FFCP PHASE1:Hg19::chr8:82644655..82644687,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79752 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25858 | |||
|TSSclassifier=strong | |||
|UniProt=E5RJ74 | |||
|association_with_transcript=-13bp_to_ENST00000520635_5end | |||
|cluster_id=chr8:82644655..82644687,- | |||
|coexpression_cluster_id=C2015 | |||
|description=CAGE_peak_3_at_ZFAND1_5end | |||
|id=chr8:82644655..82644687,- | |||
|ontology_enrichment_celltype=CL:0000066!5.98e-43!254;CL:0000223!2.94e-23!59;CL:0002076!5.16e-20!43;CL:0002251!2.62e-10!21;CL:0000082!4.56e-09!19;CL:0002368!9.30e-09!13;CL:0000039!3.77e-07!7;CL:0000586!3.77e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002076;8.71e-15;42!CL:0000082;9.03e-13;19!CL:0002251;1.21e-11;20!CL:0002368;2.77e-10;13!CL:0002178;3.83e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.08e-29,253;CL:0000223,3.07e-21,58;CL:0002076,1.02e-18,42;CL:0000082,5.13e-13,19;CL:0002251,1.14e-11,20;CL:0002368,3.04e-10,13;CL:0002178,3.50e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.55e-15;30!CL:0000223;2.12e-11;58 | |||
|ontology_enrichment_disease=DOID:305!1.05e-44!106;DOID:0050687!2.44e-37!143;DOID:162!4.82e-21!235;DOID:14566!5.35e-21!239;DOID:1749!5.10e-13!14;DOID:299!1.99e-09!25;DOID:0050615!7.09e-09!16;DOID:1324!6.82e-08!15;DOID:3119!8.40e-08!14;DOID:7!3.03e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.14e-19;14!DOID:0050615;4.43e-16;16!DOID:1324;4.42e-14;15!DOID:3119;1.06e-11;14!DOID:305;2.50e-11;106!DOID:4362;1.29e-10;5!DOID:299;2.57e-10;25!DOID:3905;1.64e-09;9!DOID:3908;6.02e-08;5!DOID:4556;1.11e-07;3!DOID:0050687;2.22e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.43e-41,106;DOID:0050687,2.23e-34,143;DOID:162,1.53e-22,235;DOID:14566,9.87e-22,239;DOID:1749,1.78e-19,14;DOID:0050615,2.53e-16,16;DOID:1324,2.56e-14,15;DOID:3119,1.51e-11,14;DOID:4362,1.89e-10,5;DOID:299,2.69e-10,25;DOID:3905,1.15e-09,9;DOID:0050686,2.86e-08,137;DOID:3908,3.92e-08,5;DOID:4556,6.13e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.36e-26!169;UBERON:0000925!2.36e-26!169;UBERON:0006595!2.36e-26!169;UBERON:0001007!3.77e-23!155;UBERON:0001555!3.77e-23!155;UBERON:0007026!3.77e-23!155;UBERON:0004921!1.93e-19!129;UBERON:0004185!1.93e-19!129;UBERON:0005911!3.76e-19!82;UBERON:0000077!2.75e-16!130;UBERON:0000466!2.49e-14!126;UBERON:0005153!1.10e-13!37;UBERON:0001041!1.72e-13!98;UBERON:0005177!8.21e-13!107;UBERON:0001004!1.53e-12!72;UBERON:0000464!9.90e-12!104;UBERON:0000065!1.01e-10!53;UBERON:0008947!1.06e-10!38;UBERON:0003258!1.06e-10!38;UBERON:0002048!2.45e-10!22;UBERON:0000117!2.45e-10!22;UBERON:0000171!2.45e-10!22;UBERON:0000170!2.45e-10!22;UBERON:0005597!2.45e-10!22;UBERON:0000118!2.45e-10!22;UBERON:0005178!3.95e-10!34;UBERON:0002224!3.95e-10!34;UBERON:0000344!4.78e-10!12;UBERON:0005181!1.23e-09!35;UBERON:0001048!1.98e-09!168;UBERON:0004802!4.56e-09!19;UBERON:0000115!4.56e-09!19;UBERON:0003929!4.76e-09!54;UBERON:0005157!5.21e-09!51;UBERON:0009569!4.18e-08!113;UBERON:0004807!1.52e-07!28;UBERON:0006554!1.73e-07!44;UBERON:0003104!2.31e-07!238;UBERON:0009142!2.31e-07!238;UBERON:0001008!3.61e-07!45;UBERON:0005409!4.09e-07!35;UBERON:0000072!4.66e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;9.03e-13;19!UBERON:0000115;9.03e-13;19!UBERON:0004807;1.15e-12;22!UBERON:0005911;1.46e-12;36!UBERON:0002048;1.13e-10;22!UBERON:0000117;1.13e-10;22!UBERON:0000171;1.13e-10;22!UBERON:0000170;1.13e-10;22!UBERON:0000002;8.70e-09;6!UBERON:0001560;8.70e-09;6!UBERON:0000344;5.45e-08;20!UBERON:0005181;1.13e-07;35!UBERON:0005178;1.57e-07;34!UBERON:0002224;1.57e-07;34!UBERON:0000065;6.40e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.71e-18,160;UBERON:0000925,2.71e-18,160;UBERON:0006595,2.71e-18,160;UBERON:0005911,3.57e-16,82;UBERON:0001007,8.37e-14,145;UBERON:0001555,8.37e-14,145;UBERON:0007026,8.37e-14,145;UBERON:0004921,1.63e-13,118;UBERON:0004802,5.13e-13,19;UBERON:0000115,5.13e-13,19;UBERON:0005153,2.57e-12,37;UBERON:0002048,7.03e-11,22;UBERON:0000117,7.03e-11,22;UBERON:0000171,7.03e-11,22;UBERON:0000170,7.03e-11,22;UBERON:0005597,7.03e-11,22;UBERON:0000118,7.03e-11,22;UBERON:0001004,9.46e-11,74;UBERON:0001041,2.30e-10,87;UBERON:0000065,1.57e-09,54;UBERON:0004807,1.70e-09,28;UBERON:0005157,7.94e-09,47;UBERON:0005178,1.13e-08,34;UBERON:0002224,1.13e-08,34;UBERON:0000002,1.19e-08,6;UBERON:0001560,1.19e-08,6;UBERON:0005181,2.45e-08,35;UBERON:0000344,4.84e-08,20;UBERON:0008947,1.93e-07,38;UBERON:0003258,1.93e-07,38 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,0,0,0,0.919421224478927,0.30120591877825,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468642863667593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,0.818238361772504,0.860413786167011,0.487894824518382,0,0.232387885739037,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0.220587945464788,0,0,0,0,0.38474715694639,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0.860919069801795,0,0.219500570817251,0,0.703702806881416,1.85176890317059,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0.93733833986777,1.34385702559088,0.708875486211932,2.14940454486836,2.90633938513962,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0.601519410909855,6.07734526976916,0,0,0.131124414959424,0,1.46329140498388,0.784349769176855,0,0.633309773357254,0,0,0,0,0,0.501689773854853,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0.256450125116389,0,0.325378394664303,0.721287081534056,0.0915694648183434,0,0.574265537996172,1.30012049207304,0,0,0,0,0,0,0,0,0,3.96683796866347,3.2672311452068,1.40373983744043,5.36136238534415,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,0,2.4055528181378,0.670302275535787,1.08890984861323,0.282431402330337,0,0,1.7737206141467,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.7428108081644,0,0,0,0,0.71623345421307,0.593929361665277,1.22864280839693,0,0,0.111308705022906,0,0,0.19924798825107,0,1.0077309914171,0,0,0,1.88723537409386,1.43216939740487,0,0,0,0,0,0,0,2.86470537193757,0.787139999965761,0,2.61724931056649,5.33932665614809,0.236387681767936,3.10269035917318,0,0,0,0,0,0,0,0,1.0893846351899,2.78847488557207,0,0,2.53620294826866,1.6156375993759,0.977826347298073,0.957003479195758,0.274792780205587,0,0,0,0.166211681900156,1.1279783030859,0.392125068635479,0.839107934879214,0,0,0.843992258112108,0.816164040795739,1.13082457147153,3.67860687561555,0.995261931078505,0.353830258013357,0,0,0,0,0,0,0,0,5.86993856796269,0,0,0,0,0,11.5749032949159,0.311064574191741,0.664653872707185,0,0.313932918407225,0,1.42304773014896,0.138674673013139,0.173559738335131,1.7638631534588,1.74118413160805,0.17472666824203,0,0.483781656445426,1.75414361006845,0.410577285266046,0.290967049465258,0,0.225980740780532,0,0,0,1.56441106187842,0.881747022766871,0,1.9980960958213,1.00863292007874,0,0.686379991447858,3.60136994970374,1.36677789121976,3.53541051925193,0,0,0,0,0,0,0,0,0,0,0,0,1.19807400299395,0,0,0,0,2.32991899054908,1.02418136999391,1.07140615895516,0.337017719270924,0.984274815147488,0.846733320657845,0,0,0.160753148465019,0.687697182986169,0.415440338029185,0,0,0,0.670869375198532,0.394028536495991,0.157363764404994,2.64000841298516,1.79287339332845,5.9493711169028,0,0,0,0,0,0,0,0.410462603746695,0,0,0,1.32506888912221,0,0,1.71086837884329,1.40963004463334,0.106787412567695,0.157204305099666,0.828478110694391,0,0,0,5.10673006216145,0,0,0,0,8.32386710126242,0,0,0,0,0,0,0,0.124980407962107,0,0,1.41159491818903,0,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,1.63804924423206,0,5.70542733068293,0,0,1.54993481694734,0,0,8.53264997088611,3.11038630016486,0,0,0.471797825567689,0,0,0,0.247871528518004,0,0,0,2.40171224485641,0,0,0,0,0,0,0,0,0,0,5.59441995455846,6.01645589073476,0.917142992608395,3.46576998451015,0,0,0,0,0.40341013740704,0.781514011233092,0.785720083444267,0.163771917510097,1.18284868973636,0,0,0,0,0,2.19303106742873,0,0,3.06629826335029,0,0,0.606965604236632,1.13831095675649,0,1.26757386311357,0,0,0,1.53651993149159,1.22354542081276,0.470958557103084,0,4.48435461302062,0.913158720509496,0.431855182437243,0.9555033757741,0,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0.423387050190929,0.22910686854405,0,0,0.671132590786754,2.65005630761156,0,0,0,0,0,1.40363678077263,0.198950775161368,0,13.3276376805973,0,19.3232439765342,0.231522474323834,0.437119121007915,3.29222107453066,0.245148321753905,2.12108892391463,0,0,0,0,0,0,0,7.32071148283196,12.3513205100492,3.12941330087756,0.730336388246517,0.917458566809082,0,0,0,0,1.0580536810308,0,0,0,0.378499274505237,0.437062287854782,0,0.917899467677836,0.53443481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| |||
|short_description=p3@ZFAND1 | |||
}} |
Latest revision as of 06:32, 19 September 2015
Short description: | p3@ZFAND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZFAND1_5end |
Coexpression cluster: | C2015_small_squamous_amniotic_rectal_malignant_maxillary_oral |
Association with transcript: | -13bp_to_ENST00000520635_5end |
EntrezGene: | ZFAND1 |
HGNC: | 25858 |
UniProt: | E5RJ74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.08e-29 | 253 |
endodermal cell | 3.07e-21 | 58 |
endo-epithelial cell | 1.02e-18 | 42 |
epithelial cell of lung | 5.13e-13 | 19 |
epithelial cell of alimentary canal | 1.14e-11 | 20 |
respiratory epithelial cell | 3.04e-10 | 13 |
epithelial cell of stomach | 3.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.71e-18 | 160 |
endoderm | 2.71e-18 | 160 |
presumptive endoderm | 2.71e-18 | 160 |
endo-epithelium | 3.57e-16 | 82 |
digestive system | 8.37e-14 | 145 |
digestive tract | 8.37e-14 | 145 |
primitive gut | 8.37e-14 | 145 |
subdivision of digestive tract | 1.63e-13 | 118 |
respiratory tract epithelium | 5.13e-13 | 19 |
lung epithelium | 5.13e-13 | 19 |
epithelial bud | 2.57e-12 | 37 |
lung | 7.03e-11 | 22 |
respiratory tube | 7.03e-11 | 22 |
respiration organ | 7.03e-11 | 22 |
pair of lungs | 7.03e-11 | 22 |
lung primordium | 7.03e-11 | 22 |
lung bud | 7.03e-11 | 22 |
respiratory system | 9.46e-11 | 74 |
foregut | 2.30e-10 | 87 |
respiratory tract | 1.57e-09 | 54 |
respiratory system epithelium | 1.70e-09 | 28 |
epithelial fold | 7.94e-09 | 47 |
thoracic cavity element | 1.13e-08 | 34 |
thoracic cavity | 1.13e-08 | 34 |
uterine cervix | 1.19e-08 | 6 |
neck of organ | 1.19e-08 | 6 |
thoracic segment organ | 2.45e-08 | 35 |
mucosa | 4.84e-08 | 20 |
respiratory primordium | 1.93e-07 | 38 |
endoderm of foregut | 1.93e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.43e-41 | 106 |
cell type cancer | 2.23e-34 | 143 |
cancer | 1.53e-22 | 235 |
disease of cellular proliferation | 9.87e-22 | 239 |
squamous cell carcinoma | 1.78e-19 | 14 |
respiratory system cancer | 2.53e-16 | 16 |
lung cancer | 2.56e-14 | 15 |
gastrointestinal system cancer | 1.51e-11 | 14 |
cervical cancer | 1.89e-10 | 5 |
adenocarcinoma | 2.69e-10 | 25 |
lung carcinoma | 1.15e-09 | 9 |
organ system cancer | 2.86e-08 | 137 |
non-small cell lung carcinoma | 3.92e-08 | 5 |
lung large cell carcinoma | 6.13e-08 | 3 |