FFCP PHASE1:Hg19::chr4:83821967..83821998,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:83821967..83821998,+ to FFCP PHASE1:Hg19::chr4:83821967..83821998,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79725 | |EntrezGene=79725 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23192 | |HGNC=23192 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H5L6 | |UniProt=Q9H5L6 | ||
|association_with_transcript=130bp_to_uc003hns.1,uc003hnu.1_5end | |||
|cluster_id=chr4:83821967..83821998,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_THAP9_5end | |||
|id=chr4:83821967..83821998,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.47e-25!42;CL:0000860!4.31e-25!45;CL:0000738!5.56e-23!140;CL:0000037!6.01e-22!172;CL:0000566!6.01e-22!172;CL:0002032!2.94e-19!165;CL:0000837!2.94e-19!165;CL:0000766!3.11e-19!76;CL:0000988!1.24e-18!182;CL:0002031!2.15e-16!124;CL:0000763!2.95e-16!112;CL:0000049!2.95e-16!112;CL:0002087!4.15e-16!119;CL:0000557!4.95e-16!71;CL:0000839!4.43e-14!70;CL:0002009!1.89e-13!65;CL:0002194!8.82e-13!63;CL:0000576!8.82e-13!63;CL:0000040!8.82e-13!63;CL:0000559!8.82e-13!63;CL:0000063!5.68e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.55e-40;33!CL:0002057;4.55e-40;33!CL:0000576;5.54e-28;48!CL:0000473;2.43e-26;39!CL:0000234;2.43e-26;39!CL:0000766;1.15e-22;69!CL:0000094;3.06e-14;8!CL:0002087;2.27e-12;104!CL:0000081;3.78e-12;11!CL:0000763;2.88e-11;100!CL:0002393;5.92e-11;6!CL:0002397;5.92e-11;6!CL:0000738;8.06e-10;136!CL:0000988;1.48e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.93e-51,42;CL:0002057,1.93e-51,42;CL:0000766,3.02e-50,72;CL:0000738,4.56e-49,136;CL:0000473,2.24e-43,48;CL:0000234,2.24e-43,48;CL:0000037,3.77e-42,168;CL:0000557,1.23e-40,67;CL:0000988,3.34e-40,177;CL:0000839,6.07e-37,66;CL:0002032,1.53e-36,161;CL:0000837,1.53e-36,161;CL:0000763,1.50e-35,108;CL:0000049,1.50e-35,108;CL:0002009,9.61e-35,61;CL:0002194,4.52e-34,59;CL:0000576,4.52e-34,59;CL:0000040,4.52e-34,59;CL:0000559,4.52e-34,59;CL:0002087,4.75e-34,115;CL:0002031,1.07e-33,120;CL:0000094,1.93e-14,8;CL:0000134,8.86e-14,354;CL:0002320,4.42e-13,361;CL:0000081,1.79e-12,11;CL:0000219,3.81e-11,386;CL:0002393,3.09e-09,9;CL:0002397,3.09e-09,9;CL:0000048,1.18e-08,427;CL:0000034,1.19e-08,441;CL:0000723,3.02e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;2.11e-37;42!CL:0000049;4.02e-09;108 | |||
|ontology_enrichment_disease=DOID:305!4.12e-13!106;DOID:162!5.33e-13!235;DOID:14566!3.31e-12!239;DOID:0050687!1.19e-10!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.37e-13!80;UBERON:0001474!3.95e-12!86;UBERON:0002405!3.24e-09!115;UBERON:0002390!6.27e-09!102;UBERON:0003061!6.27e-09!102;UBERON:0004765!2.65e-08!101;UBERON:0001434!2.65e-08!101;UBERON:0002193!1.99e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.40e-36,76;UBERON:0001474,3.93e-32,82;UBERON:0002390,2.23e-30,98;UBERON:0003061,2.23e-30,98;UBERON:0004765,5.21e-28,90;UBERON:0002405,1.19e-26,93;UBERON:0002193,3.77e-26,108;UBERON:0001434,8.34e-24,100;UBERON:0002384,3.90e-12,371;UBERON:0002204,1.03e-09,167;UBERON:0003081,3.64e-09,203 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0.37129905888014,0,0,0,0,0,0.246242116153576,0,0,0,0.273748850145768,0.125542639594803,0.229240217243854,0.164201178899891,0,4.72037132218685,1.53531759238885,2.94150634300544,0,0,0.369754010166788,2.32401601740905,0.853015394924529,1.17440175733939,8.30993112797816,8.02177789880567,6.2933152507597,0,0,0,1.01778767145695,0.377875943688809,1.21292030593908,4.64858073811369,6.16751832032739,6.50383378879718,6.90461741573161,9.22178543504762,9.69577142543199,26.5454174167196,23.2374486090177,35.2108865145289,3.20011977222428,3.27487380069415,3.59557575112135,26.3232147438976,27.278967301468,26.8521592835597,0.989553900560148,1.39624560335142,0.426224750532694,8.70627715885752,10.2129340444405,4.35975574296902,9.04495194924276,8.34372669472322,10.4250645458456,4.23779651843358,12.5214396235772,14.8737322097216,2.11255286311942,3.61427309940574,2.72556239160889,1.68492946719743,1.35159203557356,1.28580469357664,0.570025487482497,0.79566670879636,2.00930569141097,0,0,0,0.426730222566507,0.400395987036012,0,0,0.954053754535364,0.569212969109448,1.17447437874188,0.764546456250458,1.32171328579026,3.92355994087075,0.263384084775077,2.55722701147983,1.17903228824749,4.93443597598822,0,1.30368906653436,0,0,0.111410456885174,0.589211814949674,0.443067789167242,0.812411591295047,0.128091319725675,0.130059347559878,0,0.276350017785848,0.289803085735052,1.18629250529648,1.07016331235885,1.04535523804977,0.339928028092699,0.766440987203842,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,2.62088766192152,2.67440195783507,3.18613688542158,0,0.670700859703636,0.255725123687061,0.361439152384566,0,0,0.795285947051099,0.973269740605272,0.472674085820339,0,0.263504357079378,0.392937226493138,0.364295288292542,0,0,0,0,1.43094374583205,1.14398982156026,0.371457501329565,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0.71153252537342,0.33472061276467,0.402829317109147,0,0,0,0,0.267899184852239,0.44905874525234,0,0,0,0.183201743930407,25.038279312852,23.2668158488995,0,0,0,1.85372853138506,0.286836620748814,0,0,0,0,0.311211035399766,0.67355336034844,0.163461903113459,0,0.576175924479999,0.234321431833797,0,0,0,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0.413303124703062,1.18800285728205,0,0,0,0,0.250237039743928,0,0.438977620880838,0,0,0.226864366320042,0.717558542755448,0,0,0.600182192168805,0,0.257640540045629,0.18611685633159,0.506328996723799,0.0974370051611986,0.252433774244115,0,0.646584227275248,1.06502877754984,0,0.169560592310488,0.193260853163297,0,0,0.121973706129595,0.265059536642971,0.69716365721711,0.725627385107593,0.252320850875628,1.09493207722749,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0.220587945464788,0,0.237270619111097,0.134831308160164,0.196221465125346,0.769494313892781,0.738155454624648,0,0,0,0,0,0.590789906681404,2.6487785964879,0.614942192715568,0.171567810298526,0,0,0.100528972411631,0.277765335475589,0.651616610620649,0,0,0.34779121492523,0.234817388471643,0.288732895522148,0,0,0.790204397959275,0.858486162094873,0,0,0.297262324577456,0,0.16798212819886,0,1.16426079513703,0.290633938513962,0,4.43396914106349,0.352193736052904,3.52457796419313,1.58531948758658,2.77733353538036,0.571481048629521,0,0,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0.387815147273333,3.57656445851882,0,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0,1.64648067356154,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0,3.94061520403854,3.45004119775228,4.74869234235069,0.508189248444927,0,0.773288812777695,0,0.637938751653163,4.49404214368309,11.966458368161,7.45947924184864,0.12269149171914,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0.601892199455438,0,0,0,0,0.260650843404249,0,0,2.27444828735176,3.8828556147351,1.60091336705167,0.303127571446259,0,0.30239029332968,0.248107807818777,0.460385919864187,0,0.128139149255701,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0.116210378459959,1.32945394550784,0.200506470303285,0.276242966807689,0,0,0,0.451199612907412,0.385076685522074,0,0,0.422206515571503,0,0,0.431831832204279,0,0,0,0.254876273045038,0,0,0,0.261435451024901,1.53870075069834,0,0.650756789328606,0.103041011647722,0,0.082509499920588,0,0,0,0,0.308097234229289,0.460511024178389,0.413509717453592,0.429680979473094,0.435050081742686,0.340906509664404,0.267096106940212,0,0,0.638063562472921,0.2023155617111,0.464845549297286,1.25924938732256,0,0,0,0.869932992075073,0.18532421910392,0.143124886741991,0.372158369359667,0.316379424718726,0.190630193923825,0.511795582622668,0,0,0,0.179872457583315,0,0.589062011728432,0,0,0,0,0,0,0,0.141405431953713,0,0,0.66343897524122,0,0,0.655894752046633,0,0,0.281695602532241,0.143411352204052,0.294747123039363,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0.427296284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| ||
|short_description=p3@THAP9 | |||
}} | }} |
Latest revision as of 01:29, 19 September 2015
Short description: | p3@THAP9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_THAP9_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 130bp_to_uc003hns.1, uc003hnu.1_5end |
EntrezGene: | THAP9 |
HGNC: | 23192 |
UniProt: | Q9H5L6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.40e-36 | 76 |
bone element | 3.93e-32 | 82 |
hematopoietic system | 2.23e-30 | 98 |
blood island | 2.23e-30 | 98 |
skeletal element | 5.21e-28 | 90 |
immune system | 1.19e-26 | 93 |
hemolymphoid system | 3.77e-26 | 108 |
skeletal system | 8.34e-24 | 100 |
connective tissue | 3.90e-12 | 371 |
musculoskeletal system | 1.03e-09 | 167 |
lateral plate mesoderm | 3.64e-09 | 203 |