FFCP PHASE1:Hg19::chr14:29236169..29236216,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2290 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3811 | |||
|TSSclassifier=strong | |||
|UniProt=P55316 | |||
|association_with_transcript=-70bp_to_ENST00000313071,NM_005249,uc001wqe.2_5end | |||
|cluster_id=chr14:29236169..29236216,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_6_at_FOXG1_5end | |||
|id=chr14:29236169..29236216,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.33e-16!25;CL:0000243!3.55e-15!15;CL:0000125!3.55e-15!15;CL:0000030!3.55e-15!15;CL:0000339!3.55e-15!15;CL:0000095!4.22e-13!17;CL:0000123!4.22e-13!17;CL:0000133!3.92e-10!59;CL:0000128!2.58e-09!7;CL:0000126!2.58e-09!7;CL:0000127!2.58e-09!7;CL:0002453!2.58e-09!7;CL:0000221!6.32e-08!71 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.58e-19;25!CL:0000243;8.26e-14;15!CL:0000125;8.26e-14;15!CL:0000095;3.91e-12;17!CL:0000128;1.55e-09;7!CL:0000126;1.55e-09;7!CL:0000127;1.55e-09;7!CL:0002605;3.43e-09;3!CL:0000064;6.51e-08;3!CL:0000067;6.51e-08;3!CL:0005012;6.51e-08;3!CL:0002304;6.51e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.63e-19,25;CL:0000243,7.93e-14,15;CL:0000125,7.93e-14,15;CL:0000030,7.93e-14,15;CL:0000339,7.93e-14,15;CL:0000095,3.77e-12,17;CL:0000123,3.77e-12,17;CL:0000133,4.64e-11,59;CL:0000128,1.64e-09,7;CL:0000126,1.64e-09,7;CL:0000127,1.64e-09,7;CL:0002453,1.64e-09,7;CL:0000047,3.43e-09,8;CL:0002605,3.54e-09,3;CL:0000221,2.56e-08,72;CL:0000064,6.52e-08,3;CL:0000067,6.52e-08,3;CL:0005012,6.52e-08,3;CL:0002304,6.52e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000339;8.26e-14;15!UBERON:0006238;2.88e-11;10!UBERON:0006601;1.40e-08;82!CL:0000133;8.33e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.99e-47!82;UBERON:0005743!2.68e-44!86;UBERON:0000955!4.03e-44!69;UBERON:0006238!4.03e-44!69;UBERON:0001893!2.14e-43!34;UBERON:0002780!2.39e-43!41;UBERON:0001890!2.39e-43!41;UBERON:0006240!2.39e-43!41;UBERON:0002791!3.92e-42!33;UBERON:0003080!5.29e-42!42;UBERON:0001869!7.34e-42!32;UBERON:0000073!1.95e-41!94;UBERON:0001016!1.95e-41!94;UBERON:0003056!4.25e-39!61;UBERON:0002020!3.57e-38!34;UBERON:0003528!3.57e-38!34;UBERON:0000153!3.48e-35!129;UBERON:0007811!3.48e-35!129;UBERON:0003075!3.61e-35!86;UBERON:0007284!3.61e-35!86;UBERON:0000033!5.06e-34!123;UBERON:0002616!6.55e-34!59;UBERON:0000956!1.71e-33!25;UBERON:0000203!1.71e-33!25;UBERON:0002346!8.69e-33!90;UBERON:0001049!2.25e-32!57;UBERON:0005068!2.25e-32!57;UBERON:0006241!2.25e-32!57;UBERON:0007135!2.25e-32!57;UBERON:0004121!9.98e-30!169;UBERON:0002619!1.78e-29!22;UBERON:0000924!1.74e-28!173;UBERON:0006601!1.74e-28!173;UBERON:0001950!1.22e-26!20;UBERON:0007023!5.81e-12!115;UBERON:0002420!8.03e-12!9;UBERON:0007245!8.03e-12!9;UBERON:0010009!8.03e-12!9;UBERON:0010011!8.03e-12!9;UBERON:0000454!8.03e-12!9;UBERON:0000025!2.55e-10!194;UBERON:0001871!2.37e-09!7;UBERON:0000475!2.70e-09!365;UBERON:0000200!2.82e-09!6;UBERON:0009663!3.82e-09!7;UBERON:0002021!1.57e-08!5;UBERON:0000483!1.68e-08!309;UBERON:0000064!1.72e-08!219;UBERON:0000349!2.23e-08!5;UBERON:0000119!3.13e-08!312;UBERON:0001872!4.05e-08!5;UBERON:0000477!3.65e-07!286;UBERON:0007625!4.95e-07!11;UBERON:0002308!8.46e-07!9;UBERON:0000125!8.46e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.54e-67;32!UBERON:0002791;1.20e-63;32!UBERON:0000956;6.41e-63;25!UBERON:0000203;6.41e-63;25!UBERON:0001893;5.70e-62;34!UBERON:0003528;9.43e-58;34!UBERON:0002020;9.43e-58;34!UBERON:0002619;3.17e-55;22!UBERON:0001950;8.36e-50;20!UBERON:0002780;1.94e-46;41!UBERON:0001890;1.94e-46;41!UBERON:0000073;1.27e-28;53!UBERON:0002616;1.27e-28;53!UBERON:0000955;3.42e-25;68!UBERON:0001017;1.79e-24;75!UBERON:0001016;1.91e-20;83!UBERON:0000200;2.72e-16;6!UBERON:0002021;7.58e-15;5!UBERON:0000349;2.07e-14;5!UBERON:0001871;3.76e-14;6!UBERON:0001872;3.90e-14;5!UBERON:0002420;6.70e-14;9!UBERON:0007245;6.70e-14;9!UBERON:0010009;6.70e-14;9!UBERON:0010011;6.70e-14;9!UBERON:0000454;6.70e-14;9!UBERON:0000369;3.76e-11;4!UBERON:0002435;3.76e-11;4!UBERON:0000204;3.76e-11;4!UBERON:0009663;2.42e-09;7!UBERON:0001870;2.99e-09;3!UBERON:0005383;9.68e-09;3!UBERON:0005382;9.68e-09;3!UBERON:0001778;6.51e-08;3!UBERON:0001775;6.51e-08;3!UBERON:0007625;1.32e-07;11!UBERON:0011216;1.96e-07;132!UBERON:0000125;3.47e-07;9!UBERON:0002308;3.47e-07;9!UBERON:0001954;5.13e-07;2!UBERON:0003022;5.13e-07;2!UBERON:0002421;5.13e-07;2!UBERON:0002600;5.13e-07;2!UBERON:0002702;7.88e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.86e-74,32;UBERON:0001893,1.12e-69,34;UBERON:0002791,1.34e-69,32;UBERON:0003528,4.11e-65,34;UBERON:0002020,4.11e-65,34;UBERON:0002780,2.23e-64,41;UBERON:0001890,2.23e-64,41;UBERON:0003080,2.23e-64,41;UBERON:0006240,2.23e-64,41;UBERON:0001017,5.41e-63,81;UBERON:0000956,8.06e-63,25;UBERON:0000203,8.06e-63,25;UBERON:0001016,4.64e-58,89;UBERON:0003056,1.52e-57,61;UBERON:0000955,1.97e-56,68;UBERON:0006238,1.97e-56,68;UBERON:0002619,3.87e-55,22;UBERON:0000073,6.62e-51,53;UBERON:0002616,6.62e-51,53;UBERON:0001950,1.02e-49,20;UBERON:0001049,1.04e-47,56;UBERON:0005068,1.04e-47,56;UBERON:0006241,1.04e-47,56;UBERON:0007135,1.04e-47,56;UBERON:0003075,1.03e-44,82;UBERON:0007284,1.03e-44,82;UBERON:0002346,3.88e-42,86;UBERON:0004121,2.08e-34,171;UBERON:0000924,2.08e-34,171;UBERON:0006601,2.08e-34,171;UBERON:0010371,5.55e-33,104;UBERON:0010314,2.80e-25,132;UBERON:0011216,8.45e-25,223;UBERON:0000200,3.58e-16,6;UBERON:0000025,3.19e-15,192;UBERON:0002021,9.12e-15,5;UBERON:0000349,1.78e-14,5;UBERON:0001871,2.75e-14,6;UBERON:0001872,5.50e-14,5;UBERON:0002420,6.39e-14,9;UBERON:0007245,6.39e-14,9;UBERON:0010009,6.39e-14,9;UBERON:0010011,6.39e-14,9;UBERON:0000454,6.39e-14,9;UBERON:0007023,1.43e-13,114;UBERON:0000369,4.31e-11,4;UBERON:0002435,4.31e-11,4;UBERON:0000204,4.31e-11,4;UBERON:0010082,4.31e-11,4;UBERON:0000483,2.36e-10,306;UBERON:0000119,3.89e-10,309;UBERON:0004111,4.52e-10,240;UBERON:0009663,2.91e-09,7;UBERON:0001870,3.08e-09,3;UBERON:0000923,6.08e-09,560;UBERON:0010316,6.08e-09,560;UBERON:0005291,6.08e-09,560;UBERON:0006598,6.08e-09,560;UBERON:0010317,6.08e-09,560;UBERON:0002532,6.08e-09,560;UBERON:0002050,9.14e-09,564;UBERON:0005383,9.19e-09,3;UBERON:0005382,9.19e-09,3;UBERON:0005423,1.26e-08,581;UBERON:0000922,3.66e-08,592;UBERON:0001778,6.52e-08,3;UBERON:0001775,6.52e-08,3;UBERON:0007625,1.39e-07,11;UBERON:0000125,3.99e-07,9;UBERON:0002308,3.99e-07,9;UBERON:0001954,5.14e-07,2;UBERON:0003022,5.14e-07,2;UBERON:0002421,5.14e-07,2;UBERON:0002600,5.14e-07,2;UBERON:0001876,8.36e-07,2;UBERON:0002702,8.36e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,3.61616716814386,2.92124036154949,3.90346239032406,0.123121058076788,1.22400414746552,0.626909442956176,2.86235987131057,6.56997240349844,4.01736446703369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79616152611729,1.33037638477538,1.05401742831751,1.30979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0.125118519871964,0.277064115484183,0,0,0,0.567160915800105,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20725321410337,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0.740707561268237,0,0,1.44331342025273,3.36198174427723,0.939269553886573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03275699377971,13.0139853857622,20.1055091322201,9.88345965472658,12.7587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55776328755086,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0.316379424718726,0,0.511795582622668,0,0,0,0,0,0,0,0,0,0.975267478179181,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97659059106519,4.92342957436795,0,0,0,0,0,0,2.96579179256249,4.06179858021529,0,0,0,0,0,0,0,0.969332746095218,2.50473865036998,9.98068990005971,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,2.65722415744152,3.25610384288601,0,0,0,1.75508317723178,0,0,0,0,0,0.538545866458633,0.54323685961004,0,0,0,0,0,0,0.225595660617181,0.784250137270958,0.503464760927528,0.75901493089674,0,0,0,0,0.865554558968364,0,0,0,0,0,0,0.539209063845416,0,3.51396668588009,0,0,0,0,0,10.7125466570672,0.063186579628488,0.901940516486955,1.45163467956146,0,0,0,0,3.13070500632772,0.832048038078832,0,0,0,0,0,0,0,0,0.290967049465258,0,0.451961481561065,0,6.75629679790165,3.48209377757333,0,0,0,0,0,0.114536596165916,0,0,0,0,0.271808412147228,0.209205692624666,1.93796613509011,2.60055530911367,0.600420288709789,1.23214841002794,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,6.36183751847443,5.99294986890933,0,0,0,0,0,4.1917194094037,0,0,0,0.844802692155252,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,4.43034089983493,3.53876168215693,4.00610978260799,0,0,0,8.02422082630139,3.7494122388632,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.604923695052956,0.777186002913902,0.591420599958536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0.463044948647668,0.489473409012935,0,0,0,0,0,0,0,0,0.607719912354764,3.31820246764154,0.194860308839388,0.132864840313363,0,1.31043939538565,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,3.08300280463006,7.08482881627925,5.74681892605745,3.07674546361133,20.1657356977374,4.21859240031729,6.13607453401034,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0.261906694481422,0,0,3.03919130782776,3.12431239445539,4.13373593002368,3.10737469950143,21.8789923607288,0,0,0,0.127762427639595,0,0,0.606965604236632,0.682986574053893,0,0.115233987555779,0,0,2.63091094251396,0,0,0,3.61365856806804,0,0,0,0,0,0,0,0.869291361512897,0,0,0,0,0,0.946656005844523,1.02256085710989,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,4.94732325354431,1.66059127923341,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,3.62874593044325,3.46756599973665,23.12658658804,0,0,0,0,0.378499274505237,0,0.126698501011437,0.203977659483963,0,0.643264296743914,0.250707539292375,0.985123076837112,1.33982065078089,0,1.34462894620464,0,0.476128862927481,0.839655827868079,1.30356900021302,0,0,0,0,0,0,0.143444410785353,0.332660356546013,0,0.533636729388577,0,0,0,0,0,0,0.402547587182052,0.320568492303233 | |||
|short_description=p6@FOXG1 | |||
}} |
Latest revision as of 16:26, 19 September 2015
Short description: | p6@FOXG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FOXG1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -70bp_to_ENST00000313071, NM_005249, uc001wqe.2_5end |
EntrezGene: | FOXG1 |
HGNC: | 3811 |
UniProt: | P55316 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.63e-19 | 25 |
glial cell (sensu Vertebrata) | 7.93e-14 | 15 |
glial cell | 7.93e-14 | 15 |
glioblast | 7.93e-14 | 15 |
glioblast (sensu Vertebrata) | 7.93e-14 | 15 |
neuron associated cell | 3.77e-12 | 17 |
neuron associated cell (sensu Vertebrata) | 3.77e-12 | 17 |
neurectodermal cell | 4.64e-11 | 59 |
oligodendrocyte | 1.64e-09 | 7 |
macroglial cell | 1.64e-09 | 7 |
astrocyte | 1.64e-09 | 7 |
oligodendrocyte precursor cell | 1.64e-09 | 7 |
neuronal stem cell | 3.43e-09 | 8 |
astrocyte of the cerebral cortex | 3.54e-09 | 3 |
ectodermal cell | 2.56e-08 | 72 |
ciliated cell | 6.52e-08 | 3 |
ciliated epithelial cell | 6.52e-08 | 3 |
multi-ciliated epithelial cell | 6.52e-08 | 3 |
non-pigmented ciliary epithelial cell | 6.52e-08 | 3 |