FFCP PHASE1:Hg19::chr12:56753869..56753930,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6773 | |EntrezGene=6773 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11363 | |HGNC=11363 | ||
|TSSclassifier=strong | |||
|UniProt=B4DLC8,G3V319,G3V268,G3V2M6 | |UniProt=B4DLC8,G3V319,G3V268,G3V2M6 | ||
|association_with_transcript=0bp_to_ENST00000418572,ENST00000555646,ENST00000555665,ENST00000556140,ENST00000557235,uc001slc.2,uc001sld.2,uc010sqn.1_5end | |association_with_transcript=0bp_to_ENST00000418572,ENST00000555646,ENST00000555665,ENST00000556140,ENST00000557235,uc001slc.2,uc001sld.2,uc010sqn.1_5end | ||
|cluster_id=chr12:56753869..56753930,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_1_at_STAT2_5end | |description=CAGE_peak_1_at_STAT2_5end | ||
|id=chr12:56753869..56753930,- | |id=chr12:56753869..56753930,- | ||
|ontology_enrichment_celltype=CL:0000048!9.69e-17!430;CL:0002320!3.19e-16!365;CL:0002057!5.69e-16!42;CL:0000723!8.15e-16!436;CL:0000134!6.21e-15!358;CL:0000034!1.28e-14!444;CL:0000219!8.74e-14!390;CL:0002194!4.93e-13!63;CL:0000576!4.93e-13!63;CL:0000040!4.93e-13!63;CL:0000559!4.93e-13!63;CL:0000860!8.42e-13!45;CL:0000766!1.11e-12!76;CL:0002009!5.90e-12!65;CL:0002371!1.44e-10!591;CL:0000557!4.35e-10!71;CL:0000839!6.96e-10!70;CL:0000144!1.77e-08!625;CL:0000055!4.89e-08!180;CL:0000057!7.90e-07!75 | |ontology_enrichment_celltype=CL:0000048!9.69e-17!430;CL:0002320!3.19e-16!365;CL:0002057!5.69e-16!42;CL:0000723!8.15e-16!436;CL:0000134!6.21e-15!358;CL:0000034!1.28e-14!444;CL:0000219!8.74e-14!390;CL:0002194!4.93e-13!63;CL:0000576!4.93e-13!63;CL:0000040!4.93e-13!63;CL:0000559!4.93e-13!63;CL:0000860!8.42e-13!45;CL:0000766!1.11e-12!76;CL:0002009!5.90e-12!65;CL:0002371!1.44e-10!591;CL:0000557!4.35e-10!71;CL:0000839!6.96e-10!70;CL:0000144!1.77e-08!625;CL:0000055!4.89e-08!180;CL:0000057!7.90e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.16e-11;33!CL:0002057;1.16e-11;33!CL:0000473;3.98e-11;39!CL:0000234;3.98e-11;39!CL:0000576;2.96e-10;48!CL:0000766;4.17e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.69e-18,427;CL:0002320,1.06e-17,361;CL:0000723,1.62e-17,433;CL:0000473,1.70e-17,48;CL:0000234,1.70e-17,48;CL:0000134,2.35e-16,354;CL:0000034,3.00e-16,441;CL:0000860,5.69e-16,42;CL:0002057,5.69e-16,42;CL:0002194,1.53e-15,59;CL:0000576,1.53e-15,59;CL:0000040,1.53e-15,59;CL:0000559,1.53e-15,59;CL:0000219,4.15e-15,386;CL:0000766,7.64e-15,72;CL:0002009,2.89e-14,61;CL:0000557,5.10e-12,67;CL:0000839,8.35e-12,66;CL:0002087,1.80e-07,115;CL:0000738,2.42e-07,136;CL:0000057,6.75e-07,76 | |||
|ontology_enrichment_development_v019=CL:0002057;2.49e-11;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.49e-15!375;UBERON:0002204!4.49e-12!167;UBERON:0002390!2.76e-11!102;UBERON:0003061!2.76e-11!102;UBERON:0002193!1.56e-10!112;UBERON:0002371!2.08e-10!80;UBERON:0004765!4.92e-10!101;UBERON:0001434!4.92e-10!101;UBERON:0002405!1.35e-09!115;UBERON:0001474!5.47e-09!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.50e-17,371;UBERON:0002204,4.87e-14,167;UBERON:0002390,6.19e-13,98;UBERON:0003061,6.19e-13,98;UBERON:0002371,3.12e-12,76;UBERON:0002193,5.09e-12,108;UBERON:0001434,6.34e-12,100;UBERON:0002405,1.05e-11,93;UBERON:0004765,1.54e-11,90;UBERON:0001474,1.46e-10,82;UBERON:0000926,1.03e-07,315;UBERON:0004120,1.03e-07,315;UBERON:0006603,1.03e-07,315 | |||
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|short_description=p1@STAT2 | |short_description=p1@STAT2 | ||
}} | }} |
Latest revision as of 10:56, 19 September 2015
Short description: | p1@STAT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_STAT2_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_ENST00000418572, ENST00000555646, ENST00000555665, ENST00000556140, ENST00000557235, uc001slc.2, uc001sld.2, uc010sqn.1_5end |
EntrezGene: | STAT2 |
HGNC: | 11363 |
UniProt: | B4DLC8G3V319G3V268G3V2M6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.69e-18 | 427 |
connective tissue cell | 1.06e-17 | 361 |
somatic stem cell | 1.62e-17 | 433 |
defensive cell | 1.70e-17 | 48 |
phagocyte | 1.70e-17 | 48 |
mesenchymal cell | 2.35e-16 | 354 |
stem cell | 3.00e-16 | 441 |
classical monocyte | 5.69e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.69e-16 | 42 |
monopoietic cell | 1.53e-15 | 59 |
monocyte | 1.53e-15 | 59 |
monoblast | 1.53e-15 | 59 |
promonocyte | 1.53e-15 | 59 |
motile cell | 4.15e-15 | 386 |
myeloid leukocyte | 7.64e-15 | 72 |
macrophage dendritic cell progenitor | 2.89e-14 | 61 |
granulocyte monocyte progenitor cell | 5.10e-12 | 67 |
myeloid lineage restricted progenitor cell | 8.35e-12 | 66 |
nongranular leukocyte | 1.80e-07 | 115 |
leukocyte | 2.42e-07 | 136 |
fibroblast | 6.75e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.50e-17 | 371 |
musculoskeletal system | 4.87e-14 | 167 |
hematopoietic system | 6.19e-13 | 98 |
blood island | 6.19e-13 | 98 |
bone marrow | 3.12e-12 | 76 |
hemolymphoid system | 5.09e-12 | 108 |
skeletal system | 6.34e-12 | 100 |
immune system | 1.05e-11 | 93 |
skeletal element | 1.54e-11 | 90 |
bone element | 1.46e-10 | 82 |
mesoderm | 1.03e-07 | 315 |
mesoderm-derived structure | 1.03e-07 | 315 |
presumptive mesoderm | 1.03e-07 | 315 |