FFCP PHASE1:Hg19::chrX:12924732..12924745,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51311 | |EntrezGene=51311 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15632 | |HGNC=15632 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NR97 | |UniProt=Q9NR97 | ||
|association_with_transcript=0bp_to_ENST00000218032,NM_138636_5end | |association_with_transcript=0bp_to_ENST00000218032,NM_138636_5end | ||
|cluster_id=chrX:12924732..12924745,+ | |||
|coexpression_cluster_id=C344 | |coexpression_cluster_id=C344 | ||
|description=CAGE_peak_1_at_TLR8_5end | |description=CAGE_peak_1_at_TLR8_5end | ||
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|ontology_enrichment_celltype=CL:0000766!5.18e-49!76;CL:0002194!6.77e-44!63;CL:0000576!6.77e-44!63;CL:0000040!6.77e-44!63;CL:0000559!6.77e-44!63;CL:0002009!2.51e-43!65;CL:0000557!2.62e-41!71;CL:0002057!1.04e-40!42;CL:0000738!1.63e-40!140;CL:0000839!1.95e-40!70;CL:0000763!4.55e-37!112;CL:0000049!4.55e-37!112;CL:0000860!1.10e-36!45;CL:0000037!9.29e-35!172;CL:0000566!9.29e-35!172;CL:0002087!3.75e-33!119;CL:0000988!1.43e-31!182;CL:0002032!1.43e-31!165;CL:0000837!1.43e-31!165;CL:0002031!2.69e-30!124;CL:0002393!1.12e-09!9;CL:0002397!1.12e-09!9;CL:0000094!4.27e-09!8;CL:0000081!4.14e-07!11 | |ontology_enrichment_celltype=CL:0000766!5.18e-49!76;CL:0002194!6.77e-44!63;CL:0000576!6.77e-44!63;CL:0000040!6.77e-44!63;CL:0000559!6.77e-44!63;CL:0002009!2.51e-43!65;CL:0000557!2.62e-41!71;CL:0002057!1.04e-40!42;CL:0000738!1.63e-40!140;CL:0000839!1.95e-40!70;CL:0000763!4.55e-37!112;CL:0000049!4.55e-37!112;CL:0000860!1.10e-36!45;CL:0000037!9.29e-35!172;CL:0000566!9.29e-35!172;CL:0002087!3.75e-33!119;CL:0000988!1.43e-31!182;CL:0002032!1.43e-31!165;CL:0000837!1.43e-31!165;CL:0002031!2.69e-30!124;CL:0002393!1.12e-09!9;CL:0002397!1.12e-09!9;CL:0000094!4.27e-09!8;CL:0000081!4.14e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.73e-36;33!CL:0002057;5.73e-36;33!CL:0000473;1.77e-35;39!CL:0000234;1.77e-35;39!CL:0000576;9.07e-32;48!CL:0000766;9.44e-25;69!CL:0000763;2.05e-11;100!CL:0000094;7.17e-11;8!CL:0002087;7.19e-11;104!CL:0000738;1.75e-10;136!CL:0000081;9.41e-09;11!CL:0002393;4.19e-08;6!CL:0002397;4.19e-08;6!CL:0000235;8.16e-08;6 | |ontology_enrichment_celltype_v019=CL:0000860;5.73e-36;33!CL:0002057;5.73e-36;33!CL:0000473;1.77e-35;39!CL:0000234;1.77e-35;39!CL:0000576;9.07e-32;48!CL:0000766;9.44e-25;69!CL:0000763;2.05e-11;100!CL:0000094;7.17e-11;8!CL:0002087;7.19e-11;104!CL:0000738;1.75e-10;136!CL:0000081;9.41e-09;11!CL:0002393;4.19e-08;6!CL:0002397;4.19e-08;6!CL:0000235;8.16e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.04e-61,72;CL:0002194,4.37e-57,59;CL:0000576,4.37e-57,59;CL:0000040,4.37e-57,59;CL:0000559,4.37e-57,59;CL:0000473,1.33e-56,48;CL:0000234,1.33e-56,48;CL:0002009,2.19e-56,61;CL:0000557,3.17e-51,67;CL:0000860,5.43e-50,42;CL:0002057,5.43e-50,42;CL:0000839,8.36e-49,66;CL:0000738,2.23e-43,136;CL:0002087,9.25e-39,115;CL:0000763,2.10e-36,108;CL:0000049,2.10e-36,108;CL:0002031,4.00e-33,120;CL:0000037,1.19e-32,168;CL:0000988,2.47e-30,177;CL:0002032,5.29e-29,161;CL:0000837,5.29e-29,161;CL:0002393,1.38e-11,9;CL:0002397,1.38e-11,9;CL:0000094,7.20e-11,8;CL:0000081,1.11e-08,11;CL:0000235,8.18e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;8.74e-36;42!CL:0000049;2.30e-11;108 | |ontology_enrichment_development_v019=CL:0002057;8.74e-36;42!CL:0000049;2.30e-11;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@TLR8 | |short_description=p1@TLR8 | ||
}} | }} |
Latest revision as of 09:38, 19 September 2015
Short description: | p1@TLR8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TLR8_5end |
Coexpression cluster: | C344_Neutrophils_CD14_Eosinophils_Whole_blood_CD14CD16_gall |
Association with transcript: | 0bp_to_ENST00000218032, NM_138636_5end |
EntrezGene: | TLR8 |
HGNC: | 15632 |
UniProt: | Q9NR97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.04e-61 | 72 |
monopoietic cell | 4.37e-57 | 59 |
monocyte | 4.37e-57 | 59 |
monoblast | 4.37e-57 | 59 |
promonocyte | 4.37e-57 | 59 |
defensive cell | 1.33e-56 | 48 |
phagocyte | 1.33e-56 | 48 |
macrophage dendritic cell progenitor | 2.19e-56 | 61 |
granulocyte monocyte progenitor cell | 3.17e-51 | 67 |
classical monocyte | 5.43e-50 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.43e-50 | 42 |
myeloid lineage restricted progenitor cell | 8.36e-49 | 66 |
leukocyte | 2.23e-43 | 136 |
nongranular leukocyte | 9.25e-39 | 115 |
myeloid cell | 2.10e-36 | 108 |
common myeloid progenitor | 2.10e-36 | 108 |
hematopoietic lineage restricted progenitor cell | 4.00e-33 | 120 |
hematopoietic stem cell | 1.19e-32 | 168 |
hematopoietic cell | 2.47e-30 | 177 |
hematopoietic oligopotent progenitor cell | 5.29e-29 | 161 |
hematopoietic multipotent progenitor cell | 5.29e-29 | 161 |
intermediate monocyte | 1.38e-11 | 9 |
CD14-positive, CD16-positive monocyte | 1.38e-11 | 9 |
granulocyte | 7.20e-11 | 8 |
blood cell | 1.11e-08 | 11 |
macrophage | 8.18e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.26e-56 | 98 |
blood island | 4.26e-56 | 98 |
hemolymphoid system | 1.15e-51 | 108 |
bone marrow | 4.58e-44 | 76 |
immune system | 4.63e-41 | 93 |
bone element | 2.87e-39 | 82 |
skeletal element | 6.81e-34 | 90 |
adult organism | 1.23e-31 | 114 |
skeletal system | 2.00e-28 | 100 |
lateral plate mesoderm | 4.97e-20 | 203 |
musculoskeletal system | 9.83e-12 | 167 |
blood | 4.69e-11 | 15 |
haemolymphatic fluid | 4.69e-11 | 15 |
organism substance | 4.69e-11 | 15 |
mesoderm | 7.46e-09 | 315 |
mesoderm-derived structure | 7.46e-09 | 315 |
presumptive mesoderm | 7.46e-09 | 315 |
germ layer | 2.11e-07 | 560 |
germ layer / neural crest | 2.11e-07 | 560 |
embryonic tissue | 2.11e-07 | 560 |
presumptive structure | 2.11e-07 | 560 |
germ layer / neural crest derived structure | 2.11e-07 | 560 |
epiblast (generic) | 2.11e-07 | 560 |
embryonic structure | 4.13e-07 | 564 |
tissue | 4.69e-07 | 773 |