FFCP PHASE1:Hg19::chr3:93783330..93783364,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=63899 | |EntrezGene=63899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=26208 | |HGNC=26208 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=51bp_to_HQ447621_5end | |association_with_transcript=51bp_to_HQ447621_5end | ||
|cluster_id=chr3:93783330..93783364,+ | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_3_at_NSUN3_5end | |description=CAGE_peak_3_at_NSUN3_5end | ||
|id=chr3:93783330..93783364,+ | |id=chr3:93783330..93783364,+ | ||
|ontology_enrichment_celltype=CL:0000860;1.40e-74;33!CL:0002057;1.40e-74;33!CL:0000473;6.87e-50;39!CL:0000234;6.87e-50;39!CL:0000576;4.78e-35;48!CL:0000766;2.18e-18;69!CL:0000763;9.47e-10;100!CL:0000764;1.01e-09;2!CL:0000558;1.01e-09;2!CL:0002087;1.63e-08;104 | |ontology_enrichment_celltype=CL:0002057!2.38e-35!42;CL:0000860!3.68e-32!45;CL:0002194!3.14e-23!63;CL:0000576!3.14e-23!63;CL:0000040!3.14e-23!63;CL:0000559!3.14e-23!63;CL:0000839!8.65e-23!70;CL:0002009!3.84e-22!65;CL:0000766!7.23e-21!76;CL:0000557!2.93e-19!71;CL:0000763!2.50e-14!112;CL:0000049!2.50e-14!112;CL:0002087!5.95e-14!119;CL:0000738!2.11e-13!140;CL:0002031!1.62e-12!124;CL:0000037!9.00e-11!172;CL:0000566!9.00e-11!172;CL:0000988!6.23e-10!182;CL:0002032!1.77e-09!165;CL:0000837!1.77e-09!165 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;1.40e-74;33!CL:0002057;1.40e-74;33!CL:0000473;6.87e-50;39!CL:0000234;6.87e-50;39!CL:0000576;4.78e-35;48!CL:0000766;2.18e-18;69!CL:0000763;9.47e-10;100!CL:0000764;1.01e-09;2!CL:0000558;1.01e-09;2!CL:0002087;1.63e-08;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.11e-63,42;CL:0002057,2.11e-63,42;CL:0000473,1.20e-54,48;CL:0000234,1.20e-54,48;CL:0000839,7.27e-44,66;CL:0002194,2.19e-42,59;CL:0000576,2.19e-42,59;CL:0000040,2.19e-42,59;CL:0000559,2.19e-42,59;CL:0002009,8.35e-41,61;CL:0000557,1.28e-36,67;CL:0000766,1.84e-36,72;CL:0000763,3.17e-26,108;CL:0000049,3.17e-26,108;CL:0002031,3.73e-21,120;CL:0002087,9.37e-19,115;CL:0000738,2.79e-16,136;CL:0002032,2.58e-15,161;CL:0000837,2.58e-15,161;CL:0000037,2.17e-14,168;CL:0000988,2.61e-13,177;CL:0000764,1.01e-09,2;CL:0000765,1.01e-09,2;CL:0000050,1.01e-09,2;CL:0000038,1.01e-09,2;CL:0000558,1.01e-09,2;CL:0000547,1.01e-09,2;CL:0000549,1.01e-09,2;CL:0000550,1.01e-09,2;CL:0000552,1.01e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002057;5.24e-48;42!CL:0000049;1.62e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000178;1.90e-22;15!UBERON:0000179;1.90e-22;15!UBERON:0000463;1.90e-22;15!UBERON:0002390;6.56e-11;32 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.01e-25!102;UBERON:0003061!5.01e-25!102;UBERON:0002193!2.96e-22!112;UBERON:0002371!8.78e-16!80;UBERON:0001474!6.80e-14!86;UBERON:0000178!1.92e-13!15;UBERON:0000179!1.92e-13!15;UBERON:0000463!1.92e-13!15;UBERON:0004765!9.65e-12!101;UBERON:0001434!9.65e-12!101;UBERON:0003081!6.00e-11!216;UBERON:0002405!8.40e-11!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.90e-22;15!UBERON:0000179;1.90e-22;15!UBERON:0000463;1.90e-22;15!UBERON:0002390;6.56e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.12e-48,98;UBERON:0003061,1.12e-48,98;UBERON:0002193,1.97e-43,108;UBERON:0002371,1.45e-31,76;UBERON:0001474,8.31e-29,82;UBERON:0002405,1.05e-26,93;UBERON:0004765,1.07e-25,90;UBERON:0001434,1.67e-22,100;UBERON:0000178,1.91e-22,15;UBERON:0000179,1.91e-22,15;UBERON:0000463,1.91e-22,15;UBERON:0003081,5.66e-22,203;UBERON:0000926,8.84e-14,315;UBERON:0004120,8.84e-14,315;UBERON:0006603,8.84e-14,315;UBERON:0002204,4.97e-12,167 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.563817616383885,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0.223915474239924,0,0,1.89017710413434,1.88937971844405,0.485168122375632,2.78914844286822,5.34518254428373,4.95530193432166,2.8769239232215,4.09857130446561,4.96612682766029,0.689491361473237,1.29096936716765,1.35426486594342,2.25890807451126,4.91231070104122,4.94391665779186,2.75475503133812,3.20929027076094,0.639337125799041,4.61791820261403,3.39088217956774,2.55734850319616,4.35313857942876,5.10646702222026,3.73693349397345,3.76872997885115,4.17186334736161,4.12658804939722,2.42159801053347,8.47038562771399,3.16462387440884,0,0,0,0.673971786878971,0,0.48217676009124,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0.318565414324097,0,0.950452044448374,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.926864265692532,0.286836620748814,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0.871533458600294,0.899756920638513,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0.460385919864187,0,1.15325234330131,1.53512174720011,0,1.48418066444991,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.0756092681963,16.2089979635438,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21856744815642,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,62.4160559355568,52.7599672928239,109.941907124613,27.6348859531035,25.0930986582578,42.7992385387193,50.2229236631447,86.4506442160755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0,33.5276329285716,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0.869767748958028,0,0,0,0.305994652908965,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.314727528809989,0.105600336519406,12.729401092632,0,0,0,0,0,2.5926644736038,0,0,0.082092520749339,0,0,0,0,0,0,0.171086837884329,0,0.213574825135389,1.25763444079733,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0.467426619694449,0,0,0,0,3.43260102595385,0.302461847526478,0.310874401165561,0,0,0,0.155262956876259,0.414706207840855,0.53168342911599,0,0,0,0,0.727394636810238,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0.132864840313363,0,0,12.0428725289322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0,0,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,1.03132620757723,0,0.178553938605658,0,0,0,0,0,0,0,0.436350690340377,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0.665756774185513,0,0 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| ||
|short_description=p3@NSUN3 | |short_description=p3@NSUN3 | ||
}} | }} |
Latest revision as of 20:03, 19 September 2015
Short description: | p3@NSUN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NSUN3_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 51bp_to_HQ447621_5end |
EntrezGene: | NSUN3 |
HGNC: | 26208 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.12e-48 | 98 |
blood island | 1.12e-48 | 98 |
hemolymphoid system | 1.97e-43 | 108 |
bone marrow | 1.45e-31 | 76 |
bone element | 8.31e-29 | 82 |
immune system | 1.05e-26 | 93 |
skeletal element | 1.07e-25 | 90 |
skeletal system | 1.67e-22 | 100 |
blood | 1.91e-22 | 15 |
haemolymphatic fluid | 1.91e-22 | 15 |
organism substance | 1.91e-22 | 15 |
lateral plate mesoderm | 5.66e-22 | 203 |
mesoderm | 8.84e-14 | 315 |
mesoderm-derived structure | 8.84e-14 | 315 |
presumptive mesoderm | 8.84e-14 | 315 |
musculoskeletal system | 4.97e-12 | 167 |