FFCP PHASE1:Hg19::chr7:5567419..5567430,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60 | |EntrezGene=60 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=132 | |HGNC=132 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-96bp_to_BC009636_5end | |association_with_transcript=-96bp_to_BC009636_5end | ||
|cluster_id=chr7:5567419..5567430,- | |||
|description=CAGE_peak_22_at_ACTB_5end | |description=CAGE_peak_22_at_ACTB_5end | ||
|id=chr7:5567419..5567430,- | |id=chr7:5567419..5567430,- | ||
|ontology_enrichment_celltype=CL:0002194!2.06e-10!63;CL:0000576!2.06e-10!63;CL:0000040!2.06e-10!63;CL:0000559!2.06e-10!63;CL:0002009!3.16e-10!65;CL:0000839!3.36e-10!70;CL:0000557!1.02e-09!71;CL:0002057!3.37e-09!42;CL:0000766!7.68e-09!76;CL:0000860!1.92e-08!45;CL:0000763!4.92e-07!112;CL:0000049!4.92e-07!112;CL:0002031!7.83e-07!124 | |ontology_enrichment_celltype=CL:0002194!2.06e-10!63;CL:0000576!2.06e-10!63;CL:0000040!2.06e-10!63;CL:0000559!2.06e-10!63;CL:0002009!3.16e-10!65;CL:0000839!3.36e-10!70;CL:0000557!1.02e-09!71;CL:0002057!3.37e-09!42;CL:0000766!7.68e-09!76;CL:0000860!1.92e-08!45;CL:0000763!4.92e-07!112;CL:0000049!4.92e-07!112;CL:0002031!7.83e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.55e-12;33!CL:0002057;1.55e-12;33!CL:0000473;9.80e-11;39!CL:0000234;9.80e-11;39!CL:0000576;1.46e-09;48!CL:0000766;1.59e-07;69 | |ontology_enrichment_celltype_v019=CL:0000860;1.55e-12;33!CL:0002057;1.55e-12;33!CL:0000473;9.80e-11;39!CL:0000234;9.80e-11;39!CL:0000576;1.46e-09;48!CL:0000766;1.59e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.57e-17,42;CL:0002057,6.57e-17,42;CL:0000473,9.05e-17,48;CL:0000234,9.05e-17,48;CL:0002009,1.25e-16,61;CL:0002194,1.86e-16,59;CL:0000576,1.86e-16,59;CL:0000040,1.86e-16,59;CL:0000559,1.86e-16,59;CL:0000557,3.16e-14,67;CL:0000839,1.16e-13,66;CL:0000766,8.87e-13,72;CL:0002087,5.78e-09,115;CL:0002031,1.10e-08,120;CL:0000763,2.96e-08,108;CL:0000049,2.96e-08,108;CL:0000738,4.22e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002057;6.30e-13;42 | |ontology_enrichment_development_v019=CL:0002057;6.30e-13;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.89e-08!80;UBERON:0001474!1.99e-07!86;UBERON:0004765!2.27e-07!101;UBERON:0001434!2.27e-07!101 | |ontology_enrichment_uberon=UBERON:0002371!1.89e-08!80;UBERON:0001474!1.99e-07!86;UBERON:0004765!2.27e-07!101;UBERON:0001434!2.27e-07!101 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.21e-11,76;UBERON:0001474,1.52e-10,82;UBERON:0002405,2.21e-10,93;UBERON:0001434,1.33e-09,100;UBERON:0004765,2.10e-09,90;UBERON:0002390,8.61e-09,98;UBERON:0003061,8.61e-09,98;UBERON:0002193,2.57e-08,108 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.704772020479856,0,0,0,2.53299878168311,0,0.522371256399677,0.491467873003018,0,0.218441372130172,1.31883489114227,0.37129905888014,0,2.6893005858071,0.602694528023977,0,2.92759679274304,0,0.408001382488506,0.626909442956176,0.85870796139317,0.273748850145768,1.63205431473244,0.687720651731561,0.410502947249729,0.472264687882075,0.786728553697808,0,2.01260960310899,0,0.6024118375565,0,0.309868802321207,0.142169232487422,0.293600439334847,1.10799081706375,0,1.95309783644267,1.79132379391939,0,0.257575567634187,1.45398238779565,1.13362783106643,0.485168122375632,1.39457422143411,1.6446715520873,1.85823822537062,1.43846196161075,1.7931249457037,0.709446689665756,1.72372840368309,1.93645405075148,1.35426486594342,2.44715041405386,1.36453075028923,1.79778787556068,2.14258724659632,0,2.55734850319616,0.329851300186716,1.19678194572979,0,0.580418477257168,1.13477044938228,0.622822248995575,1.25624332628372,1.5644487552606,1.08594422352558,0,0,1.58231193720442,0,1.70083439972035,0,1.90958672949042,0.750884464207532,0,1.42506371870624,1.59133341759272,1.0959849225878,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0,0.790152254325231,0.590129310341499,0,0,0.501559486172034,0.32592226663359,0,0,1.22551502573691,0.294605907474837,0,0.812411591295047,1.40900451698243,1.8208308658383,2.63100647365882,0,0,0.296573126324121,0.535081656179426,0,0.679856056185397,1.14966148080576,0.34362744548263,0.506039384039006,0,0,0,0.150575119077773,0.127986611154418,0,1.4206635122641,0,0.403213486449465,0,1.01377082717959,0,0,1.15076305659177,0,0,0.869079113764942,0,0.486634870302636,0.472674085820339,0.443458794925128,1.14185221401064,0.130979075497713,0,0,1.9472843619281,0.870648686496336,3.98873881556595,0.953962497221368,0,0,0.79504962946682,0.860234595106124,0,0,0,1.6507082516404,1.25396979922086,0.775250277507987,0,0,0.805658634218294,0,2.4406205754817,0,0,0.357198913136319,0.22452937262617,0.788280363383256,0,0,0.366403487860815,0,0,1.3082821564276,5.4666914686485,1.77282716330412,0.397227542439656,0.573673241497627,1.41867352879343,0.560677600142307,0,1.48000529050296,0,0,0.326923806226917,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0.298897361103602,0.469737994575059,0,0,0,0.122834317311768,0.413303124703062,0,0,0,0,0.841680569770331,0.125118519871964,0,0.877955241761676,1.22595118319608,2.10333282469236,2.7223723958405,0,0.640672166455702,0,0,0.103052529238439,0,0,0.843881661206331,0.0974370051611986,0,0,0,0.355009592516614,0.302256294682921,0.169560592310488,0.193260853163297,0,0,0.121973706129595,0,0,0.829288440122964,0,0,0,0.643240938192885,0,0,0,1.0647612003586,0.505754070234305,1.20505514941741,1.32352767278873,1.52515610864684,0.949082476444386,1.48314438976181,0.784885860501384,0.38474715694639,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0.245976877086227,0.171567810298526,0.219500570817251,0,1.3068766413512,1.20364978706088,0,2.07986957055916,0,0.811512834825538,1.40890433082986,0,1.38895653772983,0.190254152234598,0,0,0.492434012174795,0,2.97262324577457,0,0.335964256397719,0.283550194484773,0,0,1.15014803749563,0,0.616339038092582,0.414656231081544,0.432359860250884,0.6312121671319,0.126995788584338,0.381988425558278,0,0,0.616964956219941,0.600686115687835,0.857479297891735,0,0,0.1466765716419,0,0,0,0.531876233169741,2.08014873822732,0.771622122786426,0,0.266422179016099,0.142977993658148,0,0.823240336780769,0,2.13235169245527,0,1.20575750823834,0,3.29910870900788,0,3.01354254859276,0,0,0,0,0.579125226670317,0.205476322550383,0.537182889719687,1.45710687191585,0.197030760201927,0,1.79680250791648,0,0,0,0.167516265334349,1.91381625495949,0,0,0.414415513436035,1.10422342547226,0,0.271265023699736,3.32753378449291,2.67643483195743,2.36553622550902,1.52283839490527,0,0,0,0,0.737476674166813,0.868836144680828,0.195801157462741,0,0,0,0.74709290462411,0,0,0.604780586659361,0,2.30192959932094,0.280660094433074,0,0,4.18220194973379,0,0,0.887808626565635,0.0821271560138091,0,0.464841513839837,0.483437798366489,0,2.11786274552562,1.37777337797528,0,1.83574180943194,0.451199612907412,0.0770153371044148,0,0,0,0,0.680374821106063,0.647747748306418,1.54227252690289,1.35473218771926,0,0,0.831076008928724,2.68649705666614,0.219259876645935,0.261435451024901,0.256450125116389,0.328014645699706,0,0.309123034943167,0.183138929636687,0.082509499920588,0.574265537996172,0,0,0.096670718292122,0.462145851343933,0.614014698904518,0.413509717453592,1.6113036730241,0.435050081742686,0.596586391912706,0.178064071293475,0,0.384380134730212,0,0.708104465988849,0,0,0,0,0,0,0.55597265731176,0,0.744316738719335,0,0.762520775695299,0.511795582622668,0,0.318203247925937,0,0.179872457583315,0.54907405947211,1.41374882814824,0,0,0.842516912477962,0,0,0,0.136499911407986,0.282810863907425,0,0,0.66343897524122,1.31535265576129,0,0.655894752046633,0.405820753925408,1.54911749049875,0.563391205064483,1.00387946542836,1.76848273823618,0,0,1.68886108238131,0,0,0.6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| ||
|short_description=p22@ACTB | |short_description=p22@ACTB | ||
}} | }} |
Latest revision as of 01:55, 19 September 2015
Short description: | p22@ACTB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_ACTB_5end |
Coexpression cluster: | NA |
Association with transcript: | -96bp_to_BC009636_5end |
EntrezGene: | ACTB |
HGNC: | 132 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.57e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.57e-17 | 42 |
defensive cell | 9.05e-17 | 48 |
phagocyte | 9.05e-17 | 48 |
macrophage dendritic cell progenitor | 1.25e-16 | 61 |
monopoietic cell | 1.86e-16 | 59 |
monocyte | 1.86e-16 | 59 |
monoblast | 1.86e-16 | 59 |
promonocyte | 1.86e-16 | 59 |
granulocyte monocyte progenitor cell | 3.16e-14 | 67 |
myeloid lineage restricted progenitor cell | 1.16e-13 | 66 |
myeloid leukocyte | 8.87e-13 | 72 |
nongranular leukocyte | 5.78e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.10e-08 | 120 |
myeloid cell | 2.96e-08 | 108 |
common myeloid progenitor | 2.96e-08 | 108 |
leukocyte | 4.22e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.21e-11 | 76 |
bone element | 1.52e-10 | 82 |
immune system | 2.21e-10 | 93 |
skeletal system | 1.33e-09 | 100 |
skeletal element | 2.10e-09 | 90 |
hematopoietic system | 8.61e-09 | 98 |
blood island | 8.61e-09 | 98 |
hemolymphoid system | 2.57e-08 | 108 |