FFCP PHASE1:Hg19::chr9:100395724..100395735,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4686 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7658 | |||
|TSSclassifier=strong | |||
|UniProt=Q09161 | |||
|association_with_transcript=19bp_to_NM_002486,uc004axq.2_5end | |||
|cluster_id=chr9:100395724..100395735,+ | |||
|description=CAGE_peak_6_at_NCBP1_5end | |||
|id=chr9:100395724..100395735,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.41e-21!42;CL:0000860!1.22e-20!45;CL:0000738!1.36e-20!140;CL:0000037!4.09e-18!172;CL:0000566!4.09e-18!172;CL:0002031!2.35e-17!124;CL:0002087!4.05e-17!119;CL:0000766!1.38e-16!76;CL:0000988!5.06e-16!182;CL:0002009!5.25e-16!65;CL:0002032!1.31e-15!165;CL:0000837!1.31e-15!165;CL:0000557!1.33e-15!71;CL:0000839!3.16e-15!70;CL:0002194!3.73e-15!63;CL:0000576!3.73e-15!63;CL:0000040!3.73e-15!63;CL:0000559!3.73e-15!63;CL:0000763!2.66e-13!112;CL:0000049!2.66e-13!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.70e-22;33!CL:0002057;8.70e-22;33!CL:0000576;6.45e-17;48!CL:0000473;5.42e-15;39!CL:0000234;5.42e-15;39!CL:0000766;4.94e-12;69!CL:0002087;9.95e-10;104!CL:0000624;1.29e-07;6!CL:0000791;2.19e-07;18!CL:0000789;2.19e-07;18!CL:0002419;2.19e-07;18!CL:0000738;6.71e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.25e-32,136;CL:0000860,2.97e-29,42;CL:0002057,2.97e-29,42;CL:0002087,9.16e-27,115;CL:0000037,2.08e-26,168;CL:0002031,2.86e-26,120;CL:0000473,3.94e-25,48;CL:0000234,3.94e-25,48;CL:0000988,1.02e-24,177;CL:0000766,5.21e-24,72;CL:0002009,3.75e-23,61;CL:0002032,9.82e-23,161;CL:0000837,9.82e-23,161;CL:0000557,7.41e-22,67;CL:0002194,8.08e-22,59;CL:0000576,8.08e-22,59;CL:0000040,8.08e-22,59;CL:0000559,8.08e-22,59;CL:0000839,2.85e-21,66;CL:0000763,1.73e-17,108;CL:0000049,1.73e-17,108;CL:0000624,1.73e-07,6;CL:0000134,2.88e-07,354;CL:0000791,4.60e-07,18;CL:0000789,4.60e-07,18;CL:0002420,4.60e-07,18;CL:0002419,4.60e-07,18;CL:0000790,4.60e-07,18;CL:0002320,8.08e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;8.35e-21;42!CL:0000790;2.19e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.39e-11!102;UBERON:0003061!1.39e-11!102;UBERON:0001474!1.90e-11!86;UBERON:0002371!6.77e-11!80;UBERON:0002193!6.21e-10!112;UBERON:0004765!5.69e-09!101;UBERON:0001434!5.69e-09!101;UBERON:0002405!7.83e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.70e-17,82;UBERON:0002371,3.40e-17,76;UBERON:0002390,3.91e-17,98;UBERON:0003061,3.91e-17,98;UBERON:0004765,5.74e-15,90;UBERON:0002405,2.23e-14,93;UBERON:0002193,2.52e-14,108;UBERON:0001434,1.58e-13,100 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,1.26343974685366,0.261185628199839,0.737201809504527,0,0.655324116390517,0.527533956456907,0,0,0.672325146451775,0,0.730310090387373,0.975865597581014,0.61560529038394,0.408001382488506,0.940364164434263,0.85870796139317,1.23186982565596,0.627713197974014,0.687720651731561,0.328402357799783,0.787107813136792,1.57345710739562,4.60595277716655,1.70297735647684,0,0.6024118375565,1.84877005083394,1.62681121218633,1.9903692548239,0.587200878669695,3.87796785972314,2.80762226458198,4.12320654360118,0,0.647787332037959,0.257575567634187,1.89017710413434,0.755751887377619,1.21292030593908,1.85943229524548,2.46700732813095,4.02618282163635,2.8769239232215,3.84241059793651,6.3850202069918,6.20542225325913,3.22742341791913,4.06279459783025,2.63539275359647,1.36453075028923,1.12361742222542,4.28517449319264,3.20929027076094,3.19668562899521,3.62836430205388,2.79249120670285,2.55734850319616,4.06292934080018,6.80862269629368,3.11411124497787,4.27122730936464,7.82224377630302,4.77815458351257,3.63239701580021,6.99727508376373,5.69632297393592,0.633765858935825,1.4882300997553,1.46761051855863,0.898629049171961,1.05123824989054,1.44653028027372,2.85012743741249,2.78483348078726,2.37463399894024,0,0,0,1.28019066769952,0.400395987036012,0.574752439954483,0,0,1.1384259382189,1.17447437874188,1.52909291250092,5.28685314316103,2.80254281490768,0.790152254325231,11.4091666666023,7.8602152549833,5.55124047298675,0.167186495390678,6.19252306603822,3.78758244587787,3.89653456815823,0.334231370655521,2.06224135232386,2.65840673500345,1.62482318259009,0.896639238079726,0.780356085359269,0.493313713811028,1.38175008892924,1.44901542867526,2.37258501059297,2.40786745280742,1.04535523804977,0.906474741580529,4.59864592322305,6.52892146416997,1.77113784413652,0.318565414324097,0,0,1.35517607169996,1.15187950038977,1.24930726552346,1.18388626022008,0,5.64498881029251,4.27904313253612,5.35850294366356,2.43806866313962,0,0.255725123687061,1.0843174571537,0,0.144846518960824,0.795285947051099,0,0.283604451492204,0.221729397462564,0.527008714158756,0.916853528483988,0,0.370784442784429,0.649094787309367,0.696518949197069,0.531831842075461,2.62339686735876,3.43196946468077,4.82894751728434,0.596287222100115,0,0.694281003215189,0.56530794192401,1.25849830862972,0,0.417989933073621,0.258416759169329,1.06729878806013,0.33472061276467,0,0,0.732186172644509,1.10298924103761,0,0.714397826272638,0.22452937262617,0.900891843866578,1.53316637465883,1.89853131913626,0.366403487860815,3.9534125230819,0,0,0.496971951695318,0.886413581652058,1.85372853138506,0.286836620748814,0.354668382198357,0.560677600142307,0,0.74000264525148,0.311211035399766,0.269421344139376,0.817309515567294,0.302714855289863,0,0,0,1.1409436430889,0.298897361103602,0.469737994575059,0.323745888736263,0.280901613404497,0.204154171254893,0.61417158655884,0.516628905878827,0,0.247266929278557,0,0.718618141816238,1.0100166837244,0.750711119231785,1.10825646193673,0.877955241761676,0.612975591598039,0.45071417671979,1.02088964844019,1.61450672119976,0.213557388818567,0,0.600182192168805,0.103052529238439,0.515281080091258,0.558350568994769,1.35021065793013,0.487185025805993,1.26216887122057,0.552299391853796,0.484938170456436,0.710019185033229,0.806016785821122,0.508681776931463,2.12586938479627,0.272746120590835,1.43402297694502,1.58565817968474,1.19276791489337,0.929551542956147,1.0366105501537,2.52320850875628,1.82488679537915,0,0,2.76269842704961,1.39310378409594,0.721879481669586,0.236613600079688,0.674338760312407,0.482022059766964,0.441175890929576,0.653638332277218,0.71181185733329,0.404493924480493,1.17732879075208,0,0,0,0.4115740113314,1.47008711385542,0,0,0.590789906681404,5.29755719297581,0.737930631258681,0.343135620597051,0.658501712451753,1.1240175325762,0.502644862058154,0.555530670951178,0.651616610620649,1.03993478527958,2.88662684050547,0.695582429850461,0.70445216541493,0.721832238805369,0,0.380508304469197,0.790204397959275,0,0.738651018262192,0.234004265139238,0.743155811443641,0,0.839910640994298,0.283550194484773,0.0895585227028483,0,0,0.492663237895943,0.264145302039678,0.621984346622316,1.44119953416961,0.6312121671319,0.507983154337352,0.381988425558278,0,0,0.719792448923265,0,0.571652865261156,0.784917590417525,1.74384027533312,0.7333828582095,0.517086863031111,0,0,0.797814349754612,0,0.514414748524284,0,0.266422179016099,0.142977993658148,0.542621605391443,0.823240336780769,1.30294473717494,1.42156779497018,0.791951872933429,0.301439377059586,0,0.699810938274399,0,0,2.10833939483032,0.239624855491583,0,0,1.30303176000821,1.02738161275192,0.895304816199478,0.784596007954691,4.72873824484625,5.39068937148793,3.59360501583295,0.508189248444927,0,0.773288812777695,1.00509759200609,1.27587750330633,1.49801404789436,2.99161459204025,2.48649308061621,0.12269149171914,1.00034104211935,0.271265023699736,0,0.535286966391485,0.157702415033935,0.35142424497814,0,2.27407504055985,0,0,0.368738337083406,0.60818530127658,0,0.343143423810856,3.72182447021197,3.23571301227925,3.41528184971022,1.5156378572313,0,0.604780586659361,0,1.07423381301644,0,0.512556597022804,0.511707249066704,0.321707842287215,0,0.462629081407967,0.177561725313127,0.246381468041427,0.519254429183621,0.348631135379878,0.846016147141356,1.40354529212299,1.28913384510255,1.14814448164607,0.546273504020151,0.655622074797121,0.902399225814824,0.693138033939733,0.784349769176855,0,0.316654886678627,0,0.340187410553031,1.0795795805107,0,0,0.501689773854853,0.764628819135115,0.831076008928724,0.223874754722178,2.19259876645935,2.87578996127391,0.256450125116389,0.656029291399411,0,0.721287081534056,1.83138929636687,0.990113999047056,2.29706215198469,2.60024098414608,0,0.193341436584244,0.154048617114644,0.767518373630648,0.551346289938122,0.214840489736547,0.435050081742686,0.596586391912706,1.24644849905432,0.661139661443912,1.15314040419064,1.91419068741876,0.910420027699949,0.464845549297286,1.5740617341532,0.6970372701606,0.308033580176089,0.532306030317022,0,0.18532421910392,0.715624433709956,0.744316738719335,0.316379424718726,0,0.511795582622668,0.42793898803392,0,0.78494864019923,0.899362287916574,0.54907405947211,0.471249609382746,0.808729926293264,0,0.421258456238981,0.975267478179181,0.731140468893853,0,0.818999468447914,0.565621727814851,0,0,0,0,1.15755106853338,0,0.608731130888112,0,0.281695602532241,1.00387946542836,0.491245205065606,0.7133421029625,0,0,0.329294892959902,1.51789269506286,0.699869440489966,0.48111056362756,1.34060455107157,0,1.12972560932135,0.43050537267123,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.476463550915578,0.411362273086194,1.94541993357815,0.540031437238115,0,0.534120355637366,0,1.47024129588619,0.185803175125719,1.44269212976445,0.853702120180969,1.59426272728822,0.798317485731266,0.383010740264733,0.211673582723883,0.649243880549111,0,0.228234679033192,0.783399478865116,2.50634477090067,0.169291777801603,0.481764225311099,0.201799707191048,0,0.687010689511529,1.84344458585075,2.46043718681657,1.50164227540718,0.976940477010201,1.11362469558097,0,0.811367035427949,0.33307196799782,0,1.49712432326576,0.439524537815682,1.21360521749513,0.222886768554957,0.568272293612826,0.23874448473769,0.296964680832639,0.307160702099232,0,0.422008249231538,0.445234820091624,1.6480387422676,1.05562704063997,0.398495976502139,0,0.755798243562828,0.613612095012929,0.246169610922139,0.933118762985422,0.539210106883961,0.716084698702437,0.511572370226872,0.493217028184668,0,0,0,0.278304294485554,1.99613798001194,1.82299432759663,0,0,0.455173793141999,1.27126825146383,0.709163045303809,0.689486746482929,0.874813840149763,0.347249989866585,0,0.723578631752448,0,0.331737779793674,0,0,2.94133851501273,1.39423744278603,0.153900517007594,0.91153644677601,0.922255617552241,0.628303510868405,0.325942115766024,0.957003479195758,0.457987967009312,0,2.04386596391473,0.941881538370149,0.166211681900156,1.57916962432026,0.784250137270958,1.84603745673427,1.13852239634511,0.794682894901893,0.421996129056054,0.326465616318295,0.565412285735763,0.865554558968364,0,0.176915129006678,0,1.18608451472249,0.617819694732514,1.14864144456001,0.202203398942031,0,0.468528891450678,1.094728735294,0.978323094660449,1.21390189767046,0,0,0,0.821425535170343,0.150323419414493,0.933193722575224,0.664653872707185,0.661983911750998,1.88359751044335,1.19472429772959,1.42304773014896,0.277349346026277,0.867798691675654,0.293977192243133,0.870592065804026,0.34945333648406,0.171986032471617,1.16107597546902,0.584714536689484,1.06750094169172,0.484945082442097,1.85337866052151,0,0.137041924646751,0.19871461170299,0,1.56441106187842,0.64127056201227,0.640358984218058,1.19885765749278,0.144090417154106,0.458146384663663,0.857974989309823,1.58460277786965,0.99402028452346,1.41416420770077,0.407712618220842,0.523014231561666,0.305994652908965,0,0,0.273810757783986,2.55493176133945,0.429765441419957,0.262887354279314,1.67569440763353,0.229160424011684,0,0.798716001995964,0.858452096273142,0.446342914883745,0.940568614814168,0,1.16495949527454,0.393915911536118,0.247247575143499,0.606631894687664,1.77169466726548,0.846733320657845,0.795229689809303,0.408610218334727,4.34033500855552,2.88832816854191,2.07720169014593,1.349843349309,5.41661368190565,0.242998226632099,0.670869375198532,0.236417121897595,0.734364233889974,0.950403028674658,1.07572403599707,0.959575986597226,0,1.32418394073086,0.76280561296425,0,0.864221491201268,0.326587360109409,0,0.328370082997356,0.170388021785422,0.566560457600628,0.439656701034247,1.32506888912221,0.517131825446202,0.79339561045614,0.513260513652988,0,1.06787412567695,0.78602152549833,0.414239055347196,0.496166021811951,0.988058159489721,0.365377795142688,0,1.08803560673895,0.2506898940227,0.919036730290385,0,0.628216385000937,0,0.122026264901963,0.250381861413,0.573409195690071,0.443716206147409,0.683060432355218,0.138348634936231,0.499921631848426,0.303298235083296,0,0,1.40500471742064,1.59413131471908,0.74627401443437,0.233713309847224,1.66441758450784,0,0,0,0.915360273587694,0.756154618816195,0.621748802331122,0.73927574994817,0.796483835818512,0.899606224327209,0.155262956876259,0,0,1.5652351854352,0.300515217994437,0.761610424337591,0.406870733204662,0.545545977607678,0.751873899297419,0.464033759878494,0.796191777397232,0.800055529326307,0,0,0,0.385239660814607,0.214441591374926,1.30497145982606,0.226705925512272,0.926089897295336,0.244736704506468,0.71635536432595,0.617602894321944,0.657852148736121,1.23682402162117,0.38582807654183,0.675769762612291,0.256241518587947,0.690860683462397,0.607719912354764,0.414775308455192,0.389720617678777,0.797189041880179,0.327130788511688,1.31043939538565,0.491545817507439,0.845248493434508,0.79994958341972,0.853533837553127,0.172214979660816,0.567515953566836,0.920529751259204,2.09819261579167,0,1.15104934173287,1.29389773676018,0.314531883711793,0.327628914576042,0.848662649770126,1.91317428091515,2.23084375666204,2.79322458986622,0,0.94634094001504,0,0.705351887381368,0.6124909547064,0.513833800771676,0,0.319267718114302,0,0.252071696221718,0.138314504928436,0.161475645631851,1.42769420259154,0.88332946650923,1.41563668017288,1.46742878817343,0.462102664601353,0.762764190934334,0,1.79024599904647,0.376051641746286,0,0,1.30953347240711,1.14640342257068,1.18284868973636,0.135075169236789,0.781078098613847,0.206686796501184,0.19024743058172,1.09394961803644,0.548257766857182,0.496211178389294,1.40696995487696,0.255524855279191,0,1.00885116665647,1.21393120847326,1.82129753081038,0.975726071789027,0.806637912890455,0.342976018874837,0.271878931907327,0.197318320688547,0.590969204419841,0.111231401892069,0.313972371402056,0.314231179832004,0.840816489941367,0.913158720509496,0,0,0.500335809236594,1.10609528212909,0.697448552208751,0.173858272302579,0.801711364730253,0,0.17071847709395,0,0.860454717640555,0.946656005844523,0.681707238073262,0.423387050190929,1.3746412112643,0.31020638566432,1.91107787795487,1.11855431797792,0.785201868921944,0.365753774946808,1.29485767437579,0.410651227424988,1.1598144313382,1.45713297917742,1.87151570769685,0.397901550322736,0.237840181555137,0.90356865631168,0.659643100472575,0.301925687133347,0.385870790539723,0.218559560503957,0.940634592723046,0.245148321753905,1.17838273550813,0.392616934229891,0,0.4226557275834,1.0195626881269,0.187967835959707,0.580120991762195,0.599646935549574,0.535661815816973,1.05868461514708,1.84555143385087,0,0.458729283404541,0.286679166302903,1.41994405973866,0.203974470572744,1.30905207102113,0.5290268405154,0.371995018166751,0.462175628631418,0,0.883164973845552,1.20192129160065,1.39368351112581,1.63182127587171,0.801652215796681,2.02168778976659,2.005660314339,1.97024615367422,2.67964130156179,0,0.310298987585686,0.852935927603924,0.476128862927481,5.03793496720848,3.5382587148639,0.672791175483681,0.700118741059814,0.808468755832877,0.435433495793923,0.342233301085281,0.875576689189638,0.717222053926764,1.66330178273007,0.814032686109745,0.533636729388577,0,0.449126010532934,0,0.855690109280065,0.406896178315738,1.33151354837103,0.201273793591026,0.320568492303233 | |||
|short_description=p6@NCBP1 | |||
}} |
Latest revision as of 17:42, 19 September 2015
Short description: | p6@NCBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NCBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_NM_002486, uc004axq.2_5end |
EntrezGene: | NCBP1 |
HGNC: | 7658 |
UniProt: | Q09161 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 9.25e-32 | 136 |
classical monocyte | 2.97e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.97e-29 | 42 |
nongranular leukocyte | 9.16e-27 | 115 |
hematopoietic stem cell | 2.08e-26 | 168 |
hematopoietic lineage restricted progenitor cell | 2.86e-26 | 120 |
defensive cell | 3.94e-25 | 48 |
phagocyte | 3.94e-25 | 48 |
hematopoietic cell | 1.02e-24 | 177 |
myeloid leukocyte | 5.21e-24 | 72 |
macrophage dendritic cell progenitor | 3.75e-23 | 61 |
hematopoietic oligopotent progenitor cell | 9.82e-23 | 161 |
hematopoietic multipotent progenitor cell | 9.82e-23 | 161 |
granulocyte monocyte progenitor cell | 7.41e-22 | 67 |
monopoietic cell | 8.08e-22 | 59 |
monocyte | 8.08e-22 | 59 |
monoblast | 8.08e-22 | 59 |
promonocyte | 8.08e-22 | 59 |
myeloid lineage restricted progenitor cell | 2.85e-21 | 66 |
myeloid cell | 1.73e-17 | 108 |
common myeloid progenitor | 1.73e-17 | 108 |
CD4-positive, alpha-beta T cell | 1.73e-07 | 6 |
mesenchymal cell | 2.88e-07 | 354 |
mature alpha-beta T cell | 4.60e-07 | 18 |
alpha-beta T cell | 4.60e-07 | 18 |
immature T cell | 4.60e-07 | 18 |
mature T cell | 4.60e-07 | 18 |
immature alpha-beta T cell | 4.60e-07 | 18 |
connective tissue cell | 8.08e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.70e-17 | 82 |
bone marrow | 3.40e-17 | 76 |
hematopoietic system | 3.91e-17 | 98 |
blood island | 3.91e-17 | 98 |
skeletal element | 5.74e-15 | 90 |
immune system | 2.23e-14 | 93 |
hemolymphoid system | 2.52e-14 | 108 |
skeletal system | 1.58e-13 | 100 |