FFCP PHASE1:Hg19::chrX:123227341..123227345,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10735 | |EntrezGene=10735 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11355 | |HGNC=11355 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-417bp_to_ENST00000475602_5end | |association_with_transcript=-417bp_to_ENST00000475602_5end | ||
|cluster_id=chrX:123227341..123227345,+ | |||
|description=CAGE_peak_11_at_STAG2_5end | |description=CAGE_peak_11_at_STAG2_5end | ||
|id=chrX:123227341..123227345,+ | |id=chrX:123227341..123227345,+ | ||
|ontology_enrichment_celltype=CL:0000037!4.11e-17!172;CL:0000566!4.11e-17!172;CL:0000738!1.14e-16!140;CL:0002032!1.40e-16!165;CL:0000837!1.40e-16!165;CL:0002087!2.25e-16!119;CL:0002031!1.28e-15!124;CL:0000988!1.41e-15!182;CL:0000860!5.34e-14!45;CL:0002057!1.44e-13!42;CL:0000763!2.13e-11!112;CL:0000049!2.13e-11!112;CL:0000839!3.83e-11!70;CL:0000766!6.86e-11!76;CL:0002194!1.07e-10!63;CL:0000576!1.07e-10!63;CL:0000040!1.07e-10!63;CL:0000559!1.07e-10!63;CL:0002009!1.55e-10!65;CL:0000557!5.09e-10!71 | |ontology_enrichment_celltype=CL:0000037!4.11e-17!172;CL:0000566!4.11e-17!172;CL:0000738!1.14e-16!140;CL:0002032!1.40e-16!165;CL:0000837!1.40e-16!165;CL:0002087!2.25e-16!119;CL:0002031!1.28e-15!124;CL:0000988!1.41e-15!182;CL:0000860!5.34e-14!45;CL:0002057!1.44e-13!42;CL:0000763!2.13e-11!112;CL:0000049!2.13e-11!112;CL:0000839!3.83e-11!70;CL:0000766!6.86e-11!76;CL:0002194!1.07e-10!63;CL:0000576!1.07e-10!63;CL:0000040!1.07e-10!63;CL:0000559!1.07e-10!63;CL:0002009!1.55e-10!65;CL:0000557!5.09e-10!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.36e-12;33!CL:0002057;4.36e-12;33!CL:0000473;1.44e-09;39!CL:0000234;1.44e-09;39!CL:0000576;3.31e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,3.02e-13,115;CL:0000738,4.81e-13,136;CL:0000860,9.38e-13,42;CL:0002057,9.38e-13,42;CL:0002031,1.76e-12,120;CL:0000473,7.56e-11,48;CL:0000234,7.56e-11,48;CL:0000037,1.51e-10,168;CL:0000839,8.29e-10,66;CL:0000988,9.94e-10,177;CL:0002194,1.09e-09,59;CL:0000576,1.09e-09,59;CL:0000040,1.09e-09,59;CL:0000559,1.09e-09,59;CL:0002009,2.74e-09,61;CL:0002032,4.27e-09,161;CL:0000837,4.27e-09,161;CL:0000766,6.94e-09,72;CL:0000557,3.11e-08,67 | |||
|ontology_enrichment_development_v019=CL:0002057;2.00e-10;42 | |||
|ontology_enrichment_disease=DOID:162!1.50e-08!235;DOID:14566!5.06e-08!239 | |ontology_enrichment_disease=DOID:162!1.50e-08!235;DOID:14566!5.06e-08!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.26e-11!102;UBERON:0003061!5.26e-11!102;UBERON:0002193!1.15e-08!112;UBERON:0002371!1.38e-08!80;UBERON:0001474!3.98e-08!86 | |ontology_enrichment_uberon=UBERON:0002390!5.26e-11!102;UBERON:0003061!5.26e-11!102;UBERON:0002193!1.15e-08!112;UBERON:0002371!1.38e-08!80;UBERON:0001474!3.98e-08!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.05e-10;4!UBERON:0000923;2.05e-10;4!UBERON:0010316;2.05e-10;4!UBERON:0005291;2.05e-10;4!UBERON:0002050;2.02e-08;5!UBERON:0005423;2.02e-08;5!UBERON:0006947;4.92e-07;3!UBERON:0004054;4.92e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.56e-08,76;UBERON:0002390,8.25e-08,98;UBERON:0003061,8.25e-08,98;UBERON:0001474,2.24e-07,82;UBERON:0006947,4.88e-07,3;UBERON:0004054,4.88e-07,3;UBERON:0002193,8.67e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0.229240217243854,0.0821005894499457,0.157421562627358,0,0.767658796194425,0.154816123316076,0,0,0,0.309868802321207,0.568676929949686,0,0.553995408531877,1.00272223735071,0.651032612147555,1.11957737119962,0.971680998056939,0.257575567634187,0.290796477559129,0.377875943688809,1.4555043671269,0.697287110717054,1.23350366406548,0.309706370895104,1.43846196161075,0.512321413058201,0.47296445977717,1.37898272294647,1.93645405075148,0,1.12945403725563,0.272906150057846,0.224723484445085,0.306083892370903,0.641858054152187,0.639337125799041,0,0.199463657621632,0.852449501065388,1.16083695451434,0,1.24564449799115,0.502497330513487,2.08593167368081,0.434377689410233,0.605399502633369,1.47311054395026,1.58231193720442,0.211255286311942,0.212604299965044,0.628975936525128,0.22465726229299,0.150176892841506,0.48217676009124,0.285012743741249,0.19891667719909,0.730656615058536,0,0.546138611262131,0,2.56038133539904,0.400395987036012,0,0,0.954053754535364,0,1.17447437874188,0.382273228125229,1.32171328579026,0.560508562981536,0.790152254325231,0.786839080455332,1.57204305099666,1.23360899399706,0.167186495390678,0,0,1.94826728407911,0.111410456885174,0.589211814949674,0,0,0.128091319725675,0.520237390239513,0.328875809207352,0,0.869409257205157,0.593146252648242,0.802622484269139,1.04535523804977,0.113309342697566,0.766440987203842,0.68725489096526,0.506039384039006,0,1.95325036156926,0,0,0.255973222308837,0,0.236777252044017,0,1.00803371612366,0.802320587350522,0.579297615531196,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0.953962497221368,0,0,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0.357198913136319,0.44905874525234,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.323745888736263,0,0.408308342509787,0.368502951935304,0.206651562351531,0,0,0,0,0.336672227908132,0,0,0,0,0,0,0,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0.337552664482532,0,0,0,0.161646056818812,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,1.45990943630332,0,0,0,0.464367928031979,0,0,0,0.241011029883482,0,0,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,2.20731549707325,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0.179117045405697,0,0,0,0.176096868026452,0.207328115540772,0.288239906833923,0.25248486685276,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0.336255431980582,0.591092280605782,0.431255149719035,0.898401253958239,0,0,0.773288812777695,0,0.637938751653163,0.749007023947182,2.99161459204025,0.414415513436035,0,0,0.271265023699736,0,0,0,0.234282829985426,0,0,0,0,0.184369168541703,0,0,0,0.413536052245775,1.07857100409308,0.640365346820666,0.303127571446259,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0.177561725313127,0.0821271560138091,0.519254429183621,0,0,0,0.0920809889358963,0,0,0.131124414959424,0.451199612907412,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.219259876645935,1.0457418040996,0,0,0,0.309123034943167,0,0.247528499761764,0,0,0,0,0.154048617114644,0.307007349452259,0.413509717453592,0.107420244868274,0.290033387828457,0.0852266274161009,0,0.165284915360978,0.192190067365106,0.765676274967505,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0.282431402330337,0,0,0,0,0,2.29391162142713,0,0.714695326373367,0.411362273086194,0,0.540031437238115,0,0,0,0.245040215981032,0.185803175125719,0.144269212976445,0.355709216742071,0,0,0,0.423347165447766,0,0.561594356226918,0.228234679033192,0.156679895773023,0,0.50787533340481,0.321176150207399,0.403599414382095,0.425846237690326,0.687010689511529,0,0,0,0.19538809540204,0,0,0.270455678475983,0.33307196799782,0,0,0.146508179271894,0,0.111443384277478,0.568272293612826,0,0,0.307160702099232,0,0.140669416410513,0.556543525114529,0,3.1668811219199,0.796991953004279,1.10513566212459,0.251932747854276,0.715880777515084,0.615424027305347,0,0.629078458031288,0.179021174675609,0.511572370226872,0.197286811273867,0,1.11136990144637,0,0.0927680981618513,0,0.260427761085233,0.174919999992391,0,0.1137934482855,0.254253650292766,0,0.689486746482929,0.874813840149763,0.173624994933292,0,0.120596438625408,0,0.552896299656123,0,0,0.21787692703798,0.41827123283581,0.615602068030377,0.341826167541004,0,0.179515288819544,0.108647371922008,0,0.183195186803725,0,2.04386596391473,0.156980256395025,0.166211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| ||
|short_description=p11@STAG2 | |short_description=p11@STAG2 | ||
}} | }} |
Latest revision as of 07:59, 19 September 2015
Short description: | p11@STAG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_STAG2_5end |
Coexpression cluster: | NA |
Association with transcript: | -417bp_to_ENST00000475602_5end |
EntrezGene: | STAG2 |
HGNC: | 11355 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 3.02e-13 | 115 |
leukocyte | 4.81e-13 | 136 |
classical monocyte | 9.38e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.38e-13 | 42 |
hematopoietic lineage restricted progenitor cell | 1.76e-12 | 120 |
defensive cell | 7.56e-11 | 48 |
phagocyte | 7.56e-11 | 48 |
hematopoietic stem cell | 1.51e-10 | 168 |
myeloid lineage restricted progenitor cell | 8.29e-10 | 66 |
hematopoietic cell | 9.94e-10 | 177 |
monopoietic cell | 1.09e-09 | 59 |
monocyte | 1.09e-09 | 59 |
monoblast | 1.09e-09 | 59 |
promonocyte | 1.09e-09 | 59 |
macrophage dendritic cell progenitor | 2.74e-09 | 61 |
hematopoietic oligopotent progenitor cell | 4.27e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.27e-09 | 161 |
myeloid leukocyte | 6.94e-09 | 72 |
granulocyte monocyte progenitor cell | 3.11e-08 | 67 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.56e-08 | 76 |
hematopoietic system | 8.25e-08 | 98 |
blood island | 8.25e-08 | 98 |
bone element | 2.24e-07 | 82 |
male genital duct | 4.88e-07 | 3 |
internal male genitalia | 4.88e-07 | 3 |
hemolymphoid system | 8.67e-07 | 108 |