FFCP PHASE1:Hg19::chr2:97536830..97536841,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:97536830..97536841,-
|short_description=p11@SEMA4C
|description=CAGE_peak_11_at_SEMA4C_5end
|association_with_transcript=-336bp_to_ENST00000449330_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54910 | |EntrezGene=54910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10731 | |HGNC=10731 | ||
|TSSclassifier=strong | |||
|UniProt=C9J4M7 | |UniProt=C9J4M7 | ||
|association_with_transcript=-336bp_to_ENST00000449330_5end | |||
|cluster_id=chr2:97536830..97536841,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_11_at_SEMA4C_5end | |||
|id=chr2:97536830..97536841,- | |||
|ontology_enrichment_celltype=CL:0000148!5.74e-07!10;CL:0000541!5.74e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002567;9.09e-34;3!CL:0000148;6.94e-11;10!CL:0000147;4.82e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,9.10e-34,3;CL:0000148,6.94e-11,10;CL:0000541,6.94e-11,10;CL:0000147,4.82e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0006222;5.92e-26;1!UBERON:0005425;5.92e-26;1!UBERON:0003056;1.41e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p11@SEMA4C | |||
}} | }} |
Latest revision as of 02:07, 19 September 2015
Short description: | p11@SEMA4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SEMA4C_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -336bp_to_ENST00000449330_5end |
EntrezGene: | SEMA4C |
HGNC: | 10731 |
UniProt: | C9J4M7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 9.10e-34 | 3 |
melanocyte | 6.94e-11 | 10 |
melanoblast | 6.94e-11 | 10 |
pigment cell | 4.82e-08 | 14 |