FFCP PHASE1:Hg19::chr18:47721508..47721549,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4645 | |EntrezGene=4645 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7603 | |HGNC=7603 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULV0,Q7Z7A5,Q9H6Y6 | |UniProt=Q9ULV0,Q7Z7A5,Q9H6Y6 | ||
|association_with_transcript=-57bp_to_ENST00000285039,NM_001080467,uc002leb.2_5end | |association_with_transcript=-57bp_to_ENST00000285039,NM_001080467,uc002leb.2_5end | ||
|cluster_id=chr18:47721508..47721549,- | |||
|description=CAGE_peak_3_at_MYO5B_5end | |description=CAGE_peak_3_at_MYO5B_5end | ||
|id=chr18:47721508..47721549,- | |id=chr18:47721508..47721549,- | ||
|ontology_enrichment_celltype=CL:0000066!1.41e-15!254;CL:0002076!9.46e-09!43;CL:0000223!1.93e-08!59 | |ontology_enrichment_celltype=CL:0000066!1.41e-15!254;CL:0002076!9.46e-09!43;CL:0000223!1.93e-08!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.84e-12,253;CL:0002076,5.39e-07,42;CL:0000223,8.88e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.37e-10;30!UBERON:0008947;1.21e-07;29 | |||
|ontology_enrichment_disease=DOID:305!3.97e-20!106;DOID:0050687!8.44e-14!143;DOID:299!2.28e-07!25 | |ontology_enrichment_disease=DOID:305!3.97e-20!106;DOID:0050687!8.44e-14!143;DOID:299!2.28e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:299;3.44e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.38e-14,106;DOID:0050687,1.00e-09,143;DOID:299,4.19e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0000064!8.82e-15!219;UBERON:0007023!8.40e-14!115;UBERON:0004119!2.57e-13!169;UBERON:0000925!2.57e-13!169;UBERON:0006595!2.57e-13!169;UBERON:0004921!3.20e-12!129;UBERON:0004185!3.20e-12!129;UBERON:0001007!3.64e-12!155;UBERON:0001555!3.64e-12!155;UBERON:0007026!3.64e-12!155;UBERON:0000062!1.22e-11!511;UBERON:0000077!2.54e-11!130;UBERON:0001004!5.81e-11!72;UBERON:0000481!1.43e-09!347;UBERON:0004121!1.69e-09!169;UBERON:0000466!2.81e-09!126;UBERON:0000065!2.81e-09!53;UBERON:0000464!3.86e-09!104;UBERON:0005743!6.81e-09!86;UBERON:0003056!1.00e-08!61;UBERON:0000924!1.14e-08!173;UBERON:0006601!1.14e-08!173;UBERON:0008947!1.26e-08!38;UBERON:0003258!1.26e-08!38;UBERON:0002780!1.40e-08!41;UBERON:0001890!1.40e-08!41;UBERON:0006240!1.40e-08!41;UBERON:0000153!3.07e-08!129;UBERON:0007811!3.07e-08!129;UBERON:0005911!3.18e-08!82;UBERON:0001041!3.25e-08!98;UBERON:0001017!3.35e-08!82;UBERON:0003080!4.02e-08!42;UBERON:0005153!5.70e-08!37;UBERON:0003075!8.34e-08!86;UBERON:0007284!8.34e-08!86;UBERON:0000033!1.06e-07!123;UBERON:0005157!1.25e-07!51;UBERON:0000922!1.69e-07!612;UBERON:0000956!2.04e-07!25;UBERON:0000203!2.04e-07!25;UBERON:0002619!2.09e-07!22;UBERON:0005177!3.38e-07!107;UBERON:0001869!4.54e-07!32;UBERON:0000072!6.60e-07!46;UBERON:0000073!7.74e-07!94;UBERON:0001016!7.74e-07!94;UBERON:0001049!8.42e-07!57;UBERON:0005068!8.42e-07!57;UBERON:0006241!8.42e-07!57;UBERON:0007135!8.42e-07!57;UBERON:0002346!9.04e-07!90;UBERON:0001950!9.77e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;7.08e-08;49!UBERON:0000058;2.81e-07;10!UBERON:0002048;2.82e-07;22!UBERON:0000117;2.82e-07;22!UBERON:0000171;2.82e-07;22!UBERON:0000170;2.82e-07;22!UBERON:0002619;7.46e-07;22!UBERON:0001950;9.08e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.61e-10,160;UBERON:0000925,1.61e-10,160;UBERON:0006595,1.61e-10,160;UBERON:0011216,3.31e-10,223;UBERON:0004921,4.02e-10,118;UBERON:0001007,3.65e-09,145;UBERON:0001555,3.65e-09,145;UBERON:0007026,3.65e-09,145;UBERON:0005911,6.00e-09,82;UBERON:0005177,1.68e-08,101;UBERON:0005153,4.72e-08,37;UBERON:0001004,4.75e-08,74;UBERON:0009569,1.31e-07,112;UBERON:0001041,1.53e-07,87;UBERON:0000065,2.24e-07,54;UBERON:0006554,3.13e-07,47;UBERON:0002048,3.79e-07,22;UBERON:0000117,3.79e-07,22;UBERON:0000171,3.79e-07,22;UBERON:0000170,3.79e-07,22;UBERON:0005597,3.79e-07,22;UBERON:0000118,3.79e-07,22;UBERON:0001008,6.16e-07,48;UBERON:0002619,6.52e-07,22;UBERON:0001950,7.89e-07,20;UBERON:0007023,8.42e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.72013755551056,1.39560233594486,1.74753097704138,1.05506791291381,0,0,0,0,0,0,0.492484232307152,0,0,0.572471974262113,0.136874425072884,0.125542639594803,2.13957536094264,1.88831355734875,2.04648031415566,0,0,0,0,0.6024118375565,1.10926203050036,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0.400395987036012,0,0,0,0.569212969109448,0,0,0,0,0,0,1.17903228824749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.144846518960824,1.5905718941022,1.45990461090791,0.756278537312543,0.221729397462564,0.175669571386252,2.29213382120997,0.364295288292542,1.11235332835329,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0.468642863667593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70565194428616,2.18196896472668,0.573609190778008,3.29329006549908,2.78312513475119,3.02104251460748,2.90250954043037,3.28017106138317,2.91981887260664,0,0,0,0,0,1.53798840051797,1.18009283054671,0.964044119533928,0.992645754591546,1.30727666455444,1.42362371466658,0.674156540800822,0.784885860501384,0.769494313892781,0,0,0,0,0,0,0.590789906681404,0,2.09080345523293,0.343135620597051,0.98775256867763,0,0,0.462942225792648,0.325808305310325,0,0,4.75314660397815,0.469634776943287,0,0,0,3.95102198979638,2.57545848628462,0,0,0,0.93733833986777,0.839910640994298,0.283550194484773,1.34337784054272,1.16253575405585,0.383382679165211,0,0.088048434013226,0.207328115540772,0.288239906833923,0.25248486685276,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1532569512047,2.61460037580088,7.79789331220045,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0.215627574859517,0,3.55732473911449,2.60279707715243,2.31986643833309,5.19300422536481,3.18969375826582,0,0,0,0.12269149171914,0,0,0,0,0,0,0.601892199455438,0,0,0,0.184369168541703,0,0,0,0,0,0,1.5156378572313,0,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,2.53804844142407,1.00253235151642,6.44566922551274,0,0,0.524497659837696,7.21919380651859,10.5511011833048,0.784349769176855,0,4.43316841350078,0,0,0,0,0.812839312631559,1.50506932156456,3.82314409567557,4.98645605357235,1.34324852833307,0,0,1.02580050046556,2.29610251989794,0,1.75169719801128,0,0,0,0.650060246036521,0,0,0,0.15350367472613,0,0,0,0,0,1.65284915360978,1.72971060628596,1.40373983744043,2.12431339796655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0.673554789078584,0,2.17781969722645,1.88287601553558,0,0,0.443430153536676,1.1486170010348,0,0,0,0.238231775457789,0,0,0,0,0,1.92495971052672,0.245040215981032,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36852972734796,0.146508179271894,0,10.475678122083,3.69376990848337,6.20735660317994,3.8605408508243,5.22173193568695,0,0.844016498463076,0.333926115068718,0,0,4.5827037297746,1.10513566212459,7.05411693991973,28.1238876880926,1.10776324914963,0,1.3480252672099,3.75944466818779,0,0.493217028184668,0,0,0.969332746095218,0.74214478529481,7.98455192004777,2.3438498497671,10.7575799995321,0,0.1137934482855,4.57656570526979,2.6002644994473,0,0,0.347249989866585,0,0.361789315876224,0,0.110579259931225,0,1.09692698576986,0,4.3221360726367,3.46276163267087,7.06440746251407,2.07507513949254,5.02642808694724,9.99555821682474,2.23300811812344,0.457987967009312,1.06606955203727,0,0,0,0,0,0,0,0,10.9718993554574,2.12202650606892,3.25112064298064,11.4685979063308,0.995261931078505,0.619202951523374,1.22206028986725,6.8199859596543,3.33622635155558,3.9680340812073,0.471807930864739,0.802577647298789,0.234264445725339,0,0.978323094660449,0,1.97292201424695,0,2.75465485467441,1.26373159256976,8.71875832604057,4.25121584728713,0,0,0,0,1.13843818411917,0,5.0332324117188,1.27390116638691,2.43765778425127,2.09672001890436,0.171986032471617,0.0967563312890851,0.146178634172371,0,2.90967049465258,0.441280633457501,8.81324889044077,1.78154502040776,0,1.7727022867646,1.17330829640882,4.00794101257669,0.85381197895741,0.799238438328521,0.72045208577053,0,0,0,0,1.88555227693436,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,0,0.458320848023367,0.717873024576814,1.99679000498991,0.429226048136571,0.223171457441873,0.201550417460179,0,1.16495949527454,1.49688046383725,1.07140615895516,2.62873821031321,0,0,2.38568906942791,0.953423842781029,0.321506296930038,0.550157746388935,0.415440338029185,1.1248694577575,8.51182150013745,1.27574068981852,0.670869375198532,2.99461687736953,3.98654869825986,4.75201514337329,1.07572403599707,2.1110671705139,2.1440859791201,0,0,0,0,0,0,0,0,0,1.17241786942466,1.32506888912221,0.387848869084652,0.39669780522807,0.342173675768659,1.40963004463334,2.24253566392159,1.25763444079733,2.89967338743037,0.496166021811951,0.988058159489721,0,0,0,0,0,0,1.72759505875258,2.65820453990096,0.85418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| ||
|short_description=p3@MYO5B | |short_description=p3@MYO5B | ||
}} | }} |
Latest revision as of 18:11, 19 September 2015
Short description: | p3@MYO5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MYO5B_5end |
Coexpression cluster: | NA |
Association with transcript: | -57bp_to_ENST00000285039, NM_001080467, uc002leb.2_5end |
EntrezGene: | MYO5B |
HGNC: | 7603 |
UniProt: | Q9ULV0Q7Z7A5Q9H6Y6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.84e-12 | 253 |
endo-epithelial cell | 5.39e-07 | 42 |
endodermal cell | 8.88e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.61e-10 | 160 |
endoderm | 1.61e-10 | 160 |
presumptive endoderm | 1.61e-10 | 160 |
organ system subdivision | 3.31e-10 | 223 |
subdivision of digestive tract | 4.02e-10 | 118 |
digestive system | 3.65e-09 | 145 |
digestive tract | 3.65e-09 | 145 |
primitive gut | 3.65e-09 | 145 |
endo-epithelium | 6.00e-09 | 82 |
trunk region element | 1.68e-08 | 101 |
epithelial bud | 4.72e-08 | 37 |
respiratory system | 4.75e-08 | 74 |
subdivision of trunk | 1.31e-07 | 112 |
foregut | 1.53e-07 | 87 |
respiratory tract | 2.24e-07 | 54 |
urinary system structure | 3.13e-07 | 47 |
lung | 3.79e-07 | 22 |
respiratory tube | 3.79e-07 | 22 |
respiration organ | 3.79e-07 | 22 |
pair of lungs | 3.79e-07 | 22 |
lung primordium | 3.79e-07 | 22 |
lung bud | 3.79e-07 | 22 |
renal system | 6.16e-07 | 48 |
regional part of cerebral cortex | 6.52e-07 | 22 |
neocortex | 7.89e-07 | 20 |
adult organism | 8.42e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.38e-14 | 106 |
cell type cancer | 1.00e-09 | 143 |
adenocarcinoma | 4.19e-07 | 25 |