FFCP PHASE1:Hg19::chr9:100395724..100395735,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4686 | |EntrezGene=4686 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7658 | |HGNC=7658 | ||
|TSSclassifier=strong | |||
|UniProt=Q09161 | |UniProt=Q09161 | ||
|association_with_transcript=19bp_to_NM_002486,uc004axq.2_5end | |association_with_transcript=19bp_to_NM_002486,uc004axq.2_5end | ||
|cluster_id=chr9:100395724..100395735,+ | |||
|description=CAGE_peak_6_at_NCBP1_5end | |description=CAGE_peak_6_at_NCBP1_5end | ||
|id=chr9:100395724..100395735,+ | |id=chr9:100395724..100395735,+ | ||
|ontology_enrichment_celltype=CL:0002057!8.41e-21!42;CL:0000860!1.22e-20!45;CL:0000738!1.36e-20!140;CL:0000037!4.09e-18!172;CL:0000566!4.09e-18!172;CL:0002031!2.35e-17!124;CL:0002087!4.05e-17!119;CL:0000766!1.38e-16!76;CL:0000988!5.06e-16!182;CL:0002009!5.25e-16!65;CL:0002032!1.31e-15!165;CL:0000837!1.31e-15!165;CL:0000557!1.33e-15!71;CL:0000839!3.16e-15!70;CL:0002194!3.73e-15!63;CL:0000576!3.73e-15!63;CL:0000040!3.73e-15!63;CL:0000559!3.73e-15!63;CL:0000763!2.66e-13!112;CL:0000049!2.66e-13!112 | |ontology_enrichment_celltype=CL:0002057!8.41e-21!42;CL:0000860!1.22e-20!45;CL:0000738!1.36e-20!140;CL:0000037!4.09e-18!172;CL:0000566!4.09e-18!172;CL:0002031!2.35e-17!124;CL:0002087!4.05e-17!119;CL:0000766!1.38e-16!76;CL:0000988!5.06e-16!182;CL:0002009!5.25e-16!65;CL:0002032!1.31e-15!165;CL:0000837!1.31e-15!165;CL:0000557!1.33e-15!71;CL:0000839!3.16e-15!70;CL:0002194!3.73e-15!63;CL:0000576!3.73e-15!63;CL:0000040!3.73e-15!63;CL:0000559!3.73e-15!63;CL:0000763!2.66e-13!112;CL:0000049!2.66e-13!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.70e-22;33!CL:0002057;8.70e-22;33!CL:0000576;6.45e-17;48!CL:0000473;5.42e-15;39!CL:0000234;5.42e-15;39!CL:0000766;4.94e-12;69!CL:0002087;9.95e-10;104!CL:0000624;1.29e-07;6!CL:0000791;2.19e-07;18!CL:0000789;2.19e-07;18!CL:0002419;2.19e-07;18!CL:0000738;6.71e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.25e-32,136;CL:0000860,2.97e-29,42;CL:0002057,2.97e-29,42;CL:0002087,9.16e-27,115;CL:0000037,2.08e-26,168;CL:0002031,2.86e-26,120;CL:0000473,3.94e-25,48;CL:0000234,3.94e-25,48;CL:0000988,1.02e-24,177;CL:0000766,5.21e-24,72;CL:0002009,3.75e-23,61;CL:0002032,9.82e-23,161;CL:0000837,9.82e-23,161;CL:0000557,7.41e-22,67;CL:0002194,8.08e-22,59;CL:0000576,8.08e-22,59;CL:0000040,8.08e-22,59;CL:0000559,8.08e-22,59;CL:0000839,2.85e-21,66;CL:0000763,1.73e-17,108;CL:0000049,1.73e-17,108;CL:0000624,1.73e-07,6;CL:0000134,2.88e-07,354;CL:0000791,4.60e-07,18;CL:0000789,4.60e-07,18;CL:0002420,4.60e-07,18;CL:0002419,4.60e-07,18;CL:0000790,4.60e-07,18;CL:0002320,8.08e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;8.35e-21;42!CL:0000790;2.19e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.39e-11!102;UBERON:0003061!1.39e-11!102;UBERON:0001474!1.90e-11!86;UBERON:0002371!6.77e-11!80;UBERON:0002193!6.21e-10!112;UBERON:0004765!5.69e-09!101;UBERON:0001434!5.69e-09!101;UBERON:0002405!7.83e-08!115 | |ontology_enrichment_uberon=UBERON:0002390!1.39e-11!102;UBERON:0003061!1.39e-11!102;UBERON:0001474!1.90e-11!86;UBERON:0002371!6.77e-11!80;UBERON:0002193!6.21e-10!112;UBERON:0004765!5.69e-09!101;UBERON:0001434!5.69e-09!101;UBERON:0002405!7.83e-08!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.70e-17,82;UBERON:0002371,3.40e-17,76;UBERON:0002390,3.91e-17,98;UBERON:0003061,3.91e-17,98;UBERON:0004765,5.74e-15,90;UBERON:0002405,2.23e-14,93;UBERON:0002193,2.52e-14,108;UBERON:0001434,1.58e-13,100 | |||
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| ||
|short_description=p6@NCBP1 | |short_description=p6@NCBP1 | ||
}} | }} |
Latest revision as of 17:42, 19 September 2015
Short description: | p6@NCBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NCBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_NM_002486, uc004axq.2_5end |
EntrezGene: | NCBP1 |
HGNC: | 7658 |
UniProt: | Q09161 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 9.25e-32 | 136 |
classical monocyte | 2.97e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.97e-29 | 42 |
nongranular leukocyte | 9.16e-27 | 115 |
hematopoietic stem cell | 2.08e-26 | 168 |
hematopoietic lineage restricted progenitor cell | 2.86e-26 | 120 |
defensive cell | 3.94e-25 | 48 |
phagocyte | 3.94e-25 | 48 |
hematopoietic cell | 1.02e-24 | 177 |
myeloid leukocyte | 5.21e-24 | 72 |
macrophage dendritic cell progenitor | 3.75e-23 | 61 |
hematopoietic oligopotent progenitor cell | 9.82e-23 | 161 |
hematopoietic multipotent progenitor cell | 9.82e-23 | 161 |
granulocyte monocyte progenitor cell | 7.41e-22 | 67 |
monopoietic cell | 8.08e-22 | 59 |
monocyte | 8.08e-22 | 59 |
monoblast | 8.08e-22 | 59 |
promonocyte | 8.08e-22 | 59 |
myeloid lineage restricted progenitor cell | 2.85e-21 | 66 |
myeloid cell | 1.73e-17 | 108 |
common myeloid progenitor | 1.73e-17 | 108 |
CD4-positive, alpha-beta T cell | 1.73e-07 | 6 |
mesenchymal cell | 2.88e-07 | 354 |
mature alpha-beta T cell | 4.60e-07 | 18 |
alpha-beta T cell | 4.60e-07 | 18 |
immature T cell | 4.60e-07 | 18 |
mature T cell | 4.60e-07 | 18 |
immature alpha-beta T cell | 4.60e-07 | 18 |
connective tissue cell | 8.08e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.70e-17 | 82 |
bone marrow | 3.40e-17 | 76 |
hematopoietic system | 3.91e-17 | 98 |
blood island | 3.91e-17 | 98 |
skeletal element | 5.74e-15 | 90 |
immune system | 2.23e-14 | 93 |
hemolymphoid system | 2.52e-14 | 108 |
skeletal system | 1.58e-13 | 100 |