FFCP PHASE1:Hg19::chr18:3449527..3449582,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:3449527..3449582,+
|short_description=p6@TGIF1
|description=CAGE_peak_6_at_TGIF1_5end
|association_with_transcript=0bp_to_ENST00000551557_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7050 | |EntrezGene=7050 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11776 | |HGNC=11776 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000551557_5end | |||
|cluster_id=chr18:3449527..3449582,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_TGIF1_5end | |||
|id=chr18:3449527..3449582,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.80e-31!76;CL:0000557!2.26e-30!71;CL:0000738!1.29e-29!140;CL:0002009!1.59e-28!65;CL:0000763!2.46e-28!112;CL:0000049!2.46e-28!112;CL:0000037!2.93e-28!172;CL:0000566!2.93e-28!172;CL:0002194!4.69e-28!63;CL:0000576!4.69e-28!63;CL:0000040!4.69e-28!63;CL:0000559!4.69e-28!63;CL:0000839!1.25e-27!70;CL:0002032!1.86e-27!165;CL:0000837!1.86e-27!165;CL:0002057!8.82e-27!42;CL:0000988!2.05e-26!182;CL:0000860!1.52e-25!45;CL:0000134!3.73e-25!358;CL:0002087!5.42e-25!119;CL:0002031!1.87e-24!124;CL:0002320!3.40e-24!365;CL:0000219!6.93e-22!390;CL:0000048!9.95e-22!430;CL:0000034!1.31e-21!444;CL:0000723!8.85e-21!436;CL:0000012!9.32e-12!682;CL:0000063!2.25e-11!578;CL:0000144!1.08e-10!625;CL:0000548!1.25e-10!679;CL:0000004!1.25e-10!679;CL:0000255!1.25e-10!679;CL:0000003!5.30e-10!722;CL:0002371!2.13e-09!591 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.93e-25;33!CL:0002057;7.93e-25;33!CL:0000473;1.61e-22;39!CL:0000234;1.61e-22;39!CL:0000576;3.42e-22;48!CL:0000766;2.62e-17;69!CL:0000763;5.02e-11;100!CL:0002087;9.20e-10;104!CL:0000738;2.37e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.31e-38,72;CL:0000738,3.58e-38,136;CL:0000557,8.12e-37,67;CL:0000037,9.63e-37,168;CL:0002032,1.98e-35,161;CL:0000837,1.98e-35,161;CL:0000988,4.73e-35,177;CL:0000763,5.87e-35,108;CL:0000049,5.87e-35,108;CL:0002009,9.12e-35,61;CL:0002194,3.14e-34,59;CL:0000576,3.14e-34,59;CL:0000040,3.14e-34,59;CL:0000559,3.14e-34,59;CL:0000839,1.78e-33,66;CL:0000473,3.49e-33,48;CL:0000234,3.49e-33,48;CL:0002087,6.78e-32,115;CL:0000134,9.23e-32,354;CL:0000860,9.45e-32,42;CL:0002057,9.45e-32,42;CL:0002031,4.16e-31,120;CL:0002320,6.10e-30,361;CL:0000219,1.60e-27,386;CL:0000048,7.03e-27,427;CL:0000034,7.34e-26,441;CL:0000723,1.14e-25,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.72e-23;42!CL:0000049;1.19e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.70e-28!102;UBERON:0003061!1.70e-28!102;UBERON:0002371!1.71e-27!80;UBERON:0002193!2.16e-25!112;UBERON:0001474!7.01e-25!86;UBERON:0002384!5.72e-24!375;UBERON:0004765!2.32e-20!101;UBERON:0001434!2.32e-20!101;UBERON:0002405!2.18e-18!115;UBERON:0002204!6.02e-14!167;UBERON:0003081!2.09e-10!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.81e-34,76;UBERON:0002390,1.38e-33,98;UBERON:0003061,1.38e-33,98;UBERON:0001474,2.99e-31,82;UBERON:0002193,1.18e-30,108;UBERON:0002384,6.96e-30,371;UBERON:0002405,3.86e-29,93;UBERON:0004765,5.22e-26,90;UBERON:0001434,7.94e-24,100;UBERON:0002204,5.14e-15,167;UBERON:0003081,2.97e-13,203;UBERON:0000926,2.69e-09,315;UBERON:0004120,2.69e-09,315;UBERON:0006603,2.69e-09,315 | |||
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| ||
|short_description=p6@TGIF1 | |||
}} | }} |
Latest revision as of 10:10, 19 September 2015
Short description: | p6@TGIF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TGIF1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000551557_5end |
EntrezGene: | TGIF1 |
HGNC: | 11776 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.31e-38 | 72 |
leukocyte | 3.58e-38 | 136 |
granulocyte monocyte progenitor cell | 8.12e-37 | 67 |
hematopoietic stem cell | 9.63e-37 | 168 |
hematopoietic oligopotent progenitor cell | 1.98e-35 | 161 |
hematopoietic multipotent progenitor cell | 1.98e-35 | 161 |
hematopoietic cell | 4.73e-35 | 177 |
myeloid cell | 5.87e-35 | 108 |
common myeloid progenitor | 5.87e-35 | 108 |
macrophage dendritic cell progenitor | 9.12e-35 | 61 |
monopoietic cell | 3.14e-34 | 59 |
monocyte | 3.14e-34 | 59 |
monoblast | 3.14e-34 | 59 |
promonocyte | 3.14e-34 | 59 |
myeloid lineage restricted progenitor cell | 1.78e-33 | 66 |
defensive cell | 3.49e-33 | 48 |
phagocyte | 3.49e-33 | 48 |
nongranular leukocyte | 6.78e-32 | 115 |
mesenchymal cell | 9.23e-32 | 354 |
classical monocyte | 9.45e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.45e-32 | 42 |
hematopoietic lineage restricted progenitor cell | 4.16e-31 | 120 |
connective tissue cell | 6.10e-30 | 361 |
motile cell | 1.60e-27 | 386 |
multi fate stem cell | 7.03e-27 | 427 |
stem cell | 7.34e-26 | 441 |
somatic stem cell | 1.14e-25 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.81e-34 | 76 |
hematopoietic system | 1.38e-33 | 98 |
blood island | 1.38e-33 | 98 |
bone element | 2.99e-31 | 82 |
hemolymphoid system | 1.18e-30 | 108 |
connective tissue | 6.96e-30 | 371 |
immune system | 3.86e-29 | 93 |
skeletal element | 5.22e-26 | 90 |
skeletal system | 7.94e-24 | 100 |
musculoskeletal system | 5.14e-15 | 167 |
lateral plate mesoderm | 2.97e-13 | 203 |
mesoderm | 2.69e-09 | 315 |
mesoderm-derived structure | 2.69e-09 | 315 |
presumptive mesoderm | 2.69e-09 | 315 |