,66;CL:0000557,1.26e-53,67;CL:0000763,7.62e-33,108;CL:0000049,7.62e-33,108;CL:0002087,1.85e-27,115;CL:0000738,1.58e-25,136;CL:0002031,4.25e-22,120;CL:0000037,4.26e-17,168;CL:0000988,4.53e-16,177;CL:0002032,4.83e-16,161;CL:0000837,4.83e-16,161;CL:0002393,1.94e-12,9;CL:0002397,1.94e-12,9;CL:0000235,2.27e-10,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.94e-43;42!CL:0000049;5.26e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.02e-40!102;UBERON:0003061!2.02e-40!102;UBERON:0002193!4.16e-36!112;UBERON:0002371!2.49e-35!80;UBERON:0001474!5.52e-31!86;UBERON:0003081!6.13e-28!216;UBERON:0007023!1.08e-27!115;UBERON:0004765!2.65e-25!101;UBERON:0001434!2.65e-25!101;UBERON:0002405!7.99e-24!115;UBERON:0002204!2.29e-20!167;UBERON:0000926!8.41e-11!448;UBERON:0004120!8.41e-11!448;UBERON:0006603!8.41e-11!448;UBERON:0000467!1.45e-09!625;UBERON:0000480!1.86e-09!626;UBERON:0000062!3.11e-08!511;UBERON:0000468!6.62e-08!659;UBERON:0000479!6.00e-07!787 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.85e-54,98;UBERON:0003061,7.85e-54,98;UBERON:0002371,3.59e-53,76;UBERON:0002193,2.97e-48,108;UBERON:0001474,7.46e-48,82;UBERON:0002405,7.29e-43,93;UBERON:0004765,7.09e-42,90;UBERON:0003081,1.34e-37,203;UBERON:0001434,4.17e-37,100;UBERON:0000926,5.41e-27,315;UBERON:0004120,5.41e-27,315;UBERON:0006603,5.41e-27,315;UBERON:0002204,4.96e-26,167;UBERON:0007023,3.26e-14,114;UBERON:0000923,1.92e-09,560;UBERON:0010316,1.92e-09,560;UBERON:0005291,1.92e-09,560;UBERON:0006598,1.92e-09,560;UBERON:0010317,1.92e-09,560;UBERON:0002532,1.92e-09,560;UBERON:0002050,3.69e-09,564;UBERON:0005423,5.28e-08,581;UBERON:0000922,2.66e-07,592 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.96597234917155,1.31883489114227,0,0.662794751455832,1.34465029290355,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,1.53531759238885,4.18003532953405,0,0,0,0,0,0,10.5259127621057,9.42558903109666,6.51032612147556,44.7830948479849,26.2353869475373,45.590875471251,11.9226555799243,15.1150377475524,18.6789727114618,27.6590553917765,38.2386135860298,22.9182714462377,18.9876978932619,34.0693739683704,24.8306341383014,10.6871161028352,8.39130088658974,6.77132432971709,22.5890807451126,24.5615535052061,33.4837991823176,15.9163624032869,19.5766706516417,16.6227652707751,23.0895910130701,28.9222303551366,29.8357325372886,13.6398342155434,18.1563271901165,16.1933784738849,16.0799145764316,30.7674921867919,19.3298071787554,11.502590550034,21.7283805232663,16.7725065343669,8.87272202510155,5.95292039902122,9.22498040236854,12.1314921638215,8.71025978480737,5.94684670779196,3.13514018115373,1.9891667719909,2.37463399894024,0,0,0,0.853460445133014,0,0,0.661044872784862,0,0,0,0,0,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.752875595388864,0.383959833463255,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,2.42311289670768,0,0,0.324547393654683,0.696518949197069,3.72282289452822,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0.759783069987479,0.397227542439656,0.286836620748814,0.709336764396714,0.560677600142307,1.06748995729705,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,1.07633781413317,0,1.27159140695737,0.300091096084402,0.103052529238439,2.06112432036503,0.930584281657949,0.675105328965065,0.0974370051611986,0,0,0,0,0.201504196455281,1.01736355386293,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.1980052905282,16.3802985597466,33.7392738395413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0.602878754119172,0.871533458600294,0.199945982364114,19.4598049025905,13.5609414686674,14.7583757638122,2.39624855491583,0,0,1.44781306667579,4.9314317412092,2.86497541183833,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0.601892199455438,0,0,0,0.184369168541703,0,0.195801157462741,0,2.89475236572042,4.31428401637234,2.98837161849644,1.81876542867756,3.32870879020994,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57602529119306,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0.464845549297286,0,0,0,0.532306030317022,0,0,0.429374660225974,0,0.316379424718726,0,0.511795582622668,0.42793898803392,0,0,0,0,0,1.01091240786658,0,0,0,0.487426979262569,0,0,0,0,0,1.99031692572366,2.63070531152258,0,0,1.82619339266434,0.6196469961995,0.281695602532241,0,0,3.21003946333125,1.06428319221179,0,1.31717957183961,0,0,0,0,0,2.91845782408015,0,0,0,0,1.01489521846434,0.764637207142375,2.84823593587081,0.714695326373367,2.46817363851717,6.48473311192717,4.32025149790492,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0.614481528616916,0.671028323677248,0.500547425135725,0,0,0,0,0,0,0,4.24873719888493,0,0,0,0.71623345421307,0.296964680832639,0,0,0.422008249231538,0,0,0,11.556383318562,1.10513566212459,0,0,0,0,0,0,0,3.25523238601881,2.3948309234694,5.55684950723184,0,0.556608588971108,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.361789315876224,0,0.331737779793674,0,0.658156191461918,0,0,2.23155749661011,0,0,0,0,0.957003479195758,0,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21143911258348,0,0,0,0,0.876214728748802,0,0.234264445725339,0,0,0,0.789168805698781,0,0,4.54943373325113,0,0,0,0,0,0,0,0,0,0,0,2.79562669187248,0,0,0,0,2.61870344518732,0,0.225980740780532,0,0,0.316553979779393,0,0,2.34798294213288,0,0,0,0,0,0,0,0,0.627617077873999,0,0,0,0.821432273351958,0,0,0,1.67569440763353,2.97908551215189,7.17873024576814,1.59743200399193,2.14613024068285,4.24025769139558,0.873385142327441,0.360299883542404,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0.425246896606173,0,0.394028536495991,0.629455057619977,0,0,0,2.85878130549347,1.32418394073086,0,1.08599920350743,1.72844298240254,0,0,0,0,0,0,0,0,0.79339561045614,0,0,1.9221734262185,1.72924735609633,4.14239055347196,0,0,0,0,0,2.506898940227,0.306345576763462,0.983617892129413,0,0,0,0.250381861413,0,1.55300672151593,1.1177352529449,0,0,0,0,0.235265819698172,0,0,0,0,0,1.89403005275089,2.26411111577318,5.33886732957922,0,0,0,0,0,0,0,0,0.265841714557995,0.521745061811734,0,0.761610424337591,0.406870733204662,0.363697318405119,0.107410557042488,0,0.398095888698616,8.40058305792623,0,0.336749488765919,7.57109389371906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0,0,0,0,0.567515953566836,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0.12845845019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| ||
|short_description=p2@ARHGEF10L | |||
}} | }} |
Latest revision as of 22:27, 18 September 2015
Short description: | p2@ARHGEF10L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARHGEF10L_5end |
Coexpression cluster: | C392_Monocytederived_CD14_Macrophage_CD14CD16_Dendritic_Eosinophils_migratory |
Association with transcript: | 0bp_to_ENST00000167825, ENST00000457829_5end |
EntrezGene: | ARHGEF10L |
HGNC: | 25540 |
UniProt: | E7ETF5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.51e-70 | 48 |
phagocyte | 6.51e-70 | 48 |
monopoietic cell | 2.23e-63 | 59 |
monocyte | 2.23e-63 | 59 |
monoblast | 2.23e-63 | 59 |
promonocyte | 2.23e-63 | 59 |
macrophage dendritic cell progenitor | 1.06e-60 | 61 |
classical monocyte | 1.32e-60 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.32e-60 | 42 |
myeloid leukocyte | 4.78e-59 | 72 |
myeloid lineage restricted progenitor cell | 1.03e-54 | 66 |
granulocyte monocyte progenitor cell | 1.26e-53 | 67 |
myeloid cell | 7.62e-33 | 108 |
common myeloid progenitor | 7.62e-33 | 108 |
nongranular leukocyte | 1.85e-27 | 115 |
leukocyte | 1.58e-25 | 136 |
hematopoietic lineage restricted progenitor cell | 4.25e-22 | 120 |
hematopoietic stem cell | 4.26e-17 | 168 |
hematopoietic cell | 4.53e-16 | 177 |
hematopoietic oligopotent progenitor cell | 4.83e-16 | 161 |
hematopoietic multipotent progenitor cell | 4.83e-16 | 161 |
intermediate monocyte | 1.94e-12 | 9 |
CD14-positive, CD16-positive monocyte | 1.94e-12 | 9 |
macrophage | 2.27e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.85e-54 | 98 |
blood island | 7.85e-54 | 98 |
bone marrow | 3.59e-53 | 76 |
hemolymphoid system | 2.97e-48 | 108 |
bone element | 7.46e-48 | 82 |
immune system | 7.29e-43 | 93 |
skeletal element | 7.09e-42 | 90 |
lateral plate mesoderm | 1.34e-37 | 203 |
skeletal system | 4.17e-37 | 100 |
mesoderm | 5.41e-27 | 315 |
mesoderm-derived structure | 5.41e-27 | 315 |
presumptive mesoderm | 5.41e-27 | 315 |
musculoskeletal system | 4.96e-26 | 167 |
adult organism | 3.26e-14 | 114 |
germ layer | 1.92e-09 | 560 |
germ layer / neural crest | 1.92e-09 | 560 |
embryonic tissue | 1.92e-09 | 560 |
presumptive structure | 1.92e-09 | 560 |
germ layer / neural crest derived structure | 1.92e-09 | 560 |
epiblast (generic) | 1.92e-09 | 560 |
embryonic structure | 3.69e-09 | 564 |
developing anatomical structure | 5.28e-08 | 581 |
embryo | 2.66e-07 | 592 |