FFCP PHASE1:Hg19::chr7:5568847..5568888,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60 | |EntrezGene=60 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=132 | |HGNC=132 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=142bp_to_uc003sor.3_5end | |association_with_transcript=142bp_to_uc003sor.3_5end | ||
|cluster_id=chr7:5568847..5568888,- | |||
|description=CAGE_peak_18_at_ACTB_5end | |description=CAGE_peak_18_at_ACTB_5end | ||
|id=chr7:5568847..5568888,- | |id=chr7:5568847..5568888,- | ||
|ontology_enrichment_celltype=CL:0000766!5.39e-11!76;CL:0000557!7.68e-11!71;CL:0002057!7.99e-11!42;CL:0002009!8.33e-11!65;CL:0000839!4.48e-10!70;CL:0002194!4.77e-10!63;CL:0000576!4.77e-10!63;CL:0000040!4.77e-10!63;CL:0000559!4.77e-10!63;CL:0000860!2.30e-09!45;CL:0000763!2.75e-08!112;CL:0000049!2.75e-08!112;CL:0000738!2.95e-07!140 | |ontology_enrichment_celltype=CL:0000766!5.39e-11!76;CL:0000557!7.68e-11!71;CL:0002057!7.99e-11!42;CL:0002009!8.33e-11!65;CL:0000839!4.48e-10!70;CL:0002194!4.77e-10!63;CL:0000576!4.77e-10!63;CL:0000040!4.77e-10!63;CL:0000559!4.77e-10!63;CL:0000860!2.30e-09!45;CL:0000763!2.75e-08!112;CL:0000049!2.75e-08!112;CL:0000738!2.95e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000473;3.04e-12;39!CL:0000234;3.04e-12;39!CL:0000860;3.37e-12;33!CL:0002057;3.37e-12;33!CL:0000766;1.42e-08;69!CL:0000576;1.98e-08;48 | |ontology_enrichment_celltype_v019=CL:0000473;3.04e-12;39!CL:0000234;3.04e-12;39!CL:0000860;3.37e-12;33!CL:0002057;3.37e-12;33!CL:0000766;1.42e-08;69!CL:0000576;1.98e-08;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000557,8.70e-16,67;CL:0000473,1.05e-15,48;CL:0000234,1.05e-15,48;CL:0000766,1.05e-15,72;CL:0002009,9.37e-15,61;CL:0000839,3.66e-14,66;CL:0000860,1.39e-13,42;CL:0002057,1.39e-13,42;CL:0002194,1.48e-13,59;CL:0000576,1.48e-13,59;CL:0000040,1.48e-13,59;CL:0000559,1.48e-13,59;CL:0000763,7.07e-12,108;CL:0000049,7.07e-12,108;CL:0000738,1.46e-09,136;CL:0002031,5.14e-08,120;CL:0002032,3.04e-07,161;CL:0000837,3.04e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;5.58e-10;42 | |ontology_enrichment_development_v019=CL:0002057;5.58e-10;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.04e-10!80;UBERON:0002204!2.54e-09!167;UBERON:0004765!2.72e-09!101;UBERON:0001434!2.72e-09!101;UBERON:0001474!4.07e-09!86;UBERON:0002405!3.11e-08!115;UBERON:0002390!2.36e-07!102;UBERON:0003061!2.36e-07!102;UBERON:0003081!2.53e-07!216;UBERON:0002193!8.95e-07!112 | |ontology_enrichment_uberon=UBERON:0002371!5.04e-10!80;UBERON:0002204!2.54e-09!167;UBERON:0004765!2.72e-09!101;UBERON:0001434!2.72e-09!101;UBERON:0001474!4.07e-09!86;UBERON:0002405!3.11e-08!115;UBERON:0002390!2.36e-07!102;UBERON:0003061!2.36e-07!102;UBERON:0003081!2.53e-07!216;UBERON:0002193!8.95e-07!112 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.12e-14,76;UBERON:0001474,3.54e-14,82;UBERON:0002405,1.66e-12,93;UBERON:0004765,2.05e-12,90;UBERON:0003081,4.14e-12,203;UBERON:0001434,6.22e-12,100;UBERON:0002204,8.26e-12,167;UBERON:0002390,1.64e-10,98;UBERON:0003061,1.64e-10,98;UBERON:0002193,7.66e-10,108 | |||
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| ||
|short_description=p18@ACTB | |short_description=p18@ACTB | ||
}} | }} |
Latest revision as of 02:08, 19 September 2015
Short description: | p18@ACTB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_ACTB_5end |
Coexpression cluster: | NA |
Association with transcript: | 142bp_to_uc003sor.3_5end |
EntrezGene: | ACTB |
HGNC: | 132 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 8.70e-16 | 67 |
defensive cell | 1.05e-15 | 48 |
phagocyte | 1.05e-15 | 48 |
myeloid leukocyte | 1.05e-15 | 72 |
macrophage dendritic cell progenitor | 9.37e-15 | 61 |
myeloid lineage restricted progenitor cell | 3.66e-14 | 66 |
classical monocyte | 1.39e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.39e-13 | 42 |
monopoietic cell | 1.48e-13 | 59 |
monocyte | 1.48e-13 | 59 |
monoblast | 1.48e-13 | 59 |
promonocyte | 1.48e-13 | 59 |
myeloid cell | 7.07e-12 | 108 |
common myeloid progenitor | 7.07e-12 | 108 |
leukocyte | 1.46e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 5.14e-08 | 120 |
hematopoietic oligopotent progenitor cell | 3.04e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.04e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.12e-14 | 76 |
bone element | 3.54e-14 | 82 |
immune system | 1.66e-12 | 93 |
skeletal element | 2.05e-12 | 90 |
lateral plate mesoderm | 4.14e-12 | 203 |
skeletal system | 6.22e-12 | 100 |
musculoskeletal system | 8.26e-12 | 167 |
hematopoietic system | 1.64e-10 | 98 |
blood island | 1.64e-10 | 98 |
hemolymphoid system | 7.66e-10 | 108 |