FFCP PHASE1:Hg19::chr1:89873193..89873207,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:89873193..89873207,+
|short_description=p3@GBP1P1
|description=CAGE_peak_3_at_GBP1P1_5end
|association_with_transcript=-30bp_to_ENST00000513638,NR_003133,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=400759 | |EntrezGene=400759 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=39561 | |HGNC=39561 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-30bp_to_ENST00000513638,NR_003133,uc009wcy.1_5end | |||
|cluster_id=chr1:89873193..89873207,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_3_at_GBP1P1_5end | |||
|id=chr1:89873193..89873207,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.44e-21!42;CL:0000860!4.08e-19!45;CL:0002194!9.90e-12!63;CL:0000576!9.90e-12!63;CL:0000040!9.90e-12!63;CL:0000559!9.90e-12!63;CL:0002009!4.21e-11!65;CL:0000839!1.06e-09!70;CL:0000557!1.91e-09!71;CL:0000766!2.74e-08!76;CL:0002087!6.07e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.81e-50;33!CL:0002057;3.81e-50;33!CL:0000473;2.20e-32;39!CL:0000234;2.20e-32;39!CL:0000576;5.25e-28;48!CL:0000766;9.93e-13;69!CL:0002087;1.00e-07;104!CL:0000763;1.08e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.69e-49,42;CL:0002057,9.69e-49,42;CL:0000473,3.31e-42,48;CL:0000234,3.31e-42,48;CL:0002194,4.70e-33,59;CL:0000576,4.70e-33,59;CL:0000040,4.70e-33,59;CL:0000559,4.70e-33,59;CL:0002009,7.14e-32,61;CL:0000839,3.16e-29,66;CL:0000557,9.59e-29,67;CL:0000766,1.57e-26,72;CL:0000763,1.41e-16,108;CL:0000049,1.41e-16,108;CL:0002087,2.33e-15,115;CL:0002031,1.41e-14,120;CL:0000738,1.88e-12,136;CL:0002032,5.61e-10,161;CL:0000837,5.61e-10,161;CL:0000037,2.04e-09,168;CL:0000988,9.25e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;6.05e-33;42!UBERON:0010115;7.59e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.83e-15!115;UBERON:0002371!5.60e-09!80;UBERON:0002390!9.46e-09!102;UBERON:0003061!9.46e-09!102;UBERON:0001474!9.29e-08!86;UBERON:0004765!1.01e-07!101;UBERON:0001434!1.01e-07!101;UBERON:0002193!1.16e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;7.59e-08;1!UBERON:0002134;7.59e-08;1!UBERON:0005208;7.59e-08;1!UBERON:0004145;7.59e-08;1!UBERON:0005946;7.59e-08;1!UBERON:0005965;7.59e-08;1!UBERON:0002078;7.59e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.77e-25,76;UBERON:0001474,6.69e-23,82;UBERON:0004765,1.43e-20,90;UBERON:0002405,8.46e-20,93;UBERON:0002390,1.29e-18,98;UBERON:0003061,1.29e-18,98;UBERON:0001434,3.54e-18,100;UBERON:0002193,1.41e-16,108;UBERON:0002204,8.35e-11,167;UBERON:0003081,1.75e-10,203;UBERON:0002134,7.10e-08,1;UBERON:0005208,7.10e-08,1;UBERON:0005946,7.10e-08,1;UBERON:0005965,7.10e-08,1;UBERON:0002078,7.10e-08,1;UBERON:0002363,8.12e-08,1;UBERON:0007645,8.12e-08,1;UBERON:0007647,8.12e-08,1;UBERON:0010115,8.12e-08,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0.293600439334847,1.10799081706375,0.401088894940283,0,0,0,0.515151135268373,0,0,0,0,0,0.619412741790207,20.7138522471948,28.4338384247302,22.229329609527,0,0,0,0,0,0,1.53041946185451,1.28371610830437,0.639337125799041,21.7701858123233,21.9410023383795,28.9832830362232,1.16083695451434,1.70215567407342,3.11411124497787,14.8236712501479,18.7733850631273,23.4563952281526,7.87019353423379,1.47311054395026,3.48108626184973,0.422510572623884,0.425208599930087,0,0.112328631146495,0.450530678524519,0.32145117339416,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0.664601683750863,0.270803863765016,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0.339928028092699,0,0,0.506039384039006,0,0,0,0,0,0,0.236777252044017,0,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.35142424497814,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34444334449382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.924100740528266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60541026151954,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0.569647187174163,0,0,0,0.540031437238115,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0.333926115068718,0.494411622680279,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0.331737779793674,0,0,0,0,0.230850775511391,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,1.26373159256976,0,0,0,0,0,0,0,0,0,0.685946781900644,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0.600420288709789,0,0,0.429765441419957,0,0.279282401272254,0,1.43574604915363,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0.169346664131569,0,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,2.0289608387862,0.628817220398664,0.828478110694391,0,0,0,1.91502377331055,0.544017803369474,0,0,0,0,0,0.122026264901963,0,0,0.443716206147409,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0,0.889811221596536,0,0,0,0,0,0.899606224327209,0,0,0,0.521745061811734,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,1.71315693154527,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6749457282384,0.128458450192919,0,0.319267718114302,0,0,0,0.484426936895553,0,0,0,1.10057159113007,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.255524855279191,0.535701835878287,0,0.606965604236632,0.682986574053893,0.0887023701626388,0,0,0.135939465953663,0,0,0,0.39246546425257,0.157115589916002,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.4582137370881,0,0,0,0.98150233615243,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0,0.437119121007915,0,0.245148321753905,0,0.196308467114945,0,0,0,0.281951753939561,0.128915775947154,0,0.178553938605658,0,0,0,0,0.286679166302903,0,0.135982980381829,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.213233981900981,0,0,0.124149428591716,0,1.90941474834495,0.202117188958219,0,0,0.26940821205835,0.358611026963382,0,0,0,0,0,0,0.366724332548599,0,0,0,0 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|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0.293600439334847,1.10799081706375,0.401088894940283,0,0,0,0.515151135268373,0,0,0,0,0,0.619412741790207,20.7138522471948,28.4338384247302,22.229329609527,0,0,0,0,0,0,1.53041946185451,1.28371610830437,0.639337125799041,21.7701858123233,21.9410023383795,28.9832830362232,1.16083695451434,1.70215567407342,3.11411124497787,14.8236712501479,18.7733850631273,23.4563952281526,7.87019353423379,1.47311054395026,3.48108626184973,0.422510572623884,0.425208599930087,0,0.112328631146495,0.450530678524519,0.32145117339416,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0.664601683750863,0.270803863765016,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0.339928028092699,0,0,0.506039384039006,0,0,0,0,0,0,0.236777252044017,0,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.35142424497814,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34444334449382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.924100740528266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60541026151954,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0.569647187174163,0,0,0,0.540031437238115,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0.333926115068718,0.494411622680279,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0.331737779793674,0,0,0,0,0.230850775511391,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,1.26373159256976,0,0,0,0,0,0,0,0,0,0.685946781900644,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0.600420288709789,0,0,0.429765441419957,0,0.279282401272254,0,1.43574604915363,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0.169346664131569,0,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,2.0289608387862,0.628817220398664,0.828478110694391,0,0,0,1.91502377331055,0.544017803369474,0,0,0,0,0,0.122026264901963,0,0,0.443716206147409,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0,0.889811221596536,0,0,0,0,0,0.899606224327209,0,0,0,0.521745061811734,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,1.71315693154527,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6749457282384,0.128458450192919,0,0.319267718114302,0,0,0,0.484426936895553,0,0,0,1.10057159113007,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.255524855279191,0.535701835878287,0,0.606965604236632,0.682986574053893,0.0887023701626388,0,0,0.135939465953663,0,0,0,0.39246546425257,0.157115589916002,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.4582137370881,0,0,0,0.98150233615243,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0,0.437119121007915,0,0.245148321753905,0,0.196308467114945,0,0,0,0.281951753939561,0.128915775947154,0,0.178553938605658,0,0,0,0,0.286679166302903,0,0.135982980381829,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.213233981900981,0,0,0.124149428591716,0,1.90941474834495,0.202117188958219,0,0,0.26940821205835,0.358611026963382,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | ||
|short_description=p3@GBP1P1 | |||
}} | }} |
Latest revision as of 17:20, 19 September 2015
Short description: | p3@GBP1P1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GBP1P1_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -30bp_to_ENST00000513638, NR_003133, uc009wcy.1_5end |
EntrezGene: | GBP1P1 |
HGNC: | 39561 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.69e-49 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.69e-49 | 42 |
defensive cell | 3.31e-42 | 48 |
phagocyte | 3.31e-42 | 48 |
monopoietic cell | 4.70e-33 | 59 |
monocyte | 4.70e-33 | 59 |
monoblast | 4.70e-33 | 59 |
promonocyte | 4.70e-33 | 59 |
macrophage dendritic cell progenitor | 7.14e-32 | 61 |
myeloid lineage restricted progenitor cell | 3.16e-29 | 66 |
granulocyte monocyte progenitor cell | 9.59e-29 | 67 |
myeloid leukocyte | 1.57e-26 | 72 |
myeloid cell | 1.41e-16 | 108 |
common myeloid progenitor | 1.41e-16 | 108 |
nongranular leukocyte | 2.33e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 1.41e-14 | 120 |
leukocyte | 1.88e-12 | 136 |
hematopoietic oligopotent progenitor cell | 5.61e-10 | 161 |
hematopoietic multipotent progenitor cell | 5.61e-10 | 161 |
hematopoietic stem cell | 2.04e-09 | 168 |
hematopoietic cell | 9.25e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.77e-25 | 76 |
bone element | 6.69e-23 | 82 |
skeletal element | 1.43e-20 | 90 |
immune system | 8.46e-20 | 93 |
hematopoietic system | 1.29e-18 | 98 |
blood island | 1.29e-18 | 98 |
skeletal system | 3.54e-18 | 100 |
hemolymphoid system | 1.41e-16 | 108 |
musculoskeletal system | 8.35e-11 | 167 |
lateral plate mesoderm | 1.75e-10 | 203 |
tricuspid valve | 7.10e-08 | 1 |
right atrium valve | 7.10e-08 | 1 |
outflow tract of atrium | 7.10e-08 | 1 |
outflow part of right atrium | 7.10e-08 | 1 |
right cardiac atrium | 7.10e-08 | 1 |
dura mater | 8.12e-08 | 1 |
future meninx | 8.12e-08 | 1 |
ectomeninx | 8.12e-08 | 1 |
future dura mater | 8.12e-08 | 1 |