FFCP PHASE1:Hg19::chr18:3449488..3449499,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:3449488..3449499,+
|short_description=p28@TGIF1
|description=CAGE_peak_28_at_TGIF1_5end
|association_with_transcript=-35bp_to_ENST00000551557_5end
|Entre...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7050 | |EntrezGene=7050 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11776 | |HGNC=11776 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-35bp_to_ENST00000551557_5end | |||
|cluster_id=chr18:3449488..3449499,+ | |||
|description=CAGE_peak_28_at_TGIF1_5end | |||
|id=chr18:3449488..3449499,+ | |||
|ontology_enrichment_celltype=CL:0002057!9.65e-22!42;CL:0000738!5.63e-21!140;CL:0000860!9.59e-21!45;CL:0002087!1.83e-18!119;CL:0000037!2.37e-18!172;CL:0000566!2.37e-18!172;CL:0002031!2.39e-18!124;CL:0002032!2.60e-17!165;CL:0000837!2.60e-17!165;CL:0000766!3.35e-17!76;CL:0000988!3.52e-17!182;CL:0000557!6.85e-16!71;CL:0000839!3.31e-15!70;CL:0002009!6.36e-15!65;CL:0002194!1.12e-14!63;CL:0000576!1.12e-14!63;CL:0000040!1.12e-14!63;CL:0000559!1.12e-14!63;CL:0000763!1.31e-13!112;CL:0000049!1.31e-13!112;CL:0000134!6.19e-12!358;CL:0002320!8.21e-12!365;CL:0000219!1.02e-09!390;CL:0002393!1.37e-08!9;CL:0002397!1.37e-08!9;CL:0000048!4.91e-08!430;CL:0000723!9.60e-08!436;CL:0000034!2.14e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000623;1.62e-21;3!CL:0000097;7.63e-13;5!CL:0000860;2.89e-11;33!CL:0002057;2.89e-11;33!CL:0000625;6.76e-10;11!CL:0000473;2.01e-09;39!CL:0000234;2.01e-09;39!CL:0000542;3.32e-09;53!CL:0000766;1.39e-08;69!CL:0000236;1.62e-08;13!CL:0002087;8.56e-08;104!CL:0000163;2.42e-07;9!CL:0000576;6.03e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.27e-26,136;CL:0002031,5.51e-25,120;CL:0002032,2.49e-23,161;CL:0000837,2.49e-23,161;CL:0000037,3.61e-22,168;CL:0000623,2.57e-21,3;CL:0000825,2.57e-21,3;CL:0000988,8.27e-21,177;CL:0002087,3.96e-19,115;CL:0000766,3.67e-15,72;CL:0000838,8.17e-14,52;CL:0000542,1.62e-13,53;CL:0000051,1.62e-13,53;CL:0000097,5.56e-13,5;CL:0002028,5.56e-13,5;CL:0000839,4.78e-12,66;CL:0000557,7.74e-12,67;CL:0000860,2.72e-11,42;CL:0002057,2.72e-11,42;CL:0000763,9.32e-11,108;CL:0000049,9.32e-11,108;CL:0000625,5.37e-10,11;CL:0000473,1.05e-09,48;CL:0000234,1.05e-09,48;CL:0000134,6.10e-09,354;CL:0002320,1.14e-08,361;CL:0000236,5.46e-08,14;CL:0000219,1.02e-07,386;CL:0002194,1.73e-07,59;CL:0000576,1.73e-07,59;CL:0000040,1.73e-07,59;CL:0000559,1.73e-07,59;CL:0000163,2.04e-07,9;CL:0002009,3.33e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000051;3.32e-09;53!CL:0002057;7.28e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.66e-16!102;UBERON:0003061!2.66e-16!102;UBERON:0002193!1.48e-14!112;UBERON:0002371!3.88e-14!80;UBERON:0001474!8.35e-13!86;UBERON:0004765!2.68e-12!101;UBERON:0001434!2.68e-12!101;UBERON:0002405!9.38e-12!115;UBERON:0002384!1.45e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.38e-10,76;UBERON:0001474,2.65e-09,82;UBERON:0002384,2.66e-08,371;UBERON:0004765,2.70e-08,90;UBERON:0002405,5.82e-08,93;UBERON:0002390,1.89e-07,98;UBERON:0003061,1.89e-07,98;UBERON:0001434,2.92e-07,100 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,1.26343974685366,0.522371256399677,0,0,0,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,1.53531759238885,0.464448369948228,0,0,0.369754010166788,0,0,0.293600439334847,0.553995408531877,0.401088894940283,0.868043482863407,0.447830948479849,0.32389366601898,0,0.436194716338694,0,0,0.697287110717054,1.6446715520873,1.23882548358041,0.28769239232215,0.768482119587302,0,1.03423704220986,1.29096936716765,1.35426486594342,0.564727018627814,0,0.224723484445085,0.306083892370903,0.641858054152187,0,0.659702600373432,0.598390972864896,0,0.290209238628584,0,1.24564449799115,1.00499466102697,0.521482918420201,1.3031330682307,0,0.368277635987565,0.949387162322653,0.211255286311942,0.637812899895131,1.04829322754188,0.22465726229299,0.300353785683013,0.32145117339416,0.285012743741249,0.19891667719909,0.730656615058536,0,1.09227722252426,0,0,0.800791974072025,0,1.32208974556972,0,2.84606484554724,1.76171156811282,0.382273228125229,0,0,0.526768169550154,0,0.786021525498329,0.205601498999509,0.167186495390678,0,0.473447805734733,0,0.111410456885174,0,1.32920336750173,0.270803863765016,0,0.130059347559878,0.493313713811028,0.829050053357545,0.289803085735052,0.296573126324121,0,0,0.113309342697566,0.383220493601921,1.03088233644789,0.253019692019503,0,1.30216690771284,0,0.150575119077773,0,0,1.18388626022008,0,1.41124720257313,1.33720097891754,0.724122019413995,0,0,0,0.361439152384566,0,0.434539556882471,0,0,0,0,0,0.130979075497713,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.404132016209064,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0.337552664482532,0.0974370051611986,0,0,0.161646056818812,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0.325808305310325,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,1.65862492432618,2.30591925467138,1.2624243342638,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0.410952645100767,0,0,1.18218456121156,2.58753089831421,3.20857590699371,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0,0.195801157462741,0,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0.511707249066704,0.482561763430822,0,0,0,0,0,0,0,0,0.0920809889358963,0,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0.633322905892992,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0.79312517629427,0.106824071127473,0,0.245040215981032,0,0.144269212976445,0,0,0,0.191505370132367,0,0,0.280797178113459,0.228234679033192,0,0,0,0.1605880751037,0,0.425846237690326,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0.111308705022906,0.16480387422676,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,1.02314474045374,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0.23056390438806,0.0897576444097721,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0.995261931078505,0,0,0.296521128680622,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0.246346371159628,0,0.176512253383001,0,0,0,0,0.195551382734803,0,0,0,0.576361668616424,0,0,0,0,0.235694034616795,0,0,0,0.577901179803038,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0.157566364614447,0.0824158583811665,0,0,0.0846733320657845,0,0,0,0.275078873194468,0,0.674921674654501,0,0.0607495566580247,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,1.32506888912221,0,0,0,0,0.213574825135389,0,0,0,0,0.121792598380896,0,0,0.2506898940227,0,0,0.157054096250234,0,0,0.1251909307065,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0.457680136793847,0.302461847526478,0.15543720058278,0,0.318593534327405,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0.545545977607678,0.322231671127465,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0.245772908753719,0,0,0.106691729694141,0,0,0.368211900503681,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0.0771741581079447,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0.0939839179798536,0.193373663920732,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.124149428591716,0,0.445530107947154,0.202117188958219,0,0,0.202056159043763,0.143444410785353,0,0,0.106727345877715,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,1.26343974685366,0.522371256399677,0,0,0,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,1.53531759238885,0.464448369948228,0,0,0.369754010166788,0,0,0.293600439334847,0.553995408531877,0.401088894940283,0.868043482863407,0.447830948479849,0.32389366601898,0,0.436194716338694,0,0,0.697287110717054,1.6446715520873,1.23882548358041,0.28769239232215,0.768482119587302,0,1.03423704220986,1.29096936716765,1.35426486594342,0.564727018627814,0,0.224723484445085,0.306083892370903,0.641858054152187,0,0.659702600373432,0.598390972864896,0,0.290209238628584,0,1.24564449799115,1.00499466102697,0.521482918420201,1.3031330682307,0,0.368277635987565,0.949387162322653,0.211255286311942,0.637812899895131,1.04829322754188,0.22465726229299,0.300353785683013,0.32145117339416,0.285012743741249,0.19891667719909,0.730656615058536,0,1.09227722252426,0,0,0.800791974072025,0,1.32208974556972,0,2.84606484554724,1.76171156811282,0.382273228125229,0,0,0.526768169550154,0,0.786021525498329,0.205601498999509,0.167186495390678,0,0.473447805734733,0,0.111410456885174,0,1.32920336750173,0.270803863765016,0,0.130059347559878,0.493313713811028,0.829050053357545,0.289803085735052,0.296573126324121,0,0,0.113309342697566,0.383220493601921,1.03088233644789,0.253019692019503,0,1.30216690771284,0,0.150575119077773,0,0,1.18388626022008,0,1.41124720257313,1.33720097891754,0.724122019413995,0,0,0,0.361439152384566,0,0.434539556882471,0,0,0,0,0,0.130979075497713,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.404132016209064,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0.337552664482532,0.0974370051611986,0,0,0.161646056818812,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0.325808305310325,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,1.65862492432618,2.30591925467138,1.2624243342638,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0.410952645100767,0,0,1.18218456121156,2.58753089831421,3.20857590699371,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0,0.195801157462741,0,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0.511707249066704,0.482561763430822,0,0,0,0,0,0,0,0,0.0920809889358963,0,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0.633322905892992,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0.79312517629427,0.106824071127473,0,0.245040215981032,0,0.144269212976445,0,0,0,0.191505370132367,0,0,0.280797178113459,0.228234679033192,0,0,0,0.1605880751037,0,0.425846237690326,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0.111308705022906,0.16480387422676,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,1.02314474045374,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0.23056390438806,0.0897576444097721,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0.995261931078505,0,0,0.296521128680622,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0.246346371159628,0,0.176512253383001,0,0,0,0,0.195551382734803,0,0,0,0.576361668616424,0,0,0,0,0.235694034616795,0,0,0,0.577901179803038,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0.157566364614447,0.0824158583811665,0,0,0.0846733320657845,0,0,0,0.275078873194468,0,0.674921674654501,0,0.0607495566580247,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,1.32506888912221,0,0,0,0,0.213574825135389,0,0,0,0,0.121792598380896,0,0,0.2506898940227,0,0,0.157054096250234,0,0,0.1251909307065,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0.457680136793847,0.302461847526478,0.15543720058278,0,0.318593534327405,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0.545545977607678,0.322231671127465,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0.245772908753719,0,0,0.106691729694141,0,0,0.368211900503681,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0.0771741581079447,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0.0939839179798536,0.193373663920732,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.124149428591716,0,0.445530107947154,0.202117188958219,0,0,0.202056159043763,0.143444410785353,0,0,0.106727345877715,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p28@TGIF1 | |||
}} | }} |
Latest revision as of 10:10, 19 September 2015
Short description: | p28@TGIF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_TGIF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -35bp_to_ENST00000551557_5end |
EntrezGene: | TGIF1 |
HGNC: | 11776 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.38e-10 | 76 |
bone element | 2.65e-09 | 82 |
connective tissue | 2.66e-08 | 371 |
skeletal element | 2.70e-08 | 90 |
immune system | 5.82e-08 | 93 |
hematopoietic system | 1.89e-07 | 98 |
blood island | 1.89e-07 | 98 |
skeletal system | 2.92e-07 | 100 |