FFCP PHASE1:Hg19::chr22:23648925..23648941,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=613 | |EntrezGene=613 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1014 | |HGNC=1014 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000475025_5end | |association_with_transcript=0bp_to_ENST00000475025_5end | ||
|cluster_id=chr22:23648925..23648941,+ | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_5_at_BCR_5end | |description=CAGE_peak_5_at_BCR_5end | ||
|id=chr22:23648925..23648941,+ | |id=chr22:23648925..23648941,+ | ||
|ontology_enrichment_celltype=CL:0002139!7.78e-24!24;CL:0000115!3.57e-22!35;CL:0002078!5.99e-16!44;CL:0000071!2.91e-15!18;CL:0002546!2.91e-15!18;CL:0000213!4.76e-15!57;CL:0000215!4.76e-15!57;CL:0000222!4.18e-12!119;CL:1000413!2.02e-11!9;CL:0005020!1.02e-10!6;CL:0002138!1.02e-10!6;CL:0005022!1.02e-10!6;CL:0002544!4.74e-07!6 | |ontology_enrichment_celltype=CL:0002139!7.78e-24!24;CL:0000115!3.57e-22!35;CL:0002078!5.99e-16!44;CL:0000071!2.91e-15!18;CL:0002546!2.91e-15!18;CL:0000213!4.76e-15!57;CL:0000215!4.76e-15!57;CL:0000222!4.18e-12!119;CL:1000413!2.02e-11!9;CL:0005020!1.02e-10!6;CL:0002138!1.02e-10!6;CL:0005022!1.02e-10!6;CL:0002544!4.74e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000115;1.32e-51;36!CL:0002139;6.56e-46;24!CL:1000413;8.56e-32;9!CL:0002078;1.11e-30;45!CL:0002138;2.71e-25;6!CL:0000071;3.26e-25;18!CL:0002188;1.44e-19;5!CL:0000213;3.28e-18;58!CL:0000215;3.28e-18;58!CL:0002544;2.39e-16;6!CL:1000746;4.99e-14;7!CL:1000612;4.99e-14;7!CL:0002545;3.25e-13;2!CL:0002681;3.15e-08;12!CL:0002584;3.15e-08;12!CL:0002557;4.46e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,5.38e-56,36;CL:0002139,5.86e-46,24;CL:0002078,5.36e-44,45;CL:0000213,3.11e-33,58;CL:0000215,3.11e-33,58;CL:1000413,6.99e-32,9;CL:0005020,1.91e-25,6;CL:0002138,1.91e-25,6;CL:0005022,1.91e-25,6;CL:0000071,3.62e-25,18;CL:0002546,3.62e-25,18;CL:0002188,1.48e-19,5;CL:0000222,2.71e-17,121;CL:0002544,1.97e-16,6;CL:1000746,5.09e-14,7;CL:1000612,5.09e-14,7;CL:0002545,3.06e-13,2;CL:0002681,3.19e-08,12;CL:0002584,3.19e-08,12;CL:0002557,7.40e-07,1 | |||
|ontology_enrichment_development_v019=CL:0005022;2.71e-25;6!CL:0002546;3.26e-25;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.93e-24!115;UBERON:0001009!2.03e-24!113;UBERON:0000055!4.75e-24!69;UBERON:0004872!3.41e-23!84;UBERON:0004535!1.04e-21!110;UBERON:0002049!1.54e-21!79;UBERON:0007798!1.54e-21!79;UBERON:0001981!5.91e-19!60;UBERON:0007500!5.91e-19!60;UBERON:0004537!5.91e-19!60;UBERON:0006965!5.91e-19!60;UBERON:0004111!8.81e-18!241;UBERON:0000477!3.04e-17!286;UBERON:0003914!3.06e-17!118;UBERON:0000025!4.06e-17!194;UBERON:0001986!2.91e-15!18;UBERON:0004638!2.91e-15!18;UBERON:0004852!2.91e-15!18;UBERON:0001637!2.46e-13!42;UBERON:0003509!2.46e-13!42;UBERON:0004572!2.46e-13!42;UBERON:0000487!1.06e-11!22;UBERON:0003915!2.02e-11!9;UBERON:0004700!2.02e-11!9;UBERON:0001917!2.02e-11!9;UBERON:0007100!1.70e-10!27;UBERON:0002465!4.99e-10!10;UBERON:0006914!8.41e-10!25;UBERON:0004573!3.93e-09!33;UBERON:0004571!3.93e-09!33;UBERON:0000483!5.43e-09!309;UBERON:0000119!1.00e-08!312;UBERON:0003103!6.74e-08!69;UBERON:0001473!9.96e-08!8;UBERON:0004536!9.96e-08!8;UBERON:0006558!9.96e-08!8;UBERON:0000948!1.44e-07!24;UBERON:0005498!1.44e-07!24;UBERON:0004140!1.44e-07!24;UBERON:0009881!1.44e-07!24;UBERON:0004141!1.44e-07!24;UBERON:0003084!1.44e-07!24;UBERON:0007005!1.44e-07!24;UBERON:0004139!1.44e-07!24;UBERON:0004291!1.44e-07!24;UBERON:0000467!6.45e-07!625;UBERON:0000480!7.38e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0003915;8.56e-32;9!UBERON:0004700;8.56e-32;9!UBERON:0001917;8.56e-32;9!UBERON:0004638;3.26e-25;18!UBERON:0001986;3.26e-25;18!UBERON:0004852;3.26e-25;18!UBERON:0002465;3.01e-21;10!UBERON:0000487;2.30e-20;22!UBERON:0001473;6.22e-19;8!UBERON:0004536;6.22e-19;8!UBERON:0006558;6.22e-19;8!UBERON:0006914;9.59e-18;25!UBERON:0000074;4.99e-14;7!UBERON:0001229;4.99e-14;7!UBERON:0002405;3.11e-13;27!UBERON:0005800;3.25e-13;2!UBERON:0001515;3.25e-13;2!UBERON:0000490;2.05e-12;33!UBERON:0000055;2.33e-12;65!UBERON:0001637;2.94e-12;42!UBERON:0003509;2.94e-12;42!UBERON:0004572;2.94e-12;42!UBERON:0000353;6.80e-10;15!UBERON:0002106;2.83e-09;3!UBERON:0002049;4.17e-09;75!UBERON:0007798;4.17e-09;75!UBERON:0007500;1.75e-08;56!UBERON:0001981;1.75e-08;56!UBERON:0004537;1.75e-08;56!UBERON:0003914;2.92e-08;74!UBERON:0001225;3.15e-08;12!UBERON:0008987;3.15e-08;12!UBERON:0002134;1.16e-07;1!UBERON:0005208;1.16e-07;1!UBERON:0004145;1.16e-07;1!UBERON:0005946;1.16e-07;1!UBERON:0005965;1.16e-07;1!UBERON:0002078;1.16e-07;1!UBERON:0000029;4.46e-07;1!UBERON:0002193;5.25e-07;42!UBERON:0000947;6.31e-07;21!UBERON:0010191;6.31e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,6.99e-32,9;UBERON:0004700,6.99e-32,9;UBERON:0001917,6.99e-32,9;UBERON:0000055,1.71e-27,68;UBERON:0004638,3.62e-25,18;UBERON:0001986,3.62e-25,18;UBERON:0004852,3.62e-25,18;UBERON:0002049,1.88e-23,78;UBERON:0007798,1.88e-23,78;UBERON:0002465,1.74e-21,10;UBERON:0000487,2.51e-20,22;UBERON:0001473,4.81e-19,8;UBERON:0004536,4.81e-19,8;UBERON:0006558,4.81e-19,8;UBERON:0001009,5.77e-19,112;UBERON:0003887,8.86e-18,12;UBERON:0006914,1.03e-17,25;UBERON:0004535,1.37e-17,109;UBERON:0004872,4.89e-17,83;UBERON:0007500,1.16e-16,59;UBERON:0001981,1.16e-16,59;UBERON:0004537,1.16e-16,59;UBERON:0006965,1.16e-16,59;UBERON:0003914,3.12e-14,117;UBERON:0010532,5.09e-14,7;UBERON:0000074,5.09e-14,7;UBERON:0001229,5.09e-14,7;UBERON:0001230,5.09e-14,7;UBERON:0003220,5.09e-14,7;UBERON:0005749,5.09e-14,7;UBERON:0004199,5.09e-14,7;UBERON:0004209,5.09e-14,7;UBERON:0004198,5.09e-14,7;UBERON:0005800,3.06e-13,2;UBERON:0001515,3.06e-13,2;UBERON:0005103,2.76e-12,8;UBERON:0000083,2.76e-12,8;UBERON:0009201,2.76e-12,8;UBERON:0006553,2.76e-12,8;UBERON:0003074,2.76e-12,8;UBERON:0003060,2.76e-12,8;UBERON:0001637,2.98e-12,42;UBERON:0003509,2.98e-12,42;UBERON:0004572,2.98e-12,42;UBERON:0000080,6.21e-11,9;UBERON:0002120,6.21e-11,9;UBERON:0004875,6.21e-11,9;UBERON:0005721,6.21e-11,9;UBERON:0005754,6.21e-11,9;UBERON:0007297,6.21e-11,9;UBERON:0000353,6.94e-10,15;UBERON:0004111,2.60e-09,240;UBERON:0002106,2.96e-09,3;UBERON:0004854,2.96e-09,3;UBERON:0009034,2.96e-09,3;UBERON:0002095,2.96e-09,3;UBERON:0004782,2.96e-09,3;UBERON:0003281,2.96e-09,3;UBERON:0009664,2.96e-09,3;UBERON:0002296,2.96e-09,3;UBERON:0005602,2.96e-09,3;UBERON:0001179,2.96e-09,3;UBERON:0006293,2.96e-09,3;UBERON:0004876,5.80e-09,11;UBERON:0004145,7.72e-09,3;UBERON:0003081,1.90e-08,203;UBERON:0001225,3.19e-08,12;UBERON:0008987,3.19e-08,12;UBERON:0000058,9.48e-08,19;UBERON:0002134,1.20e-07,1;UBERON:0005208,1.20e-07,1;UBERON:0005946,1.20e-07,1;UBERON:0005965,1.20e-07,1;UBERON:0002078,1.20e-07,1;UBERON:0000029,2.67e-07,1;UBERON:0000025,4.32e-07,192;UBERON:0003103,5.38e-07,68;UBERON:0000947,6.11e-07,21;UBERON:0010191,6.11e-07,21 | |||
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|short_description=p5@BCR | |short_description=p5@BCR | ||
}} | }} |
Latest revision as of 08:51, 19 September 2015
Short description: | p5@BCR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BCR_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 0bp_to_ENST00000475025_5end |
EntrezGene: | BCR |
HGNC: | 1014 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 5.38e-56 | 36 |
endothelial cell of vascular tree | 5.86e-46 | 24 |
meso-epithelial cell | 5.36e-44 | 45 |
lining cell | 3.11e-33 | 58 |
barrier cell | 3.11e-33 | 58 |
endothelial cell of artery | 6.99e-32 | 9 |
lymphangioblast | 1.91e-25 | 6 |
endothelial cell of lymphatic vessel | 1.91e-25 | 6 |
vascular lymphangioblast | 1.91e-25 | 6 |
blood vessel endothelial cell | 3.62e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.62e-25 | 18 |
glomerular endothelial cell | 1.48e-19 | 5 |
mesodermal cell | 2.71e-17 | 121 |
aortic endothelial cell | 1.97e-16 | 6 |
glomerular cell | 5.09e-14 | 7 |
kidney corpuscule cell | 5.09e-14 | 7 |
thoracic aorta endothelial cell | 3.06e-13 | 2 |
kidney cortical cell | 3.19e-08 | 12 |
renal cortical epithelial cell | 3.19e-08 | 12 |
fibroblast of pulmonary artery | 7.40e-07 | 1 |