FFCP PHASE1:Hg19::chr19:54377068..54377094,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91663 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7544 | |||
|TSSclassifier=strong | |||
|UniProt=Q96S97 | |||
|association_with_transcript=72bp_to_AK027693_5end | |||
|cluster_id=chr19:54377068..54377094,+ | |||
|coexpression_cluster_id=C482 | |||
|description=CAGE_peak_6_at_MYADM_5end | |||
|id=chr19:54377068..54377094,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.41e-15!42;CL:0000860!6.49e-13!45;CL:0000766!1.47e-11!76;CL:0000048!5.75e-11!430;CL:0000723!4.81e-10!436;CL:0000557!7.37e-10!71;CL:0000034!1.81e-09!444;CL:0000839!9.46e-09!70;CL:0002009!3.10e-08!65;CL:0000134!8.78e-08!358;CL:0002194!1.07e-07!63;CL:0000576!1.07e-07!63;CL:0000040!1.07e-07!63;CL:0000559!1.07e-07!63;CL:0002320!1.48e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.86e-22;33!CL:0002057;1.86e-22;33!CL:0000473;1.87e-16;39!CL:0000234;1.87e-16;39!CL:0000766;4.34e-10;69!CL:0000576;4.80e-10;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.99e-19,42;CL:0002057,1.99e-19,42;CL:0000473,1.06e-17,48;CL:0000234,1.06e-17,48;CL:0000766,1.23e-17,72;CL:0000557,2.52e-15,67;CL:0000839,4.77e-14,66;CL:0000048,7.21e-14,427;CL:0000723,3.83e-13,433;CL:0002009,8.46e-13,61;CL:0000034,2.77e-12,441;CL:0002194,4.58e-12,59;CL:0000576,4.58e-12,59;CL:0000040,4.58e-12,59;CL:0000559,4.58e-12,59;CL:0000134,1.50e-10,354;CL:0002320,5.52e-10,361;CL:0000763,1.11e-08,108;CL:0000049,1.11e-08,108;CL:0000219,6.06e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.73e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.06e-10!216;UBERON:0000926!2.49e-09!448;UBERON:0004120!2.49e-09!448;UBERON:0006603!2.49e-09!448;UBERON:0002204!2.19e-08!167;UBERON:0002384!2.94e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.08e-22,315;UBERON:0004120,1.08e-22,315;UBERON:0006603,1.08e-22,315;UBERON:0003081,3.00e-16,203;UBERON:0002371,1.04e-11,76;UBERON:0002204,1.85e-10,167;UBERON:0001474,3.14e-10,82;UBERON:0002390,6.62e-10,98;UBERON:0003061,6.62e-10,98;UBERON:0002384,1.05e-09,371;UBERON:0002193,2.07e-08,108;UBERON:0002405,2.22e-08,93;UBERON:0004765,3.59e-08,90;UBERON:0001434,1.50e-07,100 | |||
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| |||
|short_description=p6@MYADM | |||
}} |
Latest revision as of 20:11, 19 September 2015
Short description: | p6@MYADM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MYADM_5end |
Coexpression cluster: | C482_CD14_Mast_Fibroblast_Smooth_Neutrophils_Basophils_Mesenchymal |
Association with transcript: | 72bp_to_AK027693_5end |
EntrezGene: | MYADM |
HGNC: | 7544 |
UniProt: | Q96S97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.99e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.99e-19 | 42 |
defensive cell | 1.06e-17 | 48 |
phagocyte | 1.06e-17 | 48 |
myeloid leukocyte | 1.23e-17 | 72 |
granulocyte monocyte progenitor cell | 2.52e-15 | 67 |
myeloid lineage restricted progenitor cell | 4.77e-14 | 66 |
multi fate stem cell | 7.21e-14 | 427 |
somatic stem cell | 3.83e-13 | 433 |
macrophage dendritic cell progenitor | 8.46e-13 | 61 |
stem cell | 2.77e-12 | 441 |
monopoietic cell | 4.58e-12 | 59 |
monocyte | 4.58e-12 | 59 |
monoblast | 4.58e-12 | 59 |
promonocyte | 4.58e-12 | 59 |
mesenchymal cell | 1.50e-10 | 354 |
connective tissue cell | 5.52e-10 | 361 |
myeloid cell | 1.11e-08 | 108 |
common myeloid progenitor | 1.11e-08 | 108 |
motile cell | 6.06e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.08e-22 | 315 |
mesoderm-derived structure | 1.08e-22 | 315 |
presumptive mesoderm | 1.08e-22 | 315 |
lateral plate mesoderm | 3.00e-16 | 203 |
bone marrow | 1.04e-11 | 76 |
musculoskeletal system | 1.85e-10 | 167 |
bone element | 3.14e-10 | 82 |
hematopoietic system | 6.62e-10 | 98 |
blood island | 6.62e-10 | 98 |
connective tissue | 1.05e-09 | 371 |
hemolymphoid system | 2.07e-08 | 108 |
immune system | 2.22e-08 | 93 |
skeletal element | 3.59e-08 | 90 |
skeletal system | 1.50e-07 | 100 |