FFCP PHASE1:Hg19::chr7:5568847..5568888,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=60 | |EntrezGene=60 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC=132 | |HGNC=132 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=142bp_to_uc003sor.3_5end | |association_with_transcript=142bp_to_uc003sor.3_5end | ||
|cluster_id=chr7:5568847..5568888,- | |||
|description=CAGE_peak_18_at_ACTB_5end | |description=CAGE_peak_18_at_ACTB_5end | ||
|id=chr7:5568847..5568888,- | |id=chr7:5568847..5568888,- |
Latest revision as of 02:08, 19 September 2015
Short description: | p18@ACTB |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_ACTB_5end |
Coexpression cluster: | NA |
Association with transcript: | 142bp_to_uc003sor.3_5end |
EntrezGene: | ACTB |
HGNC: | 132 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p18@ACTB |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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granulocyte monocyte progenitor cell | 8.70e-16 | 67 |
defensive cell | 1.05e-15 | 48 |
phagocyte | 1.05e-15 | 48 |
myeloid leukocyte | 1.05e-15 | 72 |
macrophage dendritic cell progenitor | 9.37e-15 | 61 |
myeloid lineage restricted progenitor cell | 3.66e-14 | 66 |
classical monocyte | 1.39e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.39e-13 | 42 |
monopoietic cell | 1.48e-13 | 59 |
monocyte | 1.48e-13 | 59 |
Showing 1 to 10 of 18 entries
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.12e-14 | 76 |
bone element | 3.54e-14 | 82 |
immune system | 1.66e-12 | 93 |
skeletal element | 2.05e-12 | 90 |
lateral plate mesoderm | 4.14e-12 | 203 |
skeletal system | 6.22e-12 | 100 |
musculoskeletal system | 8.26e-12 | 167 |
hematopoietic system | 1.64e-10 | 98 |
blood island | 1.64e-10 | 98 |
hemolymphoid system | 7.66e-10 | 108 |
Showing 1 to 10 of 10 entries