FFCP PHASE1:Hg19::chr18:3447536..3447542,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:3447536..3447542,+ to FFCP PHASE1:Hg19::chr18:3447536..3447542,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7050 | |EntrezGene=7050 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11776 | |HGNC=11776 | ||
|TSSclassifier=strong | |||
|UniProt=F8VZB6 | |UniProt=F8VZB6 | ||
|association_with_transcript=-64bp_to_ENST00000548489_5end | |||
|cluster_id=chr18:3447536..3447542,+ | |||
|description=CAGE_peak_23_at_TGIF1_5end | |||
|id=chr18:3447536..3447542,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.87e-14!254;CL:0002076!3.87e-12!43;CL:0000012!2.14e-10!682;CL:0000548!9.24e-10!679;CL:0000004!9.24e-10!679;CL:0000255!9.24e-10!679;CL:0002321!1.64e-08!248;CL:0000220!3.02e-08!246;CL:0000223!7.60e-08!59;CL:0002368!1.74e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002328;3.02e-14;3!CL:0002202;7.38e-13;9!CL:0002632;7.38e-13;9!CL:0002368;1.72e-12;13!CL:0002159;2.47e-11;14!CL:0000317;2.78e-10;2!CL:1000448;2.78e-10;2!CL:0002308;2.78e-10;2!CL:0002140;2.78e-10;2!CL:0000575;3.92e-10;2!CL:0000362;1.96e-08;9!CL:0000240;1.43e-07;6!CL:0000311;1.43e-07;6!CL:0000079;1.43e-07;6!CL:0000237;1.43e-07;6!CL:0000307;1.65e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,1.98e-14,3;CL:0002202,5.73e-13,9;CL:0002632,5.73e-13,9;CL:0002368,1.38e-12,13;CL:0002159,2.14e-11,14;CL:0000317,1.46e-10,2;CL:1000448,1.46e-10,2;CL:0002308,1.46e-10,2;CL:0002140,1.46e-10,2;CL:0000575,5.55e-10,2;CL:0000362,1.45e-08,9;CL:0000240,1.43e-07,6;CL:0000311,1.43e-07,6;CL:0000079,1.43e-07,6;CL:0000237,1.43e-07,6;CL:0000036,1.43e-07,6;CL:0000357,1.43e-07,6;CL:0000114,1.43e-07,6;CL:0000068,1.60e-07,3;CL:0000069,1.60e-07,3;CL:0000307,1.60e-07,3;CL:0000377,1.60e-07,3;CL:0002077,2.15e-07,34;CL:0002076,2.15e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000357;1.43e-07;6!CL:0000114;1.43e-07;6!CL:0000377;1.65e-07;3 | |||
|ontology_enrichment_disease=DOID:1749!2.54e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;3.02e-14;3!UBERON:0002031;3.02e-14;3!UBERON:0002419;2.78e-10;2!UBERON:0007771;2.78e-10;2!UBERON:0003297;2.78e-10;2!UBERON:0001821;2.78e-10;2!UBERON:0003487;2.78e-10;2!UBERON:0001820;2.78e-10;2!UBERON:0002185;9.84e-09;5!UBERON:0007196;1.37e-07;15!UBERON:0001558;1.37e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.98e-14,3;UBERON:0002031,1.98e-14,3;UBERON:0002419,1.46e-10,2;UBERON:0007771,1.46e-10,2;UBERON:0003297,1.46e-10,2;UBERON:0001821,1.46e-10,2;UBERON:0003487,1.46e-10,2;UBERON:0001820,1.46e-10,2;UBERON:0005089,1.46e-10,2;UBERON:0005088,1.46e-10,2;UBERON:0002185,7.67e-09,5;UBERON:0007196,1.19e-07,15;UBERON:0001558,1.19e-07,15 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0.393364276848904,0.383829398097213,0.154816123316076,1.83884244895785,1.204823675113,3.69754010166788,0,0,0.587200878669695,0,0,0,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0,0,0.512321413058201,0,0.344745680736619,1.29096936716765,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0.211255286311942,0,0.209658645508376,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0,0,0,0,0.443458794925128,0,0.0654895377488563,2.91436230634034,1.11235332835329,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,1.74437620857014,0,0,0.397227542439656,0.286836620748814,0,0,1.06748995729705,0,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0,0.23486899728753,0.161872944368132,0.421352420106746,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0.211931901159562,0.600182192168805,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0.57978255948989,0.272746120590835,0,0.121973706129595,0.132529768321485,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,1.0647612003586,0.842923450390509,0,0.882351781859152,0,0.949082476444386,0.134831308160164,0.196221465125346,1.15424147083917,0,0,0,0,0,0,0,0,0.245976877086227,0.514703430895577,1.31700342490351,5.62008766288098,0.402115889646523,2.03694579348765,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0.148631162288728,0.93733833986777,0.335964256397719,0.850650583454319,1.79117045405697,4.65014301622339,0,0,0,0.207328115540772,0.144119953416961,0,0.126995788584338,0,0,1.71072446022705,0.102827492703324,0,0.285826432630578,0,0,0.07333828582095,0.775630294546667,0,0,0,0,0,0,0,0,0,3.29296134712308,0.65147236858747,0,3.16780749173372,0,0,0.499864955910285,0,0,2.10833939483032,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0.215714200818617,0.213455115606889,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,1.07946785661859,0.177561725313127,0.492762936082855,0,0.464841513839837,0.604297247958111,0.40101294060657,0.276242966807689,0.114814448164607,0,0,0.451199612907412,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0.501689773854853,0.509752546090077,0,0,0,0.261435451024901,0.256450125116389,0,0.650756789328606,0.103041011647722,0,0,4.59412430396938,1.95018073810956,0,0.48335359146061,1.23238893691716,0.614014698904518,1.92971201478343,0.859361958946189,0.435050081742686,0.767039646744908,0.0890320356467374,0.991709492165869,0.960950336825531,3.31793052485919,0.4046311234222,0,0.31481234683064,0,0,0.532306030317022,0,0,0.286249773483982,0,0,0,0,0,0.318203247925937,0,0,0.274537029736055,0.353437207037059,0.606547444719948,0,1.26377536871694,0,0.487426979262569,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,1.00387946542836,0.392996164052485,0.35667105148125,0.354761064070598,0.211107635297664,0,0.75894634753143,0,0.384888450902048,4.69211592875051,6.53345909167936,0,0.86101074534246,1.68471475667626,0,0.459446800413919,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0.185803175125719,0.144269212976445,0,0,0.399158742865633,0,0.211673582723883,0,0.561594356226918,0,0.313359791546046,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,1.4098700508785,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.796554137998498,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0.227884111694002,0,0.448788222048861,0,0,0.0915975934018623,0,0,0,1.32969345520125,0,0,0,1.51802986179348,0.317873157960757,0,0,0.282706142867882,0,0,0,0,0,0,0,0.067401132980677,0,0,0,1.17398771359254,0,0,0,0,0.063186579628488,0.60129367765797,0,0,0,0,0,1.13843818411917,0,0,0.293977192243133,0.69647365264322,0,0,0.290268993867255,0.292357268344742,0.164230914106418,0,0,0,0,0.397429223405979,0,0.195551382734803,0.480952921509202,0,0.599428828746391,0.144090417154106,0.114536596165916,0,0.432164393964449,0.248505071130865,0.235694034616795,0.135904206073614,0,0.101998217636322,0,0,0,1.27746588066972,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0.137539436597234,0.415440338029185,0.2249738915515,0,0,0,0,0.0524545881349981,0.844802692155252,0.179287339332845,0.191915197319445,0,0,0.25426853765475,0,0,0,0,2.29859058098149,0,0,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0.249960815924213,0.151649117541648,0.285465333544967,0,0,0,0.447764408660622,0.233713309847224,1.10961172300523,0.189403005275089,0.251567901752575,0,0,0.151230923763239,0.932623203496683,1.03498604992744,0.477890301491107,0.449803112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| 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| ||
|short_description=p23@TGIF1 | |||
}} | }} |
Latest revision as of 09:56, 19 September 2015
Short description: | p23@TGIF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_TGIF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -64bp_to_ENST00000548489_5end |
EntrezGene: | TGIF1 |
HGNC: | 11776 |
UniProt: | F8VZB6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 1.98e-14 | 3 |
epithelial cell of tracheobronchial tree | 5.73e-13 | 9 |
epithelial cell of lower respiratory tract | 5.73e-13 | 9 |
respiratory epithelial cell | 1.38e-12 | 13 |
general ecto-epithelial cell | 2.14e-11 | 14 |
sebum secreting cell | 1.46e-10 | 2 |
epithelial cell of sweat gland | 1.46e-10 | 2 |
epithelial cell of skin gland | 1.46e-10 | 2 |
acinar cell of sebaceous gland | 1.46e-10 | 2 |
corneal epithelial cell | 5.55e-10 | 2 |
epidermal cell | 1.45e-08 | 9 |
stratified squamous epithelial cell | 1.43e-07 | 6 |
keratin accumulating cell | 1.43e-07 | 6 |
stratified epithelial cell | 1.43e-07 | 6 |
keratinizing barrier epithelial cell | 1.43e-07 | 6 |
epithelial fate stem cell | 1.43e-07 | 6 |
stratified epithelial stem cell | 1.43e-07 | 6 |
surface ectodermal cell | 1.43e-07 | 6 |
duct epithelial cell | 1.60e-07 | 3 |
branched duct epithelial cell | 1.60e-07 | 3 |
tracheal epithelial cell | 1.60e-07 | 3 |
tracheoblast | 1.60e-07 | 3 |
ecto-epithelial cell | 2.15e-07 | 34 |
endo-epithelial cell | 2.15e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.98e-14 | 3 |
epithelium of bronchus | 1.98e-14 | 3 |
skin gland | 1.46e-10 | 2 |
epidermis gland | 1.46e-10 | 2 |
gland of integumental system | 1.46e-10 | 2 |
sebaceous gland | 1.46e-10 | 2 |
skin sebaceous gland | 1.46e-10 | 2 |
sweat gland | 1.46e-10 | 2 |
sweat gland placode | 1.46e-10 | 2 |
sebaceous gland placode | 1.46e-10 | 2 |
bronchus | 7.67e-09 | 5 |
tracheobronchial tree | 1.19e-07 | 15 |
lower respiratory tract | 1.19e-07 | 15 |