FFCP PHASE1:Hg19::chr2:96931679..96931756,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55654 | |EntrezGene=55654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26038 | |HGNC=26038 | ||
|TSSclassifier=strong | |||
|UniProt=O75204 | |UniProt=O75204 | ||
|association_with_transcript=0bp_to_ENST00000258439,ENST00000432959,NM_001193304,NM_017849,uc002svq.2,uc002svr.2_5end | |association_with_transcript=0bp_to_ENST00000258439,ENST00000432959,NM_001193304,NM_017849,uc002svq.2,uc002svr.2_5end | ||
|cluster_id=chr2:96931679..96931756,- | |||
|coexpression_cluster_id=C2707 | |||
|description=CAGE_peak_1_at_TMEM127_5end | |description=CAGE_peak_1_at_TMEM127_5end | ||
|id=chr2:96931679..96931756,- | |id=chr2:96931679..96931756,- | ||
|ontology_enrichment_celltype=CL:0000766!2.32e-28!76;CL:0002057!5.27e-24!42;CL:0002194!1.02e-23!63;CL:0000576!1.02e-23!63;CL:0000040!1.02e-23!63;CL:0000559!1.02e-23!63;CL:0002009!1.15e-23!65;CL:0000557!2.40e-23!71;CL:0000839!1.24e-21!70;CL:0000860!1.96e-20!45;CL:0000763!6.07e-09!112;CL:0000049!6.07e-09!112;CL:0000738!9.62e-08!140 | |ontology_enrichment_celltype=CL:0000766!2.32e-28!76;CL:0002057!5.27e-24!42;CL:0002194!1.02e-23!63;CL:0000576!1.02e-23!63;CL:0000040!1.02e-23!63;CL:0000559!1.02e-23!63;CL:0002009!1.15e-23!65;CL:0000557!2.40e-23!71;CL:0000839!1.24e-21!70;CL:0000860!1.96e-20!45;CL:0000763!6.07e-09!112;CL:0000049!6.07e-09!112;CL:0000738!9.62e-08!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.27e-19;33!CL:0002057;3.27e-19;33!CL:0000473;5.61e-19;39!CL:0000234;5.61e-19;39!CL:0000576;7.99e-15;48!CL:0000766;1.45e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.97e-31,72;CL:0000473,2.74e-27,48;CL:0000234,2.74e-27,48;CL:0002194,1.60e-26,59;CL:0000576,1.60e-26,59;CL:0000040,1.60e-26,59;CL:0000559,1.60e-26,59;CL:0002009,2.17e-26,61;CL:0000557,7.39e-26,67;CL:0000839,5.00e-24,66;CL:0000860,5.27e-24,42;CL:0002057,5.27e-24,42;CL:0000763,8.15e-10,108;CL:0000049,8.15e-10,108;CL:0000738,2.01e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.44e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.11e-24!216;UBERON:0002193!7.82e-24!112;UBERON:0002390!2.03e-23!102;UBERON:0003061!2.03e-23!102;UBERON:0002371!1.21e-21!80;UBERON:0002405!6.71e-21!115;UBERON:0001474!1.67e-18!86;UBERON:0004765!5.87e-16!101;UBERON:0001434!5.87e-16!101;UBERON:0000926!1.36e-14!448;UBERON:0004120!1.36e-14!448;UBERON:0006603!1.36e-14!448;UBERON:0000467!5.29e-13!625;UBERON:0000480!7.72e-13!626;UBERON:0002204!1.14e-12!167;UBERON:0000468!2.36e-11!659;UBERON:0000923!8.18e-10!604;UBERON:0005291!8.18e-10!604;UBERON:0006598!8.18e-10!604;UBERON:0002532!8.18e-10!604;UBERON:0002050!9.79e-10!605;UBERON:0005423!9.79e-10!605;UBERON:0000922!1.53e-08!612;UBERON:0000062!1.13e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,9.91e-26,203;UBERON:0002193,1.27e-25,108;UBERON:0002390,2.59e-25,98;UBERON:0003061,2.59e-25,98;UBERON:0002371,8.43e-24,76;UBERON:0002405,5.25e-22,93;UBERON:0001474,2.60e-20,82;UBERON:0000926,8.66e-20,315;UBERON:0004120,8.66e-20,315;UBERON:0006603,8.66e-20,315;UBERON:0004765,1.70e-18,90;UBERON:0001434,2.30e-17,100;UBERON:0002204,1.74e-13,167;UBERON:0000923,1.08e-10,560;UBERON:0010316,1.08e-10,560;UBERON:0005291,1.08e-10,560;UBERON:0006598,1.08e-10,560;UBERON:0010317,1.08e-10,560;UBERON:0002532,1.08e-10,560;UBERON:0005423,1.88e-10,581;UBERON:0002050,3.70e-10,564;UBERON:0000922,7.01e-09,592 | |||
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| ||
|short_description=p1@TMEM127 | |short_description=p1@TMEM127 | ||
}} | }} |
Latest revision as of 00:37, 19 September 2015
Short description: | p1@TMEM127 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM127_5end |
Coexpression cluster: | C2707_Neutrophils_Eosinophils_CD14_Mesenchymal_blood_Whole_heart |
Association with transcript: | 0bp_to_ENST00000258439, ENST00000432959, NM_001193304, NM_017849, uc002svq.2, uc002svr.2_5end |
EntrezGene: | TMEM127 |
HGNC: | 26038 |
UniProt: | O75204 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.97e-31 | 72 |
defensive cell | 2.74e-27 | 48 |
phagocyte | 2.74e-27 | 48 |
monopoietic cell | 1.60e-26 | 59 |
monocyte | 1.60e-26 | 59 |
monoblast | 1.60e-26 | 59 |
promonocyte | 1.60e-26 | 59 |
macrophage dendritic cell progenitor | 2.17e-26 | 61 |
granulocyte monocyte progenitor cell | 7.39e-26 | 67 |
myeloid lineage restricted progenitor cell | 5.00e-24 | 66 |
classical monocyte | 5.27e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.27e-24 | 42 |
myeloid cell | 8.15e-10 | 108 |
common myeloid progenitor | 8.15e-10 | 108 |
leukocyte | 2.01e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 9.91e-26 | 203 |
hemolymphoid system | 1.27e-25 | 108 |
hematopoietic system | 2.59e-25 | 98 |
blood island | 2.59e-25 | 98 |
bone marrow | 8.43e-24 | 76 |
immune system | 5.25e-22 | 93 |
bone element | 2.60e-20 | 82 |
mesoderm | 8.66e-20 | 315 |
mesoderm-derived structure | 8.66e-20 | 315 |
presumptive mesoderm | 8.66e-20 | 315 |
skeletal element | 1.70e-18 | 90 |
skeletal system | 2.30e-17 | 100 |
musculoskeletal system | 1.74e-13 | 167 |
germ layer | 1.08e-10 | 560 |
germ layer / neural crest | 1.08e-10 | 560 |
embryonic tissue | 1.08e-10 | 560 |
presumptive structure | 1.08e-10 | 560 |
germ layer / neural crest derived structure | 1.08e-10 | 560 |
epiblast (generic) | 1.08e-10 | 560 |
developing anatomical structure | 1.88e-10 | 581 |
embryonic structure | 3.70e-10 | 564 |
embryo | 7.01e-09 | 592 |