FFCP PHASE1:Hg19::chr6:50786529..50786540,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7021 | |EntrezGene=7021 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11743 | |HGNC=11743 | ||
|TSSclassifier=strong | |||
|UniProt=Q92481 | |UniProt=Q92481 | ||
|association_with_transcript=90bp_to_ENST00000263046,NM_003221,uc003pag.2_5end | |association_with_transcript=90bp_to_ENST00000263046,NM_003221,uc003pag.2_5end | ||
|cluster_id=chr6:50786529..50786540,+ | |||
|coexpression_cluster_id=C108 | |coexpression_cluster_id=C108 | ||
|description=CAGE_peak_8_at_TFAP2B_5end | |description=CAGE_peak_8_at_TFAP2B_5end | ||
|id=chr6:50786529..50786540,+ | |id=chr6:50786529..50786540,+ | ||
|ontology_enrichment_celltype=CL:0000075!1.60e-18!27;CL:0000242!2.14e-12!2;CL:0002077!5.04e-12!33;CL:0002322!1.62e-10!5;CL:0000312!1.73e-10!5;CL:0000325!9.00e-10!39;CL:0000710!1.97e-09!20;CL:0000133!5.93e-09!59;CL:0000197!6.56e-09!6;CL:0000098!6.56e-09!6;CL:0002167!6.56e-09!6;CL:0000240!8.13e-09!6;CL:0000311!8.13e-09!6;CL:0000079!8.13e-09!6;CL:0000237!8.13e-09!6;CL:0000036!8.13e-09!6;CL:0000357!8.13e-09!6;CL:0000114!8.13e-09!6;CL:0000221!1.55e-08!71;CL:0000239!1.97e-08!3;CL:1000615!1.97e-08!3;CL:0002306!1.97e-08!3;CL:0000333!3.93e-07!41 | |ontology_enrichment_celltype=CL:0000075!1.60e-18!27;CL:0000242!2.14e-12!2;CL:0002077!5.04e-12!33;CL:0002322!1.62e-10!5;CL:0000312!1.73e-10!5;CL:0000325!9.00e-10!39;CL:0000710!1.97e-09!20;CL:0000133!5.93e-09!59;CL:0000197!6.56e-09!6;CL:0000098!6.56e-09!6;CL:0002167!6.56e-09!6;CL:0000240!8.13e-09!6;CL:0000311!8.13e-09!6;CL:0000079!8.13e-09!6;CL:0000237!8.13e-09!6;CL:0000036!8.13e-09!6;CL:0000357!8.13e-09!6;CL:0000114!8.13e-09!6;CL:0000221!1.55e-08!71;CL:0000239!1.97e-08!3;CL:1000615!1.97e-08!3;CL:0002306!1.97e-08!3;CL:0000333!3.93e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0000333;6.99e-21;5!CL:0002321;1.48e-15;15!CL:0000123;8.28e-14;2!CL:0000242;8.28e-14;2!CL:0000239;1.67e-09;3!CL:1000615;1.67e-09;3!CL:0002306;1.67e-09;3!CL:0002327;1.31e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,8.28e-14,2;CL:0000333,1.15e-09,41;CL:0000239,1.54e-09,3;CL:1000615,1.54e-09,3;CL:0002306,1.54e-09,3;CL:0002327,1.31e-07,4;CL:0000133,6.36e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.16e-26;1!UBERON:0007297;1.37e-13;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;5.13e-23;10!DOID:169;1.38e-17;6!DOID:3193;7.30e-14;2!DOID:962;7.30e-14;2!DOID:3095;7.16e-11;22!DOID:2994;7.16e-11;22!DOID:1192;1.10e-09;3!DOID:5093;1.31e-07;4!DOID:1612;1.31e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:171,5.13e-23,10;DOID:169,1.44e-17,6;DOID:3193,7.30e-14,2;DOID:962,7.30e-14,2;DOID:3095,7.16e-11,22;DOID:2994,7.16e-11,22;DOID:1192,1.10e-09,3;DOID:5093,1.31e-07,4;DOID:1612,1.31e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000970!2.72e-09!20;UBERON:0002104!8.04e-09!21;UBERON:0006853!1.97e-08!3;UBERON:0007685!1.97e-08!3;UBERON:0004134!1.97e-08!3;UBERON:0000020!5.29e-08!23;UBERON:0000924!5.34e-08!173;UBERON:0006601!5.34e-08!173;UBERON:0001032!1.20e-07!24;UBERON:0004456!1.20e-07!24;UBERON:0001444!1.53e-07!48;UBERON:0004121!2.97e-07!169;UBERON:0001301!4.18e-07!1;UBERON:0000019!6.23e-07!19;UBERON:0000047!6.23e-07!19;UBERON:0004088!6.23e-07!19;UBERON:0003072!6.23e-07!19;UBERON:0003071!6.23e-07!19;UBERON:0004128!6.23e-07!19 | |ontology_enrichment_uberon=UBERON:0000970!2.72e-09!20;UBERON:0002104!8.04e-09!21;UBERON:0006853!1.97e-08!3;UBERON:0007685!1.97e-08!3;UBERON:0004134!1.97e-08!3;UBERON:0000020!5.29e-08!23;UBERON:0000924!5.34e-08!173;UBERON:0006601!5.34e-08!173;UBERON:0001032!1.20e-07!24;UBERON:0004456!1.20e-07!24;UBERON:0001444!1.53e-07!48;UBERON:0004121!2.97e-07!169;UBERON:0001301!4.18e-07!1;UBERON:0000019!6.23e-07!19;UBERON:0000047!6.23e-07!19;UBERON:0004088!6.23e-07!19;UBERON:0003072!6.23e-07!19;UBERON:0003071!6.23e-07!19;UBERON:0004128!6.23e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;9.79e-26;1!UBERON:0000013;6.99e-21;5!UBERON:0002410;6.99e-21;5!UBERON:0003714;7.30e-14;2!UBERON:0000010;4.54e-12;8!UBERON:0006853;1.67e-09;3!UBERON:0007685;1.67e-09;3!UBERON:0004134;1.67e-09;3!UBERON:0006947;1.67e-09;3!UBERON:0004054;1.67e-09;3!UBERON:0001911;1.31e-07;4!UBERON:0002346;1.64e-07;4!UBERON:0000923;1.64e-07;4!UBERON:0010316;1.64e-07;4!UBERON:0005291;1.64e-07;4!UBERON:0005904;1.92e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,9.79e-26,1;UBERON:0000013,7.35e-21,5;UBERON:0002410,7.35e-21,5;UBERON:0003714,7.30e-14,2;UBERON:0000010,4.67e-12,8;UBERON:0006853,1.54e-09,3;UBERON:0007685,1.54e-09,3;UBERON:0004134,1.54e-09,3;UBERON:0006947,1.67e-09,3;UBERON:0004054,1.67e-09,3;UBERON:0001911,1.31e-07,4;UBERON:0005333,1.31e-07,4;UBERON:0008425,1.31e-07,4;UBERON:0005311,1.31e-07,4;UBERON:0005904,1.92e-07,4;UBERON:0006555,4.14e-07,16;UBERON:0004819,4.14e-07,16 | |||
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|short_description=p8@TFAP2B | |short_description=p8@TFAP2B | ||
}} | }} |
Latest revision as of 05:23, 19 September 2015
Short description: | p8@TFAP2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TFAP2B_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | 90bp_to_ENST00000263046, NM_003221, uc003pag.2_5end |
EntrezGene: | TFAP2B |
HGNC: | 11743 |
UniProt: | Q92481 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 8.28e-14 | 2 |
migratory neural crest cell | 1.15e-09 | 41 |
brush border epithelial cell | 1.54e-09 | 3 |
kidney cortex tubule cell | 1.54e-09 | 3 |
epithelial cell of proximal tubule | 1.54e-09 | 3 |
mammary gland epithelial cell | 1.31e-07 | 4 |
neurectodermal cell | 6.36e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
epididymis | 9.79e-26 | 1 |
sympathetic nervous system | 7.35e-21 | 5 |
autonomic nervous system | 7.35e-21 | 5 |
neural tissue | 7.30e-14 | 2 |
peripheral nervous system | 4.67e-12 | 8 |
renal cortex tubule | 1.54e-09 | 3 |
region of nephron tubule | 1.54e-09 | 3 |
proximal tubule | 1.54e-09 | 3 |
male genital duct | 1.67e-09 | 3 |
internal male genitalia | 1.67e-09 | 3 |
mammary gland | 1.31e-07 | 4 |
mammary bud | 1.31e-07 | 4 |
mammary ridge | 1.31e-07 | 4 |
mammary placode | 1.31e-07 | 4 |
duct of male reproductive system | 1.92e-07 | 4 |
excretory tube | 4.14e-07 | 16 |
kidney epithelium | 4.14e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 5.13e-23 | 10 |
neuroendocrine tumor | 1.44e-17 | 6 |
peripheral nerve sheath neoplasm | 7.30e-14 | 2 |
neurofibroma | 7.30e-14 | 2 |
germ cell and embryonal cancer | 7.16e-11 | 22 |
germ cell cancer | 7.16e-11 | 22 |
peripheral nervous system neoplasm | 1.10e-09 | 3 |
thoracic cancer | 1.31e-07 | 4 |
breast cancer | 1.31e-07 | 4 |