FFCP PHASE1:Hg19::chr10:72083650..72083662,-: Difference between revisions
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|id=chr10:72083650..72083662,-
|short_description=p7@LRRC20
|description=CAGE_peak_7_at_LRRC20_5end
|association_with_transcript=57bp_to_AL122117_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55222 | |EntrezGene=55222 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=23421 | |HGNC=23421 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=57bp_to_AL122117_5end | |||
|cluster_id=chr10:72083650..72083662,- | |||
|coexpression_cluster_id=C786 | |||
|description=CAGE_peak_7_at_LRRC20_5end | |||
|id=chr10:72083650..72083662,- | |||
|ontology_enrichment_celltype=CL:0000181!2.02e-19!12;CL:0000417!2.02e-19!12;CL:0000668!2.02e-19!12;CL:0000414!2.02e-19!12;CL:0000412!2.02e-19!12;CL:0000182!2.02e-19!12;CL:0000223!6.29e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.35e-44;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.55e-44,12;CL:0000223,1.14e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.48e-75;11!UBERON:0009497;2.20e-63;13!UBERON:0001041;6.82e-28;30!UBERON:0003104;6.38e-27;31!CL:0000223;2.28e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;8.98e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.18e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002107!1.84e-23!19;UBERON:0006925!1.84e-23!19;UBERON:0008836!1.84e-23!19;UBERON:0008835!3.61e-20!22;UBERON:0003894!3.61e-20!22;UBERON:0009854!2.91e-19!23;UBERON:0007499!1.15e-17!25;UBERON:0009497!1.15e-17!25;UBERON:0000015!1.15e-17!25;UBERON:0002423!1.15e-17!25;UBERON:0006235!1.15e-17!25;UBERON:0004161!1.15e-17!25;UBERON:0005057!5.86e-17!26;UBERON:0009856!5.86e-17!26;UBERON:0003929!1.36e-15!54;UBERON:0002365!4.17e-14!31;UBERON:0002330!4.17e-14!31;UBERON:0002368!2.07e-12!35;UBERON:0005911!7.71e-12!82;UBERON:0002530!1.81e-11!59;UBERON:0000949!1.75e-09!45;UBERON:0005172!1.28e-07!55;UBERON:0005173!1.28e-07!55;UBERON:0004921!7.66e-07!129;UBERON:0004185!7.66e-07!129;UBERON:0002417!8.61e-07!61;UBERON:0000916!8.61e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.55e-62;19!UBERON:0006925;2.55e-62;19!UBERON:0002423;1.50e-47;25!UBERON:0002365;3.61e-36;31!UBERON:0002330;3.61e-36;31!UBERON:0002368;1.19e-31;33!UBERON:0000949;6.65e-23;43!UBERON:0005172;4.30e-14;52!UBERON:0005173;4.30e-14;52!UBERON:0002530;2.41e-13;57!UBERON:0002417;2.07e-12;58!UBERON:0000916;2.07e-12;58!UBERON:0001007;3.37e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.55e-62,19;UBERON:0006925,2.55e-62,19;UBERON:0008836,2.55e-62,19;UBERON:0008835,6.24e-54,22;UBERON:0003894,6.24e-54,22;UBERON:0009854,1.28e-51,23;UBERON:0007499,1.50e-47,25;UBERON:0009497,1.50e-47,25;UBERON:0000015,1.50e-47,25;UBERON:0002423,1.50e-47,25;UBERON:0006235,1.50e-47,25;UBERON:0004161,1.50e-47,25;UBERON:0009856,9.44e-46,26;UBERON:0002365,1.73e-38,31;UBERON:0002330,1.73e-38,31;UBERON:0002368,3.60e-34,35;UBERON:0000949,1.01e-26,45;UBERON:0003929,2.29e-22,54;UBERON:0005172,2.29e-22,54;UBERON:0005173,2.29e-22,54;UBERON:0002530,1.61e-20,59;UBERON:0002417,3.46e-20,60;UBERON:0000916,3.46e-20,60;UBERON:0005911,6.57e-15,82;UBERON:0001041,4.44e-14,87;UBERON:0005177,3.45e-12,101;UBERON:0009569,4.95e-11,112;UBERON:0003914,1.41e-10,117;UBERON:0004921,2.09e-10,118;UBERON:0005256,3.69e-10,122;UBERON:0001007,1.51e-08,145;UBERON:0001555,1.51e-08,145;UBERON:0007026,1.51e-08,145;UBERON:0000490,1.95e-08,148;UBERON:0001048,7.94e-08,160;UBERON:0003104,7.94e-08,160;UBERON:0009142,7.94e-08,160;UBERON:0004119,8.84e-08,160;UBERON:0000925,8.84e-08,160;UBERON:0006595,8.84e-08,160 | |||
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|short_description=p7@LRRC20 | |||
}} | }} |
Latest revision as of 01:52, 19 September 2015
Short description: | p7@LRRC20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LRRC20_5end |
Coexpression cluster: | C786_liver_hepatocellular_placenta_hepatoblastoma_normal_Intestinal_Wilms |
Association with transcript: | 57bp_to_AL122117_5end |
EntrezGene: | LRRC20 |
HGNC: | 23421 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.55e-44 | 12 |
endodermal cell | 1.14e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.18e-08 | 39 |