FFCP PHASE1:Hg19::chr19:51472222..51472234,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5653 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6367 | |||
|TSSclassifier=strong | |||
|UniProt=Q92876 | |||
|association_with_transcript=-175bp_to_ENST00000376851,ENST00000391808,NM_001012964,NM_001012965,uc002pui.2,uc002puj.2,uc010ycn.1_5end | |||
|cluster_id=chr19:51472222..51472234,- | |||
|coexpression_cluster_id=C849 | |||
|description=CAGE_peak_9_at_KLK6_5end | |||
|id=chr19:51472222..51472234,- | |||
|ontology_enrichment_celltype=CL:0002322!6.89e-13!5;CL:1000507!1.49e-10!12;CL:1000494!1.49e-10!12;CL:0000066!1.85e-10!254;CL:0000239!2.36e-09!3;CL:1000615!2.36e-09!3;CL:0002306!2.36e-09!3;CL:0002178!5.62e-09!3;CL:1000497!1.39e-08!18;CL:0002518!1.39e-08!18;CL:1000449!1.28e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000239;1.26e-12;3!CL:1000615;1.26e-12;3!CL:0002306;1.26e-12;3!CL:0000313;7.88e-10;1!CL:0000083;8.26e-10;4!CL:1000507;1.75e-08;10!CL:1000494;1.75e-08;10!CL:0002681;3.80e-07;12!CL:0002584;3.80e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.12e-12,3;CL:1000615,1.12e-12,3;CL:0002306,1.12e-12,3;CL:0000083,8.26e-10,4;CL:0000313,1.17e-09,1;CL:0000066,2.41e-09,253;CL:1000507,1.64e-08,10;CL:1000494,1.64e-08,10;CL:0002681,3.60e-07,12;CL:0002584,3.60e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0005425;7.88e-10;1 | |||
|ontology_enrichment_disease=DOID:305!2.56e-17!106;DOID:0050687!1.90e-14!143;DOID:299!8.33e-14!25;DOID:1749!5.24e-08!14;DOID:4074!5.48e-07!2;DOID:4905!5.48e-07!2;DOID:3498!5.48e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:299;2.21e-21;25!DOID:4074;1.10e-18;2!DOID:4905;1.10e-18;2!DOID:3498;1.10e-18;2!DOID:3111;1.98e-10;1!DOID:3603;1.98e-10;1!DOID:2152;7.88e-10;1!DOID:1793;8.26e-10;4!DOID:170;8.15e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:299,2.79e-21,25;DOID:4074,1.10e-18,2;DOID:4905,1.10e-18,2;DOID:3498,1.10e-18,2;DOID:305,5.61e-16,106;DOID:0050687,3.57e-11,143;DOID:3111,1.98e-10,1;DOID:3603,1.98e-10,1;DOID:1793,8.26e-10,4;DOID:2152,1.17e-09,1;DOID:0050686,4.43e-07,137;DOID:170,8.15e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000489!3.67e-11!32;UBERON:0009773!1.49e-10!12;UBERON:0001231!1.49e-10!12;UBERON:0004810!1.49e-10!12;UBERON:0000058!1.96e-10!26;UBERON:0006853!2.36e-09!3;UBERON:0007685!2.36e-09!3;UBERON:0004134!2.36e-09!3;UBERON:0002294!4.08e-09!7;UBERON:0001173!4.08e-09!7;UBERON:0004912!4.08e-09!7;UBERON:0002240!1.84e-08!3;UBERON:0005177!3.31e-08!107;UBERON:0002113!4.88e-08!27;UBERON:0003918!4.88e-08!27;UBERON:0005095!4.88e-08!27;UBERON:0007687!4.88e-08!27;UBERON:0004211!1.28e-07!16;UBERON:0001285!1.28e-07!16;UBERON:0007684!1.28e-07!16;UBERON:0003220!1.28e-07!16;UBERON:0004208!1.28e-07!16;UBERON:0003886!3.91e-07!63;UBERON:0006555!4.19e-07!17;UBERON:0005103!4.19e-07!17;UBERON:0000083!4.19e-07!17;UBERON:0009201!4.19e-07!17;UBERON:0004819!4.19e-07!17;UBERON:0006553!4.19e-07!17;UBERON:0003074!4.19e-07!17;UBERON:0003060!4.19e-07!17;UBERON:0003887!4.92e-07!21;UBERON:0000464!5.42e-07!104;UBERON:0002553!5.51e-07!70;UBERON:0001017!6.12e-07!82;UBERON:0000466!6.71e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;1.26e-12;3!UBERON:0007685;1.26e-12;3!UBERON:0004134;1.26e-12;3!UBERON:0004913;1.80e-10;1!UBERON:0003703;1.80e-10;1!UBERON:0001174;1.80e-10;1!UBERON:0004914;1.80e-10;1!UBERON:0005795;7.88e-10;1!UBERON:0000941;7.88e-10;1!UBERON:0004911;7.88e-10;1!UBERON:0001785;7.88e-10;1!UBERON:0002464;7.88e-10;1!UBERON:0004904;7.88e-10;1!UBERON:0001021;7.88e-10;1!UBERON:0004211;1.75e-08;10!UBERON:0009773;1.75e-08;10!UBERON:0001231;1.75e-08;10!UBERON:0004810;1.75e-08;10!UBERON:0001225;3.80e-07;12!UBERON:0008987;3.80e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,1.12e-12,3;UBERON:0007685,1.12e-12,3;UBERON:0004134,1.12e-12,3;UBERON:0004913,1.80e-10,1;UBERON:0003703,1.80e-10,1;UBERON:0001174,1.80e-10,1;UBERON:0004914,1.80e-10,1;UBERON:0000941,7.55e-10,1;UBERON:0001785,7.55e-10,1;UBERON:0002464,7.55e-10,1;UBERON:0004904,7.55e-10,1;UBERON:0001021,7.55e-10,1;UBERON:0003902,7.55e-10,1;UBERON:0005425,7.55e-10,1;UBERON:0004911,1.17e-09,1;UBERON:0004810,1.64e-08,10;UBERON:0001225,3.60e-07,12;UBERON:0008987,3.60e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.132529768321485,0.232387885739037,0.414644220061482,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91691339582606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96319574198153,0.616122696835318,0.784349769176855,0,0.211103257785751,0,0,0,0,0,0,5.09752546090077,1.66215201785745,0.671624264166535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,1.93866549219044,0.185536196323703,0,0,0,0,0,2.54253650292766,5.90969204419841,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0.359030577639089,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,2.77495773870551,0.989471500037586,0,0,0,0,0,0,0,0.337005664903385,0,0.468528891450678,0,3.91329237864179,3.64170569301139,0,0,0,0,0,0,0,0,0,0,1.13843818411917,0.138674673013139,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,4.88878456837007,0.0801588202515337,0,0.999048047910651,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0.137539436597234,0,0,0,0.121499113316049,0,0.0788057072991982,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,18.3251905802335,0,0,0,0,0,0,2.55336503108073,0,0,0,0,0,0,0.122026264901963,0,0,0,0.683060432355218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857766365499703,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,9.50904555113822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0,1.42769420259154,0.0981477185010256,0,0,1.61735932610474,0,0,0,0,0,0,0,0,17.5948742598284,0,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,0,0.271878931907327,0.197318320688547,0,0.111231401892069,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,1.3746412112643,0,0,1.11855431797792,2.0611549059201,0.609589624911347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0.8453114551668,0,0,0.128915775947154,0,0.178553938605658,0,0.240724100067505,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0.459474497674225,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.215166616178029,0,0,0,0,0,0,0,1.22068853494722,0,0,0 | |||
|short_description=p9@KLK6 | |||
}} |
Latest revision as of 13:32, 19 September 2015
Short description: | p9@KLK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_KLK6_5end |
Coexpression cluster: | C849_papillotubular_lung_mucinous_oral_Renal_clear_gall |
Association with transcript: | -175bp_to_ENST00000376851, ENST00000391808, NM_001012964, NM_001012965, uc002pui.2, uc002puj.2, uc010ycn.1_5end |
EntrezGene: | KLK6 |
HGNC: | 6367 |
UniProt: | Q92876 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.12e-12 | 3 |
kidney cortex tubule cell | 1.12e-12 | 3 |
epithelial cell of proximal tubule | 1.12e-12 | 3 |
epithelial cell of pancreas | 8.26e-10 | 4 |
serous secreting cell | 1.17e-09 | 1 |
epithelial cell | 2.41e-09 | 253 |
kidney tubule cell | 1.64e-08 | 10 |
nephron tubule epithelial cell | 1.64e-08 | 10 |
kidney cortical cell | 3.60e-07 | 12 |
renal cortical epithelial cell | 3.60e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 1.12e-12 | 3 |
region of nephron tubule | 1.12e-12 | 3 |
proximal tubule | 1.12e-12 | 3 |
hepatopancreatic ampulla | 1.80e-10 | 1 |
extrahepatic bile duct | 1.80e-10 | 1 |
common bile duct | 1.80e-10 | 1 |
duodenal papilla | 1.80e-10 | 1 |
cranial nerve II | 7.55e-10 | 1 |
cranial nerve | 7.55e-10 | 1 |
nerve trunk | 7.55e-10 | 1 |
nerve connecting eye with brain | 7.55e-10 | 1 |
nerve | 7.55e-10 | 1 |
retinal neural layer | 7.55e-10 | 1 |
presumptive neural retina | 7.55e-10 | 1 |
epithelium of female gonad | 1.17e-09 | 1 |
nephron tubule epithelium | 1.64e-08 | 10 |
cortex of kidney | 3.60e-07 | 12 |
renal parenchyma | 3.60e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 2.79e-21 | 25 |
pancreas adenocarcinoma | 1.10e-18 | 2 |
pancreatic carcinoma | 1.10e-18 | 2 |
pancreatic ductal adenocarcinoma | 1.10e-18 | 2 |
carcinoma | 5.61e-16 | 106 |
cell type cancer | 3.57e-11 | 143 |
cystadenocarcinoma | 1.98e-10 | 1 |
mucinous cystadenocarcinoma | 1.98e-10 | 1 |
pancreatic cancer | 8.26e-10 | 4 |
ovary epithelial cancer | 1.17e-09 | 1 |
organ system cancer | 4.43e-07 | 137 |
endocrine gland cancer | 8.15e-07 | 6 |