FFCP PHASE1:Hg19::chr3:93783297..93783327,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=63899 | |EntrezGene=63899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=26208 | |HGNC=26208 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_HQ447621_5end | |association_with_transcript=18bp_to_HQ447621_5end | ||
|cluster_id=chr3:93783297..93783327,+ | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_4_at_NSUN3_5end | |description=CAGE_peak_4_at_NSUN3_5end | ||
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|ontology_enrichment_celltype=CL:0002194!8.20e-29!63;CL:0000576!8.20e-29!63;CL:0000040!8.20e-29!63;CL:0000559!8.20e-29!63;CL:0002057!1.07e-28!42;CL:0000839!7.64e-28!70;CL:0002009!1.77e-27!65;CL:0000860!5.56e-26!45;CL:0000766!5.35e-24!76;CL:0000557!6.17e-24!71;CL:0000763!5.59e-17!112;CL:0000049!5.59e-17!112;CL:0002031!8.89e-14!124;CL:0002087!4.38e-13!119;CL:0000738!2.43e-10!140;CL:0002032!4.30e-10!165;CL:0000837!4.30e-10!165;CL:0000037!4.40e-09!172;CL:0000566!4.40e-09!172;CL:0000988!3.00e-08!182 | |ontology_enrichment_celltype=CL:0002194!8.20e-29!63;CL:0000576!8.20e-29!63;CL:0000040!8.20e-29!63;CL:0000559!8.20e-29!63;CL:0002057!1.07e-28!42;CL:0000839!7.64e-28!70;CL:0002009!1.77e-27!65;CL:0000860!5.56e-26!45;CL:0000766!5.35e-24!76;CL:0000557!6.17e-24!71;CL:0000763!5.59e-17!112;CL:0000049!5.59e-17!112;CL:0002031!8.89e-14!124;CL:0002087!4.38e-13!119;CL:0000738!2.43e-10!140;CL:0002032!4.30e-10!165;CL:0000837!4.30e-10!165;CL:0000037!4.40e-09!172;CL:0000566!4.40e-09!172;CL:0000988!3.00e-08!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.25e-89;33!CL:0002057;4.25e-89;33!CL:0000473;1.36e-66;39!CL:0000234;1.36e-66;39!CL:0000576;1.06e-42;48!CL:0000766;3.49e-24;69!CL:0000763;4.16e-12;100!CL:0000764;1.53e-10;2!CL:0000558;1.53e-10;2!CL:0002087;1.65e-09;104!CL:0000738;9.84e-07;136 | |ontology_enrichment_celltype_v019=CL:0000860;4.25e-89;33!CL:0002057;4.25e-89;33!CL:0000473;1.36e-66;39!CL:0000234;1.36e-66;39!CL:0000576;1.06e-42;48!CL:0000766;3.49e-24;69!CL:0000763;4.16e-12;100!CL:0000764;1.53e-10;2!CL:0000558;1.53e-10;2!CL:0002087;1.65e-09;104!CL:0000738;9.84e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.69e-76,42;CL:0002057,3.69e-76,42;CL:0000473,9.82e-71,48;CL:0000234,9.82e-71,48;CL:0000839,1.09e-56,66;CL:0002194,2.93e-55,59;CL:0000576,2.93e-55,59;CL:0000040,2.93e-55,59;CL:0000559,2.93e-55,59;CL:0002009,2.91e-53,61;CL:0000557,5.62e-48,67;CL:0000766,3.10e-44,72;CL:0000763,3.79e-32,108;CL:0000049,3.79e-32,108;CL:0002031,2.89e-28,120;CL:0002087,2.25e-25,115;CL:0000738,1.80e-20,136;CL:0002032,2.42e-19,161;CL:0000837,2.42e-19,161;CL:0000037,2.97e-18,168;CL:0000988,5.58e-17,177;CL:0000764,1.53e-10,2;CL:0000765,1.53e-10,2;CL:0000050,1.53e-10,2;CL:0000038,1.53e-10,2;CL:0000558,1.53e-10,2;CL:0000547,1.53e-10,2;CL:0000549,1.53e-10,2;CL:0000550,1.53e-10,2;CL:0000552,1.53e-10,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.99e-60;42!CL:0000049;3.20e-11;108 | |ontology_enrichment_development_v019=CL:0002057;2.99e-60;42!CL:0000049;3.20e-11;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.06e-26!102;UBERON:0003061!3.06e-26!102;UBERON:0002193!2.81e-22!112;UBERON:0002371!1.17e-19!80;UBERON:0001474!2.47e-18!86;UBERON:0004765!4.49e-17!101;UBERON:0001434!4.49e-17!101;UBERON:0002405!7.95e-15!115;UBERON:0003081!2.47e-11!216;UBERON:0000178!6.16e-09!15;UBERON:0000179!6.16e-09!15;UBERON:0000463!6.16e-09!15;UBERON:0002204!1.90e-07!167 | |ontology_enrichment_uberon=UBERON:0002390!3.06e-26!102;UBERON:0003061!3.06e-26!102;UBERON:0002193!2.81e-22!112;UBERON:0002371!1.17e-19!80;UBERON:0001474!2.47e-18!86;UBERON:0004765!4.49e-17!101;UBERON:0001434!4.49e-17!101;UBERON:0002405!7.95e-15!115;UBERON:0003081!2.47e-11!216;UBERON:0000178!6.16e-09!15;UBERON:0000179!6.16e-09!15;UBERON:0000463!6.16e-09!15;UBERON:0002204!1.90e-07!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.91e-25;15!UBERON:0000179;8.91e-25;15!UBERON:0000463;8.91e-25;15!UBERON:0002390;3.50e-12;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;8.91e-25;15!UBERON:0000179;8.91e-25;15!UBERON:0000463;8.91e-25;15!UBERON:0002390;3.50e-12;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.71e-61,98;UBERON:0003061,1.71e-61,98;UBERON:0002193,4.03e-55,108;UBERON:0002371,1.37e-41,76;UBERON:0001474,4.20e-38,82;UBERON:0002405,2.28e-35,93;UBERON:0004765,3.61e-34,90;UBERON:0001434,3.97e-30,100;UBERON:0003081,2.48e-27,203;UBERON:0000178,8.92e-25,15;UBERON:0000179,8.92e-25,15;UBERON:0000463,8.92e-25,15;UBERON:0002204,1.75e-15,167;UBERON:0000926,1.02e-14,315;UBERON:0004120,1.02e-14,315;UBERON:0006603,1.02e-14,315 | |||
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|short_description=p4@NSUN3 | |short_description=p4@NSUN3 | ||
}} | }} |
Latest revision as of 20:02, 19 September 2015
Short description: | p4@NSUN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NSUN3_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 18bp_to_HQ447621_5end |
EntrezGene: | NSUN3 |
HGNC: | 26208 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.71e-61 | 98 |
blood island | 1.71e-61 | 98 |
hemolymphoid system | 4.03e-55 | 108 |
bone marrow | 1.37e-41 | 76 |
bone element | 4.20e-38 | 82 |
immune system | 2.28e-35 | 93 |
skeletal element | 3.61e-34 | 90 |
skeletal system | 3.97e-30 | 100 |
lateral plate mesoderm | 2.48e-27 | 203 |
blood | 8.92e-25 | 15 |
haemolymphatic fluid | 8.92e-25 | 15 |
organism substance | 8.92e-25 | 15 |
musculoskeletal system | 1.75e-15 | 167 |
mesoderm | 1.02e-14 | 315 |
mesoderm-derived structure | 1.02e-14 | 315 |
presumptive mesoderm | 1.02e-14 | 315 |