FFCP PHASE1:Hg19::chr3:5229456..5229471,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9695 | |EntrezGene=9695 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18967 | |HGNC=18967 | ||
|TSSclassifier=strong | |||
|UniProt=F8WE67 | |UniProt=F8WE67 | ||
|association_with_transcript=7bp_to_ENST00000443790_5end | |association_with_transcript=7bp_to_ENST00000443790_5end | ||
|cluster_id=chr3:5229456..5229471,+ | |||
|coexpression_cluster_id=C2743 | |coexpression_cluster_id=C2743 | ||
|description=CAGE_peak_7_at_EDEM1_5end | |description=CAGE_peak_7_at_EDEM1_5end | ||
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|ontology_enrichment_celltype_v019=CL:0000860;5.29e-23;33!CL:0002057;5.29e-23;33!CL:0000576;2.57e-22;48!CL:0000451;3.04e-20;10!CL:0000990;5.68e-17;8!CL:0000473;1.28e-15;39!CL:0000234;1.28e-15;39!CL:0000766;4.27e-15;69!CL:0002087;6.72e-14;104!CL:0000738;1.25e-13;136!CL:0000840;1.35e-11;5!CL:0002393;5.20e-11;6!CL:0002397;5.20e-11;6!CL:0000988;8.54e-11;177!CL:0000453;1.88e-10;5!CL:0000094;6.80e-10;8!CL:0000081;4.62e-09;11!CL:0000763;1.35e-08;100!CL:0000219;1.91e-08;193!CL:0000542;1.25e-07;53!CL:0000784;9.77e-07;3 | |ontology_enrichment_celltype_v019=CL:0000860;5.29e-23;33!CL:0002057;5.29e-23;33!CL:0000576;2.57e-22;48!CL:0000451;3.04e-20;10!CL:0000990;5.68e-17;8!CL:0000473;1.28e-15;39!CL:0000234;1.28e-15;39!CL:0000766;4.27e-15;69!CL:0002087;6.72e-14;104!CL:0000738;1.25e-13;136!CL:0000840;1.35e-11;5!CL:0002393;5.20e-11;6!CL:0002397;5.20e-11;6!CL:0000988;8.54e-11;177!CL:0000453;1.88e-10;5!CL:0000094;6.80e-10;8!CL:0000081;4.62e-09;11!CL:0000763;1.35e-08;100!CL:0000219;1.91e-08;193!CL:0000542;1.25e-07;53!CL:0000784;9.77e-07;3 | ||
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|ontology_enrichment_development_v019=CL:0002057;4.62e-25;42!CL:0000049;2.56e-10;108!CL:0000051;1.25e-07;53 | |ontology_enrichment_development_v019=CL:0002057;4.62e-25;42!CL:0000049;2.56e-10;108!CL:0000051;1.25e-07;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.98e-20!102;UBERON:0003061!7.98e-20!102;UBERON:0002193!5.41e-18!112;UBERON:0002371!6.54e-18!80;UBERON:0001474!8.78e-17!86;UBERON:0002384!5.54e-14!375;UBERON:0002405!6.96e-14!115;UBERON:0004765!1.75e-13!101;UBERON:0001434!1.75e-13!101;UBERON:0002204!3.34e-08!167 | |ontology_enrichment_uberon=UBERON:0002390!7.98e-20!102;UBERON:0003061!7.98e-20!102;UBERON:0002193!5.41e-18!112;UBERON:0002371!6.54e-18!80;UBERON:0001474!8.78e-17!86;UBERON:0002384!5.54e-14!375;UBERON:0002405!6.96e-14!115;UBERON:0004765!1.75e-13!101;UBERON:0001434!1.75e-13!101;UBERON:0002204!3.34e-08!167 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p7@EDEM1 | |short_description=p7@EDEM1 | ||
}} | }} |
Latest revision as of 23:11, 18 September 2015
Short description: | p7@EDEM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_EDEM1_5end |
Coexpression cluster: | C2743_immature_migratory_cord_CD19_CD14_Dendritic_Natural |
Association with transcript: | 7bp_to_ENST00000443790_5end |
EntrezGene: | EDEM1 |
HGNC: | 18967 |
UniProt: | F8WE67 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.33e-33 | 98 |
blood island | 1.33e-33 | 98 |
bone marrow | 1.54e-33 | 76 |
bone element | 4.59e-30 | 82 |
hemolymphoid system | 5.21e-29 | 108 |
immune system | 1.13e-27 | 93 |
skeletal element | 1.74e-27 | 90 |
skeletal system | 2.40e-23 | 100 |
connective tissue | 6.51e-19 | 371 |
musculoskeletal system | 2.27e-11 | 167 |
lateral plate mesoderm | 6.22e-11 | 203 |