FFCP PHASE1:Hg19::chr3:119298575..119298644,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:119298575..119298644,+ to FFCP PHASE1:Hg19::chr3:119298575..119298644,+: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=141 | |EntrezGene=141 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=269 | |HGNC=269 | ||
|TSSclassifier=strong | |||
|UniProt=P54922 | |UniProt=P54922 | ||
|association_with_transcript=52bp_to_ENST00000357003,NM_001125,uc003ecs.2,uc010hqv.2,uc011bjb.1_5end | |||
|cluster_id=chr3:119298575..119298644,+ | |||
|description=CAGE_peak_1_at_ADPRH_5end | |||
|id=chr3:119298575..119298644,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.68e-33!140;CL:0000557!9.09e-31!71;CL:0002031!4.60e-30!124;CL:0000839!2.99e-29!70;CL:0002087!5.11e-29!119;CL:0000766!6.38e-28!76;CL:0002009!6.05e-27!65;CL:0002194!8.47e-27!63;CL:0000576!8.47e-27!63;CL:0000040!8.47e-27!63;CL:0000559!8.47e-27!63;CL:0000988!1.88e-26!182;CL:0000037!3.46e-26!172;CL:0000566!3.46e-26!172;CL:0002032!3.12e-24!165;CL:0000837!3.12e-24!165;CL:0002057!4.78e-24!42;CL:0000860!3.19e-20!45;CL:0000763!7.14e-20!112;CL:0000049!7.14e-20!112;CL:0000134!4.57e-10!358;CL:0002320!2.17e-09!365;CL:0000945!2.25e-09!24;CL:0000826!2.25e-09!24;CL:0000219!6.13e-08!390;CL:0000236!1.97e-07!14;CL:0000048!7.68e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.67e-22;39!CL:0000234;4.67e-22;39!CL:0000860;7.97e-22;33!CL:0002057;7.97e-22;33!CL:0000576;1.62e-20;48!CL:0000766;8.84e-17;69!CL:0000945;1.94e-12;24!CL:0002087;1.50e-11;104!CL:0000738;2.42e-11;136!CL:0000763;1.43e-08;100!CL:0000236;1.86e-08;13!CL:0000451;8.68e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.14e-46,136;CL:0000557,9.32e-43,67;CL:0000839,1.22e-40,66;CL:0002031,3.16e-40,120;CL:0000766,5.36e-40,72;CL:0002087,5.21e-39,115;CL:0000037,1.43e-38,168;CL:0000988,6.95e-38,177;CL:0002009,7.70e-38,61;CL:0002194,9.45e-38,59;CL:0000576,9.45e-38,59;CL:0000040,9.45e-38,59;CL:0000559,9.45e-38,59;CL:0002032,1.10e-35,161;CL:0000837,1.10e-35,161;CL:0000473,4.80e-34,48;CL:0000234,4.80e-34,48;CL:0000763,9.40e-31,108;CL:0000049,9.40e-31,108;CL:0000860,1.34e-29,42;CL:0002057,1.34e-29,42;CL:0000945,1.69e-12,24;CL:0000826,1.69e-12,24;CL:0000134,5.41e-11,354;CL:0002320,6.75e-10,361;CL:0000236,2.51e-09,14;CL:0000219,6.34e-09,386;CL:0000451,7.02e-08,10;CL:0002393,4.29e-07,9;CL:0002397,4.29e-07,9;CL:0000048,9.10e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;2.46e-21;42!CL:0000049;1.32e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.52e-37!112;UBERON:0002390!5.94e-34!102;UBERON:0003061!5.94e-34!102;UBERON:0002371!4.58e-27!80;UBERON:0002405!4.28e-24!115;UBERON:0003081!1.12e-23!216;UBERON:0001474!5.67e-22!86;UBERON:0004765!1.61e-17!101;UBERON:0001434!1.61e-17!101;UBERON:0007023!3.57e-10!115;UBERON:0002204!1.35e-09!167;UBERON:0002384!1.40e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.53e-07;15!UBERON:0000179;1.53e-07;15!UBERON:0000463;1.53e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.51e-49,108;UBERON:0002390,1.46e-45,98;UBERON:0003061,1.46e-45,98;UBERON:0002405,1.75e-41,93;UBERON:0002371,5.66e-37,76;UBERON:0001474,7.31e-32,82;UBERON:0003081,1.10e-28,203;UBERON:0004765,3.24e-26,90;UBERON:0001434,4.22e-22,100;UBERON:0000926,1.83e-12,315;UBERON:0004120,1.83e-12,315;UBERON:0006603,1.83e-12,315;UBERON:0002204,1.00e-09,167;UBERON:0002384,7.31e-09,371;UBERON:0000178,6.23e-08,15;UBERON:0000179,6.23e-08,15;UBERON:0000463,6.23e-08,15;UBERON:0007023,1.93e-07,114 | |||
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| ||
|short_description=p1@ADPRH | |||
}} | }} |
Latest revision as of 20:33, 19 September 2015
Short description: | p1@ADPRH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADPRH_5end |
Coexpression cluster: | NA |
Association with transcript: | 52bp_to_ENST00000357003, NM_001125, uc003ecs.2, uc010hqv.2, uc011bjb.1_5end |
EntrezGene: | ADPRH |
HGNC: | 269 |
UniProt: | P54922 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.51e-49 | 108 |
hematopoietic system | 1.46e-45 | 98 |
blood island | 1.46e-45 | 98 |
immune system | 1.75e-41 | 93 |
bone marrow | 5.66e-37 | 76 |
bone element | 7.31e-32 | 82 |
lateral plate mesoderm | 1.10e-28 | 203 |
skeletal element | 3.24e-26 | 90 |
skeletal system | 4.22e-22 | 100 |
mesoderm | 1.83e-12 | 315 |
mesoderm-derived structure | 1.83e-12 | 315 |
presumptive mesoderm | 1.83e-12 | 315 |
musculoskeletal system | 1.00e-09 | 167 |
connective tissue | 7.31e-09 | 371 |
blood | 6.23e-08 | 15 |
haemolymphatic fluid | 6.23e-08 | 15 |
organism substance | 6.23e-08 | 15 |
adult organism | 1.93e-07 | 114 |