FFCP PHASE1:Hg19::chr18:46065393..46065444,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:46065393..46065444,+ to FFCP PHASE1:Hg19::chr18:46065393..46065444,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9811 | |EntrezGene=9811 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23925 | |HGNC=23925 | ||
|TSSclassifier=strong | |||
|UniProt=O43310 | |UniProt=O43310 | ||
|association_with_transcript=0bp_to_ENST00000256413,ENST00000382998,NM_001142397,NM_014772,uc002ldc.2,uc002ldd.2_5end | |||
|cluster_id=chr18:46065393..46065444,+ | |||
|coexpression_cluster_id=C503 | |||
|description=CAGE_peak_1_at_CTIF_5end | |||
|id=chr18:46065393..46065444,+ | |||
|ontology_enrichment_celltype=CL:0002194!6.99e-07!63;CL:0000576!6.99e-07!63;CL:0000040!6.99e-07!63;CL:0000559!6.99e-07!63 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.99e-07,59;CL:0000576,1.99e-07,59;CL:0000040,1.99e-07,59;CL:0000559,1.99e-07,59;CL:0000557,4.26e-07,67;CL:0000473,4.62e-07,48;CL:0000234,4.62e-07,48;CL:0000839,5.62e-07,66 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.46e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.61e-50!115;UBERON:0001049!2.34e-29!57;UBERON:0005068!2.34e-29!57;UBERON:0006241!2.34e-29!57;UBERON:0007135!2.34e-29!57;UBERON:0001017!4.96e-28!82;UBERON:0000073!3.85e-27!94;UBERON:0001016!3.85e-27!94;UBERON:0005743!1.45e-26!86;UBERON:0000955!9.57e-25!69;UBERON:0006238!9.57e-25!69;UBERON:0002616!1.69e-24!59;UBERON:0003075!3.98e-24!86;UBERON:0007284!3.98e-24!86;UBERON:0002346!2.00e-23!90;UBERON:0003080!6.34e-23!42;UBERON:0002780!2.14e-22!41;UBERON:0001890!2.14e-22!41;UBERON:0006240!2.14e-22!41;UBERON:0004121!3.43e-19!169;UBERON:0000924!5.24e-19!173;UBERON:0006601!5.24e-19!173;UBERON:0002020!2.80e-18!34;UBERON:0003528!2.80e-18!34;UBERON:0001893!4.25e-18!34;UBERON:0002791!1.59e-17!33;UBERON:0001869!6.10e-17!32;UBERON:0003056!1.26e-15!61;UBERON:0000033!1.57e-15!123;UBERON:0000153!2.83e-15!129;UBERON:0007811!2.83e-15!129;UBERON:0002619!3.91e-15!22;UBERON:0000468!3.74e-14!659;UBERON:0001950!7.11e-14!20;UBERON:0000062!1.06e-13!511;UBERON:0000467!1.17e-13!625;UBERON:0000480!1.29e-13!626;UBERON:0000956!4.81e-13!25;UBERON:0000203!4.81e-13!25;UBERON:0002050!1.37e-10!605;UBERON:0005423!1.37e-10!605;UBERON:0000923!1.59e-10!604;UBERON:0005291!1.59e-10!604;UBERON:0006598!1.59e-10!604;UBERON:0002532!1.59e-10!604;UBERON:0000922!2.51e-10!612;UBERON:0003076!1.33e-07!15;UBERON:0003057!1.33e-07!15;UBERON:0002390!5.45e-07!102;UBERON:0003061!5.45e-07!102;UBERON:0002193!5.90e-07!112;UBERON:0002308!9.05e-07!9;UBERON:0000125!9.05e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.39e-16;41!UBERON:0001890;2.39e-16;41!UBERON:0000073;1.29e-15;53!UBERON:0002616;1.29e-15;53!UBERON:0003528;1.67e-15;34!UBERON:0002020;1.67e-15;34!UBERON:0001893;1.84e-15;34!UBERON:0001869;2.88e-15;32!UBERON:0002791;2.92e-15;32!UBERON:0002619;3.78e-15;22!UBERON:0001950;6.90e-14;20!UBERON:0000956;5.10e-13;25!UBERON:0000203;5.10e-13;25!UBERON:0007023;7.03e-13;114!UBERON:0001017;7.92e-12;75!UBERON:0000955;2.42e-11;68!UBERON:0001016;3.86e-11;83!UBERON:0000125;8.46e-07;9!UBERON:0002308;8.46e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.73e-49,114;UBERON:0001049,8.19e-29,56;UBERON:0005068,8.19e-29,56;UBERON:0006241,8.19e-29,56;UBERON:0007135,8.19e-29,56;UBERON:0001016,5.71e-28,89;UBERON:0001017,1.69e-27,81;UBERON:0000073,5.23e-27,53;UBERON:0002616,5.23e-27,53;UBERON:0000955,3.20e-24,68;UBERON:0006238,3.20e-24,68;UBERON:0002780,2.14e-22,41;UBERON:0001890,2.14e-22,41;UBERON:0003080,2.14e-22,41;UBERON:0006240,2.14e-22,41;UBERON:0003075,1.32e-21,82;UBERON:0007284,1.32e-21,82;UBERON:0002346,5.91e-21,86;UBERON:0003528,2.80e-18,34;UBERON:0002020,2.80e-18,34;UBERON:0001893,4.25e-18,34;UBERON:0004121,3.97e-17,171;UBERON:0000924,3.97e-17,171;UBERON:0006601,3.97e-17,171;UBERON:0002791,5.78e-17,32;UBERON:0001869,6.09e-17,32;UBERON:0010371,9.99e-16,104;UBERON:0003056,1.04e-15,61;UBERON:0002619,3.91e-15,22;UBERON:0001950,7.10e-14,20;UBERON:0011216,1.05e-13,223;UBERON:0010314,1.50e-13,132;UBERON:0000923,4.54e-13,560;UBERON:0010316,4.54e-13,560;UBERON:0005291,4.54e-13,560;UBERON:0006598,4.54e-13,560;UBERON:0010317,4.54e-13,560;UBERON:0002532,4.54e-13,560;UBERON:0000956,4.80e-13,25;UBERON:0000203,4.80e-13,25;UBERON:0002050,1.92e-12,564;UBERON:0005423,5.24e-11,581;UBERON:0000922,1.38e-10,592;UBERON:0003076,1.33e-07,15;UBERON:0003057,1.33e-07,15;UBERON:0002390,2.35e-07,98;UBERON:0003061,2.35e-07,98;UBERON:0002193,2.72e-07,108;UBERON:0000479,8.62e-07,773;UBERON:0000125,9.05e-07,9;UBERON:0002308,9.05e-07,9 | |||
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| ||
|short_description=p1@CTIF | |||
}} | }} |
Latest revision as of 16:29, 19 September 2015
Short description: | p1@CTIF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CTIF_5end |
Coexpression cluster: | C503_occipital_spinal_thalamus_locus_optic_globus_pineal |
Association with transcript: | 0bp_to_ENST00000256413, ENST00000382998, NM_001142397, NM_014772, uc002ldc.2, uc002ldd.2_5end |
EntrezGene: | CTIF |
HGNC: | 23925 |
UniProt: | O43310 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.99e-07 | 59 |
monocyte | 1.99e-07 | 59 |
monoblast | 1.99e-07 | 59 |
promonocyte | 1.99e-07 | 59 |
granulocyte monocyte progenitor cell | 4.26e-07 | 67 |
defensive cell | 4.62e-07 | 48 |
phagocyte | 4.62e-07 | 48 |
myeloid lineage restricted progenitor cell | 5.62e-07 | 66 |