FFCP PHASE1:Hg19::chr22:19950758..19950799,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr22:19950758..19950799,+
|short_description=p13@COMT
|description=CAGE_peak_13_at_COMT_5end
|association_with_transcript=-68bp_to_ENST00000493893_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1312 | |EntrezGene=1312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2228 | |HGNC=2228 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-68bp_to_ENST00000493893_5end | |||
|cluster_id=chr22:19950758..19950799,+ | |||
|description=CAGE_peak_13_at_COMT_5end | |||
|id=chr22:19950758..19950799,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.38e-27!254;CL:0002076!1.94e-23!43;CL:0000223!1.74e-19!59;CL:0002368!1.26e-11!13;CL:0002251!2.84e-10!21;CL:0002202!1.62e-08!9;CL:0002632!1.62e-08!9;CL:0002159!5.19e-07!13;CL:0002327!9.59e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000349;4.92e-16;19!CL:0002327;8.52e-14;4!CL:0002577;9.20e-11;3!CL:0002076;4.39e-10;42!CL:0002251;8.75e-09;20!CL:0002536;3.29e-08;2!CL:0000575;7.28e-08;2!CL:0002537;6.57e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.44e-17,253;CL:0000349,3.60e-16,19;CL:0002327,1.52e-13,4;CL:0002076,1.48e-11,42;CL:0002577,8.25e-11,3;CL:0000223,3.90e-10,58;CL:0002251,1.13e-08,20;CL:0002536,3.36e-08,2;CL:0000575,8.36e-08,2;CL:0002537,5.69e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.54e-14!106;DOID:0050687!2.85e-11!143;DOID:299!4.76e-10!25;DOID:1749!7.56e-09!14;DOID:7!1.39e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:299;1.00e-08;25!DOID:5093;8.21e-08;4!DOID:1612;8.21e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:299,8.10e-09,25;DOID:5093,4.72e-08,4;DOID:1612,4.72e-08,4;DOID:305,5.56e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.93e-19!169;UBERON:0000925!5.93e-19!169;UBERON:0006595!5.93e-19!169;UBERON:0001007!3.14e-13!155;UBERON:0001555!3.14e-13!155;UBERON:0007026!3.14e-13!155;UBERON:0005631!4.40e-12!14;UBERON:0000158!4.40e-12!14;UBERON:0000466!1.73e-11!126;UBERON:0005911!2.31e-11!82;UBERON:0000077!3.46e-11!130;UBERON:0000464!3.73e-10!104;UBERON:0000161!6.91e-10!35;UBERON:0004921!1.31e-09!129;UBERON:0004185!1.31e-09!129;UBERON:0005153!2.31e-09!37;UBERON:0001004!2.49e-09!72;UBERON:0000478!2.85e-09!24;UBERON:0006554!3.12e-09!44;UBERON:0001008!6.93e-09!45;UBERON:0000058!1.35e-08!26;UBERON:0005177!2.24e-08!107;UBERON:0009569!2.63e-08!113;UBERON:0003124!7.14e-08!7;UBERON:0007196!7.84e-08!14;UBERON:0001558!7.84e-08!14;UBERON:0003104!8.27e-08!238;UBERON:0009142!8.27e-08!238;UBERON:0003064!1.29e-07!37;UBERON:0002100!3.32e-07!216;UBERON:0003929!3.77e-07!54;UBERON:0005157!4.92e-07!51;UBERON:0005178!6.45e-07!34;UBERON:0002224!6.45e-07!34;UBERON:0001987!6.63e-07!4;UBERON:0004340!6.63e-07!4;UBERON:0000344!9.48e-07!12;UBERON:0001911!9.59e-07!4;UBERON:0005333!9.59e-07!4;UBERON:0008425!9.59e-07!4;UBERON:0005311!9.59e-07!4;UBERON:0000166!9.84e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;8.71e-18;24!UBERON:0005631;4.70e-16;10!UBERON:0000158;4.70e-16;10!UBERON:0001911;8.52e-14;4!UBERON:0001987;9.10e-14;4!UBERON:0000305;1.37e-12;7!UBERON:0003127;5.24e-07;2!UBERON:0003100;7.90e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.31e-27,14;UBERON:0000158,1.31e-27,14;UBERON:0000478,5.74e-18,24;UBERON:0003124,9.12e-17,7;UBERON:0001987,6.50e-14,4;UBERON:0004340,6.50e-14,4;UBERON:0001911,1.52e-13,4;UBERON:0005333,1.52e-13,4;UBERON:0008425,1.52e-13,4;UBERON:0005311,1.52e-13,4;UBERON:0000305,1.17e-12,7;UBERON:0004871,5.07e-11,8;UBERON:0004923,3.74e-10,66;UBERON:0004119,4.89e-09,160;UBERON:0000925,4.89e-09,160;UBERON:0006595,4.89e-09,160;UBERON:0003100,5.90e-09,41;UBERON:0006554,8.46e-09,47;UBERON:0005157,9.26e-09,47;UBERON:0001008,1.48e-08,48;UBERON:0005153,2.75e-08,37;UBERON:0003127,8.62e-07,2;UBERON:0000076,9.05e-07,8 | |||
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| ||
|short_description=p13@COMT | |||
}} | }} |
Latest revision as of 04:09, 19 September 2015
Short description: | p13@COMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_COMT_5end |
Coexpression cluster: | NA |
Association with transcript: | -68bp_to_ENST00000493893_5end |
EntrezGene: | COMT |
HGNC: | 2228 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.44e-17 | 253 |
extraembryonic cell | 3.60e-16 | 19 |
mammary gland epithelial cell | 1.52e-13 | 4 |
endo-epithelial cell | 1.48e-11 | 42 |
placental epithelial cell | 8.25e-11 | 3 |
endodermal cell | 3.90e-10 | 58 |
epithelial cell of alimentary canal | 1.13e-08 | 20 |
amniotic epithelial cell | 3.36e-08 | 2 |
corneal epithelial cell | 8.36e-08 | 2 |
amnion mesenchymal stem cell | 5.69e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.31e-27 | 14 |
membranous layer | 1.31e-27 | 14 |
extraembryonic structure | 5.74e-18 | 24 |
chorion | 9.12e-17 | 7 |
placenta | 6.50e-14 | 4 |
allantois | 6.50e-14 | 4 |
mammary gland | 1.52e-13 | 4 |
mammary bud | 1.52e-13 | 4 |
mammary ridge | 1.52e-13 | 4 |
mammary placode | 1.52e-13 | 4 |
amnion | 1.17e-12 | 7 |
somatic layer of lateral plate mesoderm | 5.07e-11 | 8 |
organ component layer | 3.74e-10 | 66 |
endoderm-derived structure | 4.89e-09 | 160 |
endoderm | 4.89e-09 | 160 |
presumptive endoderm | 4.89e-09 | 160 |
female organism | 5.90e-09 | 41 |
urinary system structure | 8.46e-09 | 47 |
epithelial fold | 9.26e-09 | 47 |
renal system | 1.48e-08 | 48 |
epithelial bud | 2.75e-08 | 37 |
open tracheal system trachea | 8.62e-07 | 2 |
external ectoderm | 9.05e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 8.10e-09 | 25 |
thoracic cancer | 4.72e-08 | 4 |
breast cancer | 4.72e-08 | 4 |
carcinoma | 5.56e-08 | 106 |