FFCP PHASE1:Hg19::chr17:18855470..18855503,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=125206 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23155 | |||
|TSSclassifier=strong | |||
|UniProt=A0PJK1,B4DPI0 | |||
|association_with_transcript=0bp_to_ENST00000395642,ENST00000395643,ENST00000395645,ENST00000395647,ENST00000417251,NM_001042450,NM_152351,uc002gut.1,uc002guu.1,uc002guv.1,uc010vyl.1_5end | |||
|cluster_id=chr17:18855470..18855503,+ | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_1_at_SLC5A10_5end | |||
|id=chr17:18855470..18855503,+ | |||
|ontology_enrichment_celltype=CL:0002566!1.70e-17!1;CL:1000497!6.68e-09!18;CL:0002518!6.68e-09!18;CL:0000239!7.70e-07!3;CL:1000615!7.70e-07!3;CL:0002306!7.70e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000239;3.24e-12;3!CL:1000615;3.24e-12;3!CL:0002306;3.24e-12;3!CL:1000497;1.04e-08;17!CL:0002518;1.04e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.24e-12,3;CL:1000615,3.24e-12,3;CL:0002306,3.24e-12,3;CL:1000497,1.04e-08,17;CL:0002518,1.04e-08,17 | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.27e-30;10!UBERON:0007687;2.27e-30;10!UBERON:0003104;1.09e-10;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000989!8.72e-18!1;UBERON:0008811!8.72e-18!1;UBERON:0006258!8.72e-18!1;UBERON:0005876!8.72e-18!1;UBERON:0004874!8.72e-18!1;UBERON:0002113!1.68e-15!27;UBERON:0003918!1.68e-15!27;UBERON:0005095!1.68e-15!27;UBERON:0007687!1.68e-15!27;UBERON:0000489!4.30e-13!32;UBERON:0005172!1.09e-10!55;UBERON:0005173!1.09e-10!55;UBERON:0002417!1.28e-09!61;UBERON:0000916!1.28e-09!61;UBERON:0006554!1.56e-09!44;UBERON:0001008!2.55e-09!45;UBERON:0006853!7.70e-07!3;UBERON:0007685!7.70e-07!3;UBERON:0004134!7.70e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.72e-22;24!UBERON:0011143;1.72e-22;24!UBERON:0000489;9.79e-19;29!UBERON:0006554;3.91e-18;30!UBERON:0001008;3.91e-18;30!UBERON:0006853;3.24e-12;3!UBERON:0007685;3.24e-12;3!UBERON:0004134;3.24e-12;3!UBERON:0005172;3.22e-08;52!UBERON:0005173;3.22e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,8.14e-21,26;UBERON:0003918,8.14e-21,26;UBERON:0011143,8.14e-21,26;UBERON:0005095,8.14e-21,26;UBERON:0007687,8.14e-21,26;UBERON:0000489,1.43e-17,31;UBERON:0006853,3.24e-12,3;UBERON:0007685,3.24e-12,3;UBERON:0004134,3.24e-12,3;UBERON:0006554,8.39e-12,47;UBERON:0001008,1.44e-11,48;UBERON:0005172,2.40e-10,54;UBERON:0005173,2.40e-10,54;UBERON:0002417,2.30e-09,60;UBERON:0000916,2.30e-09,60;UBERON:0003103,2.53e-08,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.3210024640164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01950509218015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,92.6755117838571,24.0766559539641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.89355492752277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37520350340484,0.47775168788705,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@SLC5A10 | |||
}} |
Latest revision as of 23:25, 18 September 2015
Short description: | p1@SLC5A10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC5A10_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 0bp_to_ENST00000395642, ENST00000395643, ENST00000395645, ENST00000395647, ENST00000417251, NM_001042450, NM_152351, uc002gut.1, uc002guu.1, uc002guv.1, uc010vyl.1_5end |
EntrezGene: | SLC5A10 |
HGNC: | 23155 |
UniProt: | A0PJK1B4DPI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.24e-12 | 3 |
kidney cortex tubule cell | 3.24e-12 | 3 |
epithelial cell of proximal tubule | 3.24e-12 | 3 |
kidney cell | 1.04e-08 | 17 |
kidney epithelial cell | 1.04e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
kidney | 8.14e-21 | 26 |
kidney mesenchyme | 8.14e-21 | 26 |
upper urinary tract | 8.14e-21 | 26 |
kidney rudiment | 8.14e-21 | 26 |
kidney field | 8.14e-21 | 26 |
cavitated compound organ | 1.43e-17 | 31 |
renal cortex tubule | 3.24e-12 | 3 |
region of nephron tubule | 3.24e-12 | 3 |
proximal tubule | 3.24e-12 | 3 |
urinary system structure | 8.39e-12 | 47 |
renal system | 1.44e-11 | 48 |
abdomen element | 2.40e-10 | 54 |
abdominal segment element | 2.40e-10 | 54 |
abdominal segment of trunk | 2.30e-09 | 60 |
abdomen | 2.30e-09 | 60 |
compound organ | 2.53e-08 | 68 |