FFCP PHASE1:Hg19::chr2:201994208..201994215,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8837 | |EntrezGene=8837 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1876 | |HGNC=1876 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_ENST00000440180_5end | |association_with_transcript=-10bp_to_ENST00000440180_5end | ||
|cluster_id=chr2:201994208..201994215,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_35_at_CFLAR_5end | |description=CAGE_peak_35_at_CFLAR_5end | ||
|id=chr2:201994208..201994215,+ | |id=chr2:201994208..201994215,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.03e-25!42;CL:0000860!1.04e-22!45;CL:0002009!8.62e-17!65;CL:0000766!5.51e-16!76;CL:0000557!1.42e-15!71;CL:0002194!6.78e-15!63;CL:0000576!6.78e-15!63;CL:0000040!6.78e-15!63;CL:0000559!6.78e-15!63;CL:0000839!1.90e-13!70;CL:0000738!4.15e-11!140;CL:0000763!1.12e-10!112;CL:0000049!1.12e-10!112;CL:0002031!1.23e-08!124;CL:0002087!1.86e-08!119;CL:0000037!4.82e-07!172;CL:0000566!4.82e-07!172;CL:0002032!5.66e-07!165;CL:0000837!5.66e-07!165;CL:0002139!9.60e-07!24 | |ontology_enrichment_celltype=CL:0002057!4.03e-25!42;CL:0000860!1.04e-22!45;CL:0002009!8.62e-17!65;CL:0000766!5.51e-16!76;CL:0000557!1.42e-15!71;CL:0002194!6.78e-15!63;CL:0000576!6.78e-15!63;CL:0000040!6.78e-15!63;CL:0000559!6.78e-15!63;CL:0000839!1.90e-13!70;CL:0000738!4.15e-11!140;CL:0000763!1.12e-10!112;CL:0000049!1.12e-10!112;CL:0002031!1.23e-08!124;CL:0002087!1.86e-08!119;CL:0000037!4.82e-07!172;CL:0000566!4.82e-07!172;CL:0002032!5.66e-07!165;CL:0000837!5.66e-07!165;CL:0002139!9.60e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.59e-49;33!CL:0002057;2.59e-49;33!CL:0000473;1.12e-33;39!CL:0000234;1.12e-33;39!CL:0000576;7.25e-27;48!CL:0000766;2.34e-16;69!CL:0001014;2.36e-13;2!CL:0001016;2.36e-13;2!CL:0002087;1.32e-10;104!CL:0000763;3.70e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.46e-51,42;CL:0002057,1.46e-51,42;CL:0000473,1.40e-44,48;CL:0000234,1.40e-44,48;CL:0002009,2.61e-41,61;CL:0000557,2.99e-37,67;CL:0002194,8.39e-35,59;CL:0000576,8.39e-35,59;CL:0000040,8.39e-35,59;CL:0000559,8.39e-35,59;CL:0000766,4.23e-34,72;CL:0000839,1.02e-30,66;CL:0000763,5.06e-26,108;CL:0000049,5.06e-26,108;CL:0000738,1.48e-21,136;CL:0002031,8.12e-21,120;CL:0002087,9.91e-18,115;CL:0002032,2.01e-17,161;CL:0000837,2.01e-17,161;CL:0000037,1.74e-16,168;CL:0000988,2.18e-15,177;CL:0001014,2.43e-13,2;CL:0001016,2.43e-13,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.32e-37;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.70e-14!216;UBERON:0002193!1.88e-14!112;UBERON:0002405!1.20e-13!115;UBERON:0002371!1.64e-13!80;UBERON:0001474!8.43e-12!86;UBERON:0002390!1.09e-11!102;UBERON:0003061!1.09e-11!102;UBERON:0000055!3.64e-10!69;UBERON:0004765!9.66e-10!101;UBERON:0001434!9.66e-10!101;UBERON:0002204!2.72e-09!167;UBERON:0001637!9.30e-09!42;UBERON:0003509!9.30e-09!42;UBERON:0004572!9.30e-09!42;UBERON:0001981!4.56e-08!60;UBERON:0007500!4.56e-08!60;UBERON:0004537!4.56e-08!60;UBERON:0006965!4.56e-08!60;UBERON:0002049!8.40e-08!79;UBERON:0007798!8.40e-08!79;UBERON:0004872!3.19e-07!84 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.39e-32,76;UBERON:0001474,1.14e-29,82;UBERON:0004765,1.20e-26,90;UBERON:0002405,1.21e-25,93;UBERON:0002390,4.12e-24,98;UBERON:0003061,4.12e-24,98;UBERON:0001434,1.53e-23,100;UBERON:0002193,1.82e-21,108;UBERON:0003081,8.97e-17,203;UBERON:0002204,1.33e-16,167;UBERON:0000926,1.01e-09,315;UBERON:0004120,1.01e-09,315;UBERON:0006603,1.01e-09,315 | |||
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| ||
|short_description=p35@CFLAR | |short_description=p35@CFLAR | ||
}} | }} |
Latest revision as of 12:26, 19 September 2015
Short description: | p35@CFLAR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_35_at_CFLAR_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -10bp_to_ENST00000440180_5end |
EntrezGene: | CFLAR |
HGNC: | 1876 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.46e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.46e-51 | 42 |
defensive cell | 1.40e-44 | 48 |
phagocyte | 1.40e-44 | 48 |
macrophage dendritic cell progenitor | 2.61e-41 | 61 |
granulocyte monocyte progenitor cell | 2.99e-37 | 67 |
monopoietic cell | 8.39e-35 | 59 |
monocyte | 8.39e-35 | 59 |
monoblast | 8.39e-35 | 59 |
promonocyte | 8.39e-35 | 59 |
myeloid leukocyte | 4.23e-34 | 72 |
myeloid lineage restricted progenitor cell | 1.02e-30 | 66 |
myeloid cell | 5.06e-26 | 108 |
common myeloid progenitor | 5.06e-26 | 108 |
leukocyte | 1.48e-21 | 136 |
hematopoietic lineage restricted progenitor cell | 8.12e-21 | 120 |
nongranular leukocyte | 9.91e-18 | 115 |
hematopoietic oligopotent progenitor cell | 2.01e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.01e-17 | 161 |
hematopoietic stem cell | 1.74e-16 | 168 |
hematopoietic cell | 2.18e-15 | 177 |
CD1a-positive Langerhans cell | 2.43e-13 | 2 |
immature CD1a-positive Langerhans cell | 2.43e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.39e-32 | 76 |
bone element | 1.14e-29 | 82 |
skeletal element | 1.20e-26 | 90 |
immune system | 1.21e-25 | 93 |
hematopoietic system | 4.12e-24 | 98 |
blood island | 4.12e-24 | 98 |
skeletal system | 1.53e-23 | 100 |
hemolymphoid system | 1.82e-21 | 108 |
lateral plate mesoderm | 8.97e-17 | 203 |
musculoskeletal system | 1.33e-16 | 167 |
mesoderm | 1.01e-09 | 315 |
mesoderm-derived structure | 1.01e-09 | 315 |
presumptive mesoderm | 1.01e-09 | 315 |