FFCP PHASE1:Hg19::chr11:64490531..64490542,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9379 | |EntrezGene=9379 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8009 | |HGNC=8009 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P2S2,F8W812 | |UniProt=Q9P2S2,F8W812 | ||
|association_with_transcript=117bp_to_ENST00000265459,ENST00000345863,ENST00000377559,NM_015080,NM_138732_5end | |association_with_transcript=117bp_to_ENST00000265459,ENST00000345863,ENST00000377559,NM_015080,NM_138732_5end | ||
|cluster_id=chr11:64490531..64490542,- | |||
|coexpression_cluster_id=C734 | |coexpression_cluster_id=C734 | ||
|description=CAGE_peak_15_at_NRXN2_5end | |description=CAGE_peak_15_at_NRXN2_5end | ||
Latest revision as of 04:03, 19 September 2015
| Short description: | p15@NRXN2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_15_at_NRXN2_5end |
| Coexpression cluster: | C734_brain_occipital_parietal_middle_medial_frontal_hippocampus |
| Association with transcript: | 117bp_to_ENST00000265459, ENST00000345863, ENST00000377559, NM_015080, NM_138732_5end |
| EntrezGene: | NRXN2 |
| HGNC: | 8009 |
| UniProt: | Q9P2S2F8W812 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p15@NRXN2 |
|---|
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3.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| occipital lobe | 3.33e-40 | 5 |
| neocortex | 1.61e-37 | 20 |
| regional part of cerebral cortex | 2.79e-34 | 22 |
| cerebral cortex | 2.37e-30 | 25 |
| pallium | 2.37e-30 | 25 |
| regional part of nervous system | 7.84e-26 | 53 |
| regional part of brain | 7.84e-26 | 53 |
| neural tube | 1.80e-24 | 56 |
| neural rod | 1.80e-24 | 56 |
| future spinal cord | 1.80e-24 | 56 |
Showing 1 to 10 of 62 entries
