FFCP PHASE1:Hg19::chr2:20424844..20424863,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6382 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10658 | |||
|TSSclassifier=strong | |||
|UniProt=E9PHH3,F8WCX9 | |||
|association_with_transcript=0bp_to_ENST00000403076,ENST00000447124_5end | |||
|cluster_id=chr2:20424844..20424863,- | |||
|coexpression_cluster_id=C572 | |||
|description=CAGE_peak_2_at_SDC1_5end | |||
|id=chr2:20424844..20424863,- | |||
|ontology_enrichment_celltype=CL:0000066!1.37e-34!254;CL:0002321!3.75e-20!248;CL:0000220!4.55e-20!246;CL:0000223!2.82e-17!59;CL:0002076!4.25e-16!43;CL:0002368!8.25e-09!13;CL:0000055!7.82e-08!180;CL:0000548!2.41e-07!679;CL:0000004!2.41e-07!679;CL:0000255!2.41e-07!679;CL:0000012!9.66e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0002076;4.28e-13;42!CL:0002368;4.25e-09;13!CL:0002251;1.24e-07;20!CL:0002202;8.99e-07;9!CL:0002632;8.99e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.02e-32,253;CL:0000223,7.22e-19,58;CL:0002321,4.75e-18,250;CL:0002076,1.03e-17,42;CL:0002368,4.46e-09,13;CL:0002251,1.19e-07,20;CL:0002202,9.39e-07,9;CL:0002632,9.39e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;2.10e-10;58 | |||
|ontology_enrichment_disease=DOID:305!2.17e-14!106;DOID:0050687!4.63e-12!143;DOID:7!8.31e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.90e-14,106;DOID:0050687,1.96e-11,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.28e-26!169;UBERON:0000925!6.28e-26!169;UBERON:0006595!6.28e-26!169;UBERON:0003104!3.43e-23!238;UBERON:0009142!3.43e-23!238;UBERON:0001007!8.22e-20!155;UBERON:0001555!8.22e-20!155;UBERON:0007026!8.22e-20!155;UBERON:0002100!1.12e-18!216;UBERON:0000077!3.83e-18!130;UBERON:0000475!5.08e-17!365;UBERON:0004921!1.42e-16!129;UBERON:0004185!1.42e-16!129;UBERON:0000466!3.53e-16!126;UBERON:0000481!6.57e-15!347;UBERON:0003102!2.91e-14!95;UBERON:0000464!1.04e-13!104;UBERON:0005177!2.34e-13!107;UBERON:0001004!8.41e-13!72;UBERON:0009569!2.16e-12!113;UBERON:0001041!2.29e-12!98;UBERON:0005256!4.30e-12!143;UBERON:0001048!4.50e-12!168;UBERON:0005911!6.19e-12!82;UBERON:0001008!1.18e-10!45;UBERON:0006554!1.98e-10!44;UBERON:0000065!7.83e-10!53;UBERON:0005153!1.36e-09!37;UBERON:0000468!2.11e-09!659;UBERON:0000161!4.14e-09!35;UBERON:0003100!9.14e-09!41;UBERON:0005156!1.44e-08!59;UBERON:0000990!1.44e-08!59;UBERON:0008947!1.59e-08!38;UBERON:0003258!1.59e-08!38;UBERON:0005178!2.02e-08!34;UBERON:0002224!2.02e-08!34;UBERON:0000480!2.68e-08!626;UBERON:0000467!4.10e-08!625;UBERON:0003064!5.73e-08!37;UBERON:0001444!6.12e-08!48;UBERON:0005157!8.43e-08!51;UBERON:0005172!9.14e-08!55;UBERON:0005173!9.14e-08!55;UBERON:0005181!1.01e-07!35;UBERON:0000062!1.17e-07!511;UBERON:0000072!2.15e-07!46;UBERON:0003134!5.48e-07!37;UBERON:0000474!5.48e-07!37;UBERON:0002553!6.06e-07!70;UBERON:0007196!7.62e-07!14;UBERON:0001558!7.62e-07!14;UBERON:0000915!7.91e-07!52;UBERON:0000064!9.51e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.32e-08;30!UBERON:0001008;1.32e-08;30!UBERON:0005178;4.40e-08;34!UBERON:0002224;4.40e-08;34!UBERON:0000065;7.02e-08;44!UBERON:0005181;1.91e-07;35!UBERON:0003100;5.90e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.16e-25,160;UBERON:0000925,1.16e-25,160;UBERON:0006595,1.16e-25,160;UBERON:0001007,1.57e-19,145;UBERON:0001555,1.57e-19,145;UBERON:0007026,1.57e-19,145;UBERON:0002100,3.50e-18,199;UBERON:0004921,3.58e-16,118;UBERON:0005177,1.24e-15,101;UBERON:0003102,5.82e-15,99;UBERON:0001008,5.87e-13,48;UBERON:0006554,1.01e-12,47;UBERON:0001004,1.69e-12,74;UBERON:0009569,2.71e-12,112;UBERON:0001041,2.71e-12,87;UBERON:0005911,1.90e-11,82;UBERON:0001048,8.33e-10,160;UBERON:0005153,9.78e-10,37;UBERON:0003104,1.69e-09,160;UBERON:0009142,1.69e-09,160;UBERON:0000161,2.07e-09,36;UBERON:0000065,2.66e-09,54;UBERON:0005178,5.04e-09,34;UBERON:0002224,5.04e-09,34;UBERON:0003100,6.93e-09,41;UBERON:0005256,1.08e-08,122;UBERON:0008947,1.22e-08,38;UBERON:0003258,1.22e-08,38;UBERON:0005157,1.28e-08,47;UBERON:0005156,1.71e-08,59;UBERON:0000990,1.71e-08,59;UBERON:0005181,2.35e-08,35;UBERON:0000033,5.10e-08,56;UBERON:0005172,1.01e-07,54;UBERON:0005173,1.01e-07,54;UBERON:0001444,3.54e-07,49;UBERON:0003134,4.69e-07,37;UBERON:0000474,4.69e-07,37;UBERON:0000915,5.01e-07,52;UBERON:0000072,7.18e-07,47 | |||
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| |||
|short_description=p2@SDC1 | |||
}} |
Latest revision as of 15:36, 19 September 2015
Short description: | p2@SDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SDC1_5end |
Coexpression cluster: | C572_Urothelial_Prostate_Keratinocyte_Corneal_Mammary_Bronchial_Gingival |
Association with transcript: | 0bp_to_ENST00000403076, ENST00000447124_5end |
EntrezGene: | SDC1 |
HGNC: | 10658 |
UniProt: | E9PHH3F8WCX9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.02e-32 | 253 |
endodermal cell | 7.22e-19 | 58 |
embryonic cell | 4.75e-18 | 250 |
endo-epithelial cell | 1.03e-17 | 42 |
respiratory epithelial cell | 4.46e-09 | 13 |
epithelial cell of alimentary canal | 1.19e-07 | 20 |
epithelial cell of tracheobronchial tree | 9.39e-07 | 9 |
epithelial cell of lower respiratory tract | 9.39e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.90e-14 | 106 |
cell type cancer | 1.96e-11 | 143 |