FFCP PHASE1:Hg19::chr6:106535656..106535682,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:106535656..106535682,+ to FFCP PHASE1:Hg19::chr6:106535656..106535682,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=639 | |EntrezGene=639 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9346 | |HGNC=9346 | ||
|TSSclassifier=strong | |||
|UniProt=B2REA5 | |UniProt=B2REA5 | ||
|association_with_transcript=201bp_to_ENST00000424894_5end | |||
|cluster_id=chr6:106535656..106535682,+ | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_10_at_PRDM1_5end | |||
|id=chr6:106535656..106535682,+ | |||
|ontology_enrichment_celltype=CL:0002009!2.62e-51!65;CL:0002194!4.78e-51!63;CL:0000576!4.78e-51!63;CL:0000040!4.78e-51!63;CL:0000559!4.78e-51!63;CL:0000557!2.19e-45!71;CL:0000839!4.21e-44!70;CL:0002057!1.90e-40!42;CL:0000766!3.54e-39!76;CL:0000860!8.10e-37!45;CL:0000763!1.42e-30!112;CL:0000049!1.42e-30!112;CL:0002087!1.28e-25!119;CL:0002031!6.55e-24!124;CL:0000738!6.10e-23!140;CL:0002032!4.68e-19!165;CL:0000837!4.68e-19!165;CL:0000037!2.51e-18!172;CL:0000566!2.51e-18!172;CL:0000988!1.18e-17!182;CL:0000990!3.23e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.09e-101;33!CL:0002057;2.09e-101;33!CL:0000473;1.45e-92;39!CL:0000234;1.45e-92;39!CL:0000576;3.30e-59;48!CL:0000766;2.32e-35;69!CL:0000763;2.91e-18;100!CL:0002087;1.09e-14;104!CL:0000738;3.23e-14;136!CL:0000235;2.38e-11;6!CL:0000840;3.00e-11;5!CL:0000990;1.59e-07;8!CL:0000988;4.01e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.63e-113,61;CL:0002194,9.53e-112,59;CL:0000576,9.53e-112,59;CL:0000040,9.53e-112,59;CL:0000559,9.53e-112,59;CL:0000473,8.72e-103,48;CL:0000234,8.72e-103,48;CL:0000557,9.64e-103,67;CL:0000839,3.50e-99,66;CL:0000860,1.28e-92,42;CL:0002057,1.28e-92,42;CL:0000766,2.50e-90,72;CL:0000763,3.99e-64,108;CL:0000049,3.99e-64,108;CL:0002031,6.04e-54,120;CL:0002087,1.17e-53,115;CL:0000738,1.26e-46,136;CL:0002032,2.90e-40,161;CL:0000837,2.90e-40,161;CL:0000037,3.14e-38,168;CL:0000988,7.56e-36,177;CL:0000134,1.73e-13,354;CL:0002320,4.74e-13,361;CL:0000219,1.64e-11,386;CL:0000048,3.29e-11,427;CL:0000235,3.44e-11,6;CL:0000840,3.73e-11,5;CL:0001029,3.73e-11,5;CL:0000723,6.33e-11,433;CL:0000034,1.47e-10,441;CL:0000990,1.83e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.64e-68;42!CL:0000049;7.84e-20;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.57e-41!102;UBERON:0003061!5.57e-41!102;UBERON:0002371!7.09e-40!80;UBERON:0002193!8.16e-37!112;UBERON:0001474!8.79e-36!86;UBERON:0002405!3.40e-30!115;UBERON:0004765!6.75e-29!101;UBERON:0001434!6.75e-29!101;UBERON:0003081!1.24e-14!216;UBERON:0002204!1.16e-12!167;UBERON:0007023!2.69e-12!115;UBERON:0000062!1.26e-11!511;UBERON:0000467!9.28e-07!625 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.96e-90,76;UBERON:0001474,1.28e-82,82;UBERON:0004765,1.35e-74,90;UBERON:0002405,6.14e-72,93;UBERON:0002390,7.24e-68,98;UBERON:0003061,7.24e-68,98;UBERON:0001434,2.37e-66,100;UBERON:0002193,7.64e-61,108;UBERON:0002204,2.12e-38,167;UBERON:0003081,9.65e-32,203;UBERON:0000926,2.77e-17,315;UBERON:0004120,2.77e-17,315;UBERON:0006603,2.77e-17,315;UBERON:0002384,1.87e-12,371;UBERON:0000923,1.89e-07,560;UBERON:0010316,1.89e-07,560;UBERON:0005291,1.89e-07,560;UBERON:0006598,1.89e-07,560;UBERON:0010317,1.89e-07,560;UBERON:0002532,1.89e-07,560;UBERON:0002050,2.50e-07,564;UBERON:0005423,7.81e-07,581 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,1.66198622559563,0.802177789880567,0.434021741431704,0.671746422719773,1.29557466407592,2.06060454107349,2.76256653681173,2.64513160582167,1.21292030593908,4.18372266430232,6.57868620834921,4.33588919253145,8.05538698502021,3.84241059793651,4.7296445977717,3.7922024881028,1.93645405075148,5.41705946377367,4.1413314699373,2.45615535052061,2.69668181334102,1.83650335422542,3.85114832491312,1.91801137739712,6.26717470354761,6.18337338627059,3.40979800426155,1.45104619314292,2.8369261234557,1.86846674698672,8.29120595347253,4.17186334736161,6.08128765174327,1.21079900526674,2.57794345191295,2.53169909952708,0,0.637812899895131,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557052284425868,0,0,0.270803863765016,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,2.27183175558278,1.56716763569341,1.19662164466979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,3.04205544681009,1.33768046059855,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,2.43247561282381,1.00451418286425,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.647142602455851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0.649243880549111,0,0,0,2.50634477090067,0,0.321176150207399,0.201799707191048,0,0,1.22896305723383,0.894704431569664,0.667396566847634,0,0,0,0,0,0,0,0.439524537815682,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0.123084805461069,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0,0,0.219385397153973,0,0,0.153900517007594,0.341826167541004,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0.337005664903385,0,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0.223171457441873,0,0.360299883542404,0,0,0,0,0,0,0,0.272406812223151,0,0,0,2.4747128070665,0,0.242998226632099,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0.471612915298998,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.398594520940089,0.327130788511688,0,0,0,0.19998739585493,0.426766918776564,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.128458450192919,1.41696576325585,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0.0634158101939068,0,0.548257766857182,0,0,0,0,0,0,0,0.177404740325278,0.115233987555779,0,0.135939465953663,0.328863867814245,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0.154348316215889,0.655678681511872,0,0,0,0.196308467114945,0.594092800654172,0.4226557275834,0,0.281951753939561,0.193373663920732,0.299823467774787,0,0,0,0,0,0,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0.476128862927481,0,0.186224142887574,0,0,0,0,0,0.404112318087525,0.0717222053926763,0,0,0,0,0,0,0.366724332548599,0,0.665756774185513,0,0 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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,1.66198622559563,0.802177789880567,0.434021741431704,0.671746422719773,1.29557466407592,2.06060454107349,2.76256653681173,2.64513160582167,1.21292030593908,4.18372266430232,6.57868620834921,4.33588919253145,8.05538698502021,3.84241059793651,4.7296445977717,3.7922024881028,1.93645405075148,5.41705946377367,4.1413314699373,2.45615535052061,2.69668181334102,1.83650335422542,3.85114832491312,1.91801137739712,6.26717470354761,6.18337338627059,3.40979800426155,1.45104619314292,2.8369261234557,1.86846674698672,8.29120595347253,4.17186334736161,6.08128765174327,1.21079900526674,2.57794345191295,2.53169909952708,0,0.637812899895131,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557052284425868,0,0,0.270803863765016,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,2.27183175558278,1.56716763569341,1.19662164466979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,3.04205544681009,1.33768046059855,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,2.43247561282381,1.00451418286425,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.647142602455851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0.649243880549111,0,0,0,2.50634477090067,0,0.321176150207399,0.201799707191048,0,0,1.22896305723383,0.894704431569664,0.667396566847634,0,0,0,0,0,0,0,0.439524537815682,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0.123084805461069,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0,0,0.219385397153973,0,0,0.153900517007594,0.341826167541004,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0.337005664903385,0,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0.223171457441873,0,0.360299883542404,0,0,0,0,0,0,0,0.272406812223151,0,0,0,2.4747128070665,0,0.242998226632099,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0.471612915298998,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.398594520940089,0.327130788511688,0,0,0,0.19998739585493,0.426766918776564,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.128458450192919,1.41696576325585,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0.0634158101939068,0,0.548257766857182,0,0,0,0,0,0,0,0.177404740325278,0.115233987555779,0,0.135939465953663,0.328863867814245,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0.154348316215889,0.655678681511872,0,0,0,0.196308467114945,0.594092800654172,0.4226557275834,0,0.281951753939561,0.193373663920732,0.299823467774787,0,0,0,0,0,0,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0.476128862927481,0,0.186224142887574,0,0,0,0,0,0.404112318087525,0.0717222053926763,0,0,0,0,0,0,0.366724332548599,0,0.665756774185513,0,0 | ||
|short_description=p10@PRDM1 | |||
}} | }} |
Latest revision as of 14:58, 19 September 2015
Short description: | p10@PRDM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PRDM1_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | 201bp_to_ENST00000424894_5end |
EntrezGene: | PRDM1 |
HGNC: | 9346 |
UniProt: | B2REA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.96e-90 | 76 |
bone element | 1.28e-82 | 82 |
skeletal element | 1.35e-74 | 90 |
immune system | 6.14e-72 | 93 |
hematopoietic system | 7.24e-68 | 98 |
blood island | 7.24e-68 | 98 |
skeletal system | 2.37e-66 | 100 |
hemolymphoid system | 7.64e-61 | 108 |
musculoskeletal system | 2.12e-38 | 167 |
lateral plate mesoderm | 9.65e-32 | 203 |
mesoderm | 2.77e-17 | 315 |
mesoderm-derived structure | 2.77e-17 | 315 |
presumptive mesoderm | 2.77e-17 | 315 |
connective tissue | 1.87e-12 | 371 |
germ layer | 1.89e-07 | 560 |
germ layer / neural crest | 1.89e-07 | 560 |
embryonic tissue | 1.89e-07 | 560 |
presumptive structure | 1.89e-07 | 560 |
germ layer / neural crest derived structure | 1.89e-07 | 560 |
epiblast (generic) | 1.89e-07 | 560 |
embryonic structure | 2.50e-07 | 564 |
developing anatomical structure | 7.81e-07 | 581 |