FFCP PHASE1:Hg19::chr12:52887034..52887049,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3853 | |EntrezGene=3853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6443 | |HGNC=6443 | ||
|TSSclassifier=strong | |||
|UniProt=P02538 | |UniProt=P02538 | ||
|association_with_transcript=0bp_to_ENST00000330722_5end | |association_with_transcript=0bp_to_ENST00000330722_5end | ||
|cluster_id=chr12:52887034..52887049,- | |||
|coexpression_cluster_id=C594 | |coexpression_cluster_id=C594 | ||
|description=CAGE_peak_1_at_KRT6A_5end | |description=CAGE_peak_1_at_KRT6A_5end | ||
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|ontology_enrichment_celltype=CL:0002076!7.44e-21!43;CL:0000066!3.50e-15!254;CL:0000223!9.89e-14!59;CL:0002251!5.72e-11!21;CL:0002368!5.52e-10!13;CL:0002159!1.36e-08!13;CL:0000076!3.98e-07!62 | |ontology_enrichment_celltype=CL:0002076!7.44e-21!43;CL:0000066!3.50e-15!254;CL:0000223!9.89e-14!59;CL:0002251!5.72e-11!21;CL:0002368!5.52e-10!13;CL:0002159!1.36e-08!13;CL:0000076!3.98e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0002076;7.03e-18;42!CL:0002368;3.89e-13;13!CL:0002251;7.71e-13;20!CL:0002159;2.11e-10;14!CL:0002202;3.51e-08;9!CL:0002632;3.51e-08;9!CL:0000622;4.76e-08;5!CL:0000349;8.50e-08;19!CL:0000244;6.28e-07;4!CL:0000731;6.28e-07;4 | |ontology_enrichment_celltype_v019=CL:0002076;7.03e-18;42!CL:0002368;3.89e-13;13!CL:0002251;7.71e-13;20!CL:0002159;2.11e-10;14!CL:0002202;3.51e-08;9!CL:0002632;3.51e-08;9!CL:0000622;4.76e-08;5!CL:0000349;8.50e-08;19!CL:0000244;6.28e-07;4!CL:0000731;6.28e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,7.72e-24,42;CL:0000223,1.00e-16,58;CL:0000066,1.42e-16,253;CL:0002368,3.89e-13,13;CL:0002251,8.13e-13,20;CL:0002159,2.12e-10,14;CL:0002202,3.49e-08,9;CL:0002632,3.49e-08,9;CL:0000622,4.76e-08,5;CL:0000349,8.50e-08,19;CL:0000244,6.29e-07,4;CL:0000731,6.29e-07,4;CL:0002077,9.27e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000223;1.57e-09;58 | |ontology_enrichment_development_v019=CL:0000223;1.57e-09;58 | ||
|ontology_enrichment_disease=DOID:1749!6.52e-09!14 | |ontology_enrichment_disease=DOID:1749!6.52e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;4.73e-10;14 | |ontology_enrichment_disease_v019=DOID:1749;4.73e-10;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,4.83e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.86e-17!169;UBERON:0000925!2.86e-17!169;UBERON:0006595!2.86e-17!169;UBERON:0001004!2.18e-14!72;UBERON:0000077!6.29e-11!130;UBERON:0001007!7.84e-11!155;UBERON:0001555!7.84e-11!155;UBERON:0007026!7.84e-11!155;UBERON:0000065!1.19e-10!53;UBERON:0005631!1.36e-10!14;UBERON:0000158!1.36e-10!14;UBERON:0000161!1.82e-10!35;UBERON:0004923!5.28e-10!57;UBERON:0003102!9.74e-10!95;UBERON:0005181!4.51e-09!35;UBERON:0000922!1.14e-08!612;UBERON:0000062!1.15e-08!511;UBERON:0005178!1.31e-08!34;UBERON:0002224!1.31e-08!34;UBERON:0002050!1.73e-08!605;UBERON:0005423!1.73e-08!605;UBERON:0000064!2.03e-08!219;UBERON:0003124!2.90e-08!7;UBERON:0004921!3.72e-08!129;UBERON:0004185!3.72e-08!129;UBERON:0005911!3.76e-08!82;UBERON:0000923!4.09e-08!604;UBERON:0005291!4.09e-08!604;UBERON:0006598!4.09e-08!604;UBERON:0002532!4.09e-08!604;UBERON:0007196!7.92e-08!14;UBERON:0001558!7.92e-08!14;UBERON:0000166!1.03e-07!21;UBERON:0000467!1.12e-07!625;UBERON:0000480!1.36e-07!626;UBERON:0000468!1.40e-07!659;UBERON:0005157!2.43e-07!51;UBERON:0005153!2.94e-07!37;UBERON:0000165!3.01e-07!28;UBERON:0000930!3.01e-07!28;UBERON:0000072!5.61e-07!46;UBERON:0000344!7.59e-07!12 | |ontology_enrichment_uberon=UBERON:0004119!2.86e-17!169;UBERON:0000925!2.86e-17!169;UBERON:0006595!2.86e-17!169;UBERON:0001004!2.18e-14!72;UBERON:0000077!6.29e-11!130;UBERON:0001007!7.84e-11!155;UBERON:0001555!7.84e-11!155;UBERON:0007026!7.84e-11!155;UBERON:0000065!1.19e-10!53;UBERON:0005631!1.36e-10!14;UBERON:0000158!1.36e-10!14;UBERON:0000161!1.82e-10!35;UBERON:0004923!5.28e-10!57;UBERON:0003102!9.74e-10!95;UBERON:0005181!4.51e-09!35;UBERON:0000922!1.14e-08!612;UBERON:0000062!1.15e-08!511;UBERON:0005178!1.31e-08!34;UBERON:0002224!1.31e-08!34;UBERON:0002050!1.73e-08!605;UBERON:0005423!1.73e-08!605;UBERON:0000064!2.03e-08!219;UBERON:0003124!2.90e-08!7;UBERON:0004921!3.72e-08!129;UBERON:0004185!3.72e-08!129;UBERON:0005911!3.76e-08!82;UBERON:0000923!4.09e-08!604;UBERON:0005291!4.09e-08!604;UBERON:0006598!4.09e-08!604;UBERON:0002532!4.09e-08!604;UBERON:0007196!7.92e-08!14;UBERON:0001558!7.92e-08!14;UBERON:0000166!1.03e-07!21;UBERON:0000467!1.12e-07!625;UBERON:0000480!1.36e-07!626;UBERON:0000468!1.40e-07!659;UBERON:0005157!2.43e-07!51;UBERON:0005153!2.94e-07!37;UBERON:0000165!3.01e-07!28;UBERON:0000930!3.01e-07!28;UBERON:0000072!5.61e-07!46;UBERON:0000344!7.59e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.69e-09;10!UBERON:0000158;5.69e-09;10!UBERON:0000161;1.68e-08;19!UBERON:0000166;1.68e-08;19!UBERON:0000165;2.80e-08;28!UBERON:0000365;5.66e-08;5!UBERON:0000478;5.83e-08;24!UBERON:0000077;7.67e-08;27!UBERON:0000974;1.17e-07;6!UBERON:0000344;1.17e-07;20!UBERON:0000486;2.25e-07;12!UBERON:0004923;4.58e-07;55!UBERON:0005911;5.58e-07;36!UBERON:0007196;5.65e-07;15!UBERON:0001558;5.65e-07;15!UBERON:0001987;8.07e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0005631;5.69e-09;10!UBERON:0000158;5.69e-09;10!UBERON:0000161;1.68e-08;19!UBERON:0000166;1.68e-08;19!UBERON:0000165;2.80e-08;28!UBERON:0000365;5.66e-08;5!UBERON:0000478;5.83e-08;24!UBERON:0000077;7.67e-08;27!UBERON:0000974;1.17e-07;6!UBERON:0000344;1.17e-07;20!UBERON:0000486;2.25e-07;12!UBERON:0004923;4.58e-07;55!UBERON:0005911;5.58e-07;36!UBERON:0007196;5.65e-07;15!UBERON:0001558;5.65e-07;15!UBERON:0001987;8.07e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.86e-16,160;UBERON:0000925,1.86e-16,160;UBERON:0006595,1.86e-16,160;UBERON:0001004,1.61e-14,74;UBERON:0003102,5.80e-14,99;UBERON:0005631,6.09e-14,14;UBERON:0000158,6.09e-14,14;UBERON:0000161,3.79e-13,36;UBERON:0004923,9.89e-11,66;UBERON:0003124,1.77e-10,7;UBERON:0000166,5.64e-10,22;UBERON:0001007,1.07e-09,145;UBERON:0001555,1.07e-09,145;UBERON:0007026,1.07e-09,145;UBERON:0000065,1.88e-09,54;UBERON:0000153,1.40e-08,62;UBERON:0007811,1.40e-08,62;UBERON:0000365,5.66e-08,5;UBERON:0000478,5.83e-08,24;UBERON:0000165,7.57e-08,29;UBERON:0000930,7.57e-08,29;UBERON:0000344,1.23e-07,20;UBERON:0004921,1.86e-07,118;UBERON:0000974,2.05e-07,10;UBERON:0005181,2.51e-07,35;UBERON:0005911,3.76e-07,82;UBERON:0000077,4.79e-07,29;UBERON:0007196,5.63e-07,15;UBERON:0001558,5.63e-07,15;UBERON:0000033,8.05e-07,56;UBERON:0001987,8.07e-07,4;UBERON:0004340,8.07e-07,4;UBERON:0005178,8.26e-07,34;UBERON:0002224,8.26e-07,34 | |||
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| ||
|short_description=p1@KRT6A | |short_description=p1@KRT6A | ||
}} | }} |
Latest revision as of 22:54, 18 September 2015
Short description: | p1@KRT6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT6A_5end |
Coexpression cluster: | C594_Keratinocyte_Placental_amniotic_Esophageal_tongue_Corneal_Prostate |
Association with transcript: | 0bp_to_ENST00000330722_5end |
EntrezGene: | KRT6A |
HGNC: | 6443 |
UniProt: | P02538 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 7.72e-24 | 42 |
endodermal cell | 1.00e-16 | 58 |
epithelial cell | 1.42e-16 | 253 |
respiratory epithelial cell | 3.89e-13 | 13 |
epithelial cell of alimentary canal | 8.13e-13 | 20 |
general ecto-epithelial cell | 2.12e-10 | 14 |
epithelial cell of tracheobronchial tree | 3.49e-08 | 9 |
epithelial cell of lower respiratory tract | 3.49e-08 | 9 |
acinar cell | 4.76e-08 | 5 |
extraembryonic cell | 8.50e-08 | 19 |
transitional epithelial cell | 6.29e-07 | 4 |
urothelial cell | 6.29e-07 | 4 |
ecto-epithelial cell | 9.27e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.86e-16 | 160 |
endoderm | 1.86e-16 | 160 |
presumptive endoderm | 1.86e-16 | 160 |
respiratory system | 1.61e-14 | 74 |
surface structure | 5.80e-14 | 99 |
extraembryonic membrane | 6.09e-14 | 14 |
membranous layer | 6.09e-14 | 14 |
orifice | 3.79e-13 | 36 |
organ component layer | 9.89e-11 | 66 |
chorion | 1.77e-10 | 7 |
oral opening | 5.64e-10 | 22 |
digestive system | 1.07e-09 | 145 |
digestive tract | 1.07e-09 | 145 |
primitive gut | 1.07e-09 | 145 |
respiratory tract | 1.88e-09 | 54 |
anterior region of body | 1.40e-08 | 62 |
craniocervical region | 1.40e-08 | 62 |
urothelium | 5.66e-08 | 5 |
extraembryonic structure | 5.83e-08 | 24 |
mouth | 7.57e-08 | 29 |
stomodeum | 7.57e-08 | 29 |
mucosa | 1.23e-07 | 20 |
subdivision of digestive tract | 1.86e-07 | 118 |
neck | 2.05e-07 | 10 |
thoracic segment organ | 2.51e-07 | 35 |
endo-epithelium | 3.76e-07 | 82 |
mixed endoderm/mesoderm-derived structure | 4.79e-07 | 29 |
tracheobronchial tree | 5.63e-07 | 15 |
lower respiratory tract | 5.63e-07 | 15 |
head | 8.05e-07 | 56 |
placenta | 8.07e-07 | 4 |
allantois | 8.07e-07 | 4 |
thoracic cavity element | 8.26e-07 | 34 |
thoracic cavity | 8.26e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.83e-10 | 14 |