FFCP PHASE1:Hg19::chr10:90749936..90749994,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:90749936..90749994,+
|short_description=p5@FAS
|description=CAGE_peak_5_at_FAS_5end
|association_with_transcript=-293bp_to_NM_000043,NM_152871,NM_152872,N...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=355 | |EntrezGene=355 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11920 | |HGNC=11920 | ||
|UniProt=P25445, | |TSSclassifier=strong | ||
|UniProt=P25445,Q5T9P3 | |||
|association_with_transcript=-293bp_to_NM_000043,NM_152871,NM_152872,NR_028033,NR_028034,NR_028035,NR_028036,uc001kfr.2,uc001kfs.2,uc001kft.2,uc001kfw.2,uc010qnb.1,uc010qnc.1,uc010qnd.1,uc010qne.1_5end | |||
|cluster_id=chr10:90749936..90749994,+ | |||
|coexpression_cluster_id=C152 | |||
|description=CAGE_peak_5_at_FAS_5end | |||
|id=chr10:90749936..90749994,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.07e-16!42;CL:0000860!2.75e-15!45;CL:0000048!1.12e-12!430;CL:0000723!1.55e-11!436;CL:0000034!1.33e-10!444;CL:0000134!4.20e-10!358;CL:0002320!9.36e-10!365;CL:0002194!2.28e-08!63;CL:0000576!2.28e-08!63;CL:0000040!2.28e-08!63;CL:0000559!2.28e-08!63;CL:0000219!9.20e-08!390;CL:0000057!1.10e-07!75;CL:0002009!1.29e-07!65;CL:0000136!1.39e-07!15;CL:0000766!7.02e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.60e-12;33!CL:0002057;1.60e-12;33!CL:0000473;1.04e-08;39!CL:0000234;1.04e-08;39!CL:0000136;1.75e-08;13!CL:0000576;2.36e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.32e-17,42;CL:0002057,8.32e-17,42;CL:0000473,1.69e-13,48;CL:0000234,1.69e-13,48;CL:0000048,4.98e-11,427;CL:0000134,1.15e-10,354;CL:0000723,1.97e-10,433;CL:0002320,6.29e-10,361;CL:0000136,6.62e-10,15;CL:0002194,8.65e-10,59;CL:0000576,8.65e-10,59;CL:0000040,8.65e-10,59;CL:0000559,8.65e-10,59;CL:0000034,1.14e-09,441;CL:0000766,3.41e-09,72;CL:0002009,3.43e-09,61;CL:0000219,1.30e-08,386;CL:0000557,2.90e-08,67;CL:0000839,7.13e-08,66 | |||
|ontology_enrichment_development_v019=CL:0002057;1.10e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.10e-10!375;UBERON:0002204!2.08e-09!167;UBERON:0000479!3.17e-07!787;UBERON:0002371!5.80e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;8.54e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,6.65e-10,315;UBERON:0004120,6.65e-10,315;UBERON:0006603,6.65e-10,315;UBERON:0002384,2.19e-09,371;UBERON:0002371,4.96e-09,76;UBERON:0002405,8.96e-09,93;UBERON:0001474,1.09e-07,82;UBERON:0002390,1.09e-07,98;UBERON:0003061,1.09e-07,98;UBERON:0002193,3.18e-07,108;UBERON:0004457,3.43e-07,12;UBERON:0000042,3.43e-07,12 | |||
|phase1_expression=1.81678379270557,1.07050261945492,2.81908808191942,3.00219895059391,1.78784437770915,2.61701557230111,5.06599756336621,1.26343974685366,1.30592814099919,0,0,0,0,0.618831764800233,0.994192127183747,0,0.602694528023977,0,0.487932798790507,0,0,0.313454721478088,0,0,0.125542639594803,0,0.164201178899891,0,2.36018566109342,1.15148819429164,2.01260960310899,0,0.30120591877825,0,0,0,2.64240395401362,2.21598163412751,1.80490002723128,6.51032612147556,0,0,0,0.290796477559129,0.755751887377619,0.970336244751265,0.697287110717054,0,2.47765096716083,3.45230870786581,3.07392847834921,4.49316236788312,1.72372840368309,1.93645405075148,4.06279459783025,0.752969358170419,0,0.449446968890169,3.97909060082173,0.962787081228281,5.75403413219137,1.9791078011203,2.59302754908121,4.26224750532694,2.32167390902867,1.13477044938228,1.86846674698672,2.51248665256743,1.5644487552606,5.64690996233303,4.84319602106695,0.368277635987565,4.1140110367315,0.845021145247767,0.637812899895131,1.67726916406701,1.79725809834392,1.65194582125657,1.6072558669708,1.14005097496499,0.59675003159727,2.19196984517561,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0,0.520237390239513,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,1.20964045934839,0.534880391567015,0.289648807765598,4.87613732627923,2.01210257911091,1.15076305659177,0.722878304769133,0,0.579386075843295,0,0,0.0945348171640679,0,0.087834785693126,1.11332214173056,0,0,0,0.522389211897802,0.132957960518865,0,0,0,0,0.860234595106124,0.347140501607594,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.886413581652058,0.132409180813219,0.286836620748814,0.354668382198357,1.68203280042692,1.06748995729705,0.24666754841716,1.55605517699883,1.34710672069688,0.817309515567294,1.51357427644931,0.576175924479999,0.468642863667593,0.312160076830321,0,1.04614076386261,0.117434498643765,0,0,0,0,0.826606249406124,0,1.7308685049499,4.55080680969013,0.718618141816238,0,0,0.554128230968366,0.438977620880838,0,4.8076178850111,0.680593098960126,1.79389635688862,2.56268866582281,2.54318281391474,1.80054657650641,1.33968288009971,0.772921620136887,1.48893485065272,0.506328996723799,0.194874010322397,0.757301322732344,1.56484827691909,2.26304479546337,1.77504796258307,0.302256294682921,0.67824236924195,0,0,0.286804595389004,0,0,0,0.10366105501537,0,0,1.56449532329816,1.28648187638577,0,1.39310378409594,0.721879481669586,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0.514703430895577,0,0,0,0,0,2.07986957055916,0,0.115930404975077,0.587043471179108,0,0,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0,0,0.288239906833923,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0.22001485746285,0.387815147273333,3.57656445851882,0.845302752556,1.06375246633948,0,0.257207374262142,0,0,1.85871391755592,2.71310802695722,2.46972101034231,0.65147236858747,1.06617584622764,0.791951872933429,0.301439377059586,1.74306691720059,0.499864955910285,0,0,0,0,1.14861935834114,0,0.144781306667579,1.2328579353023,0,0,1.37921532141349,0.862510299438069,1.02674429023799,0.254094624222463,0,0,0,0,0,0,1.24324654030811,0.24538298343828,0,0,0,0.356857977594324,0.157702415033935,0.585707074963566,0.300946099727719,2.27407504055985,0,0.664225598535437,0.553107505625109,1.39013783148933,0,0,0,1.72571360654893,0.74709290462411,0,0,0,1.24053903909388,1.38115775959256,1.12264037773229,0.896974044789907,2.55853624533352,2.0911009748669,0,0.771048469013278,3.01854933032316,2.79232330446951,3.63478100428535,1.16210378459959,0,0,0.0920809889358963,0.34444334449382,0.182091168006717,1.44236856455367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.854738209659,0,0,0,0,1.6068392984416,1.16004861950546,0.308097234229289,1.68854042198743,0.413509717453592,2.57808587683857,1.0151168573996,0.255679882248303,0.712256285173899,0.165284915360978,0,0.510450849978337,0.10115778085555,0,0.31481234683064,0.6970372701606,1.54016790088044,0,0,0.37064843820784,0.429374660225974,0.744316738719335,0.316379424718726,0.38126038784765,0,0,0.318203247925937,0,1.61885211824983,1.64722217841633,2.23843564456804,0.404364963146632,0,0,0.48763373908959,1.21856744815642,2.11300293513511,0.818999468447914,1.41405431953713,2.26016233240486,1.10273068709225,0,0.438450885253763,0,3.27947376023316,0,0.6196469961995,0.281695602532241,0.717056761020258,0.785992328104969,0,0.354761064070598,1.89996871767898,4.61012850143863,0,0.349934720244983,0,1.34060455107157,0,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798317485731266,0.191505370132367,0,0,0.561594356226918,0,0.156679895773023,0,0,0,0,0,0.687010689511529,0,0,0,1.17232857241224,0,0,0,0.33307196799782,0,0,0.879049075631364,0,0.334330152832435,0,0,0,0,1.9882952955326,0.281338832821026,0.111308705022906,0.329607748453519,0,0.796991953004279,0.276283915531148,0,0,0.984678443688556,0.933118762985422,0,0,0,2.86065876347107,0,2.2227398028927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| |phase1_expression=1.81678379270557,1.07050261945492,2.81908808191942,3.00219895059391,1.78784437770915,2.61701557230111,5.06599756336621,1.26343974685366,1.30592814099919,0,0,0,0,0.618831764800233,0.994192127183747,0,0.602694528023977,0,0.487932798790507,0,0,0.313454721478088,0,0,0.125542639594803,0,0.164201178899891,0,2.36018566109342,1.15148819429164,2.01260960310899,0,0.30120591877825,0,0,0,2.64240395401362,2.21598163412751,1.80490002723128,6.51032612147556,0,0,0,0.290796477559129,0.755751887377619,0.970336244751265,0.697287110717054,0,2.47765096716083,3.45230870786581,3.07392847834921,4.49316236788312,1.72372840368309,1.93645405075148,4.06279459783025,0.752969358170419,0,0.449446968890169,3.97909060082173,0.962787081228281,5.75403413219137,1.9791078011203,2.59302754908121,4.26224750532694,2.32167390902867,1.13477044938228,1.86846674698672,2.51248665256743,1.5644487552606,5.64690996233303,4.84319602106695,0.368277635987565,4.1140110367315,0.845021145247767,0.637812899895131,1.67726916406701,1.79725809834392,1.65194582125657,1.6072558669708,1.14005097496499,0.59675003159727,2.19196984517561,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0,0.520237390239513,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,1.20964045934839,0.534880391567015,0.289648807765598,4.87613732627923,2.01210257911091,1.15076305659177,0.722878304769133,0,0.579386075843295,0,0,0.0945348171640679,0,0.087834785693126,1.11332214173056,0,0,0,0.522389211897802,0.132957960518865,0,0,0,0,0.860234595106124,0.347140501607594,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.886413581652058,0.132409180813219,0.286836620748814,0.354668382198357,1.68203280042692,1.06748995729705,0.24666754841716,1.55605517699883,1.34710672069688,0.817309515567294,1.51357427644931,0.576175924479999,0.468642863667593,0.312160076830321,0,1.04614076386261,0.117434498643765,0,0,0,0,0.826606249406124,0,1.7308685049499,4.55080680969013,0.718618141816238,0,0,0.554128230968366,0.438977620880838,0,4.8076178850111,0.680593098960126,1.79389635688862,2.56268866582281,2.54318281391474,1.80054657650641,1.33968288009971,0.772921620136887,1.48893485065272,0.506328996723799,0.194874010322397,0.757301322732344,1.56484827691909,2.26304479546337,1.77504796258307,0.302256294682921,0.67824236924195,0,0,0.286804595389004,0,0,0,0.10366105501537,0,0,1.56449532329816,1.28648187638577,0,1.39310378409594,0.721879481669586,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0.514703430895577,0,0,0,0,0,2.07986957055916,0,0.115930404975077,0.587043471179108,0,0,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0,0,0.288239906833923,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0.22001485746285,0.387815147273333,3.57656445851882,0.845302752556,1.06375246633948,0,0.257207374262142,0,0,1.85871391755592,2.71310802695722,2.46972101034231,0.65147236858747,1.06617584622764,0.791951872933429,0.301439377059586,1.74306691720059,0.499864955910285,0,0,0,0,1.14861935834114,0,0.144781306667579,1.2328579353023,0,0,1.37921532141349,0.862510299438069,1.02674429023799,0.254094624222463,0,0,0,0,0,0,1.24324654030811,0.24538298343828,0,0,0,0.356857977594324,0.157702415033935,0.585707074963566,0.300946099727719,2.27407504055985,0,0.664225598535437,0.553107505625109,1.39013783148933,0,0,0,1.72571360654893,0.74709290462411,0,0,0,1.24053903909388,1.38115775959256,1.12264037773229,0.896974044789907,2.55853624533352,2.0911009748669,0,0.771048469013278,3.01854933032316,2.79232330446951,3.63478100428535,1.16210378459959,0,0,0.0920809889358963,0.34444334449382,0.182091168006717,1.44236856455367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.854738209659,0,0,0,0,1.6068392984416,1.16004861950546,0.308097234229289,1.68854042198743,0.413509717453592,2.57808587683857,1.0151168573996,0.255679882248303,0.712256285173899,0.165284915360978,0,0.510450849978337,0.10115778085555,0,0.31481234683064,0.6970372701606,1.54016790088044,0,0,0.37064843820784,0.429374660225974,0.744316738719335,0.316379424718726,0.38126038784765,0,0,0.318203247925937,0,1.61885211824983,1.64722217841633,2.23843564456804,0.404364963146632,0,0,0.48763373908959,1.21856744815642,2.11300293513511,0.818999468447914,1.41405431953713,2.26016233240486,1.10273068709225,0,0.438450885253763,0,3.27947376023316,0,0.6196469961995,0.281695602532241,0.717056761020258,0.785992328104969,0,0.354761064070598,1.89996871767898,4.61012850143863,0,0.349934720244983,0,1.34060455107157,0,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798317485731266,0.191505370132367,0,0,0.561594356226918,0,0.156679895773023,0,0,0,0,0,0.687010689511529,0,0,0,1.17232857241224,0,0,0,0.33307196799782,0,0,0.879049075631364,0,0.334330152832435,0,0,0,0,1.9882952955326,0.281338832821026,0.111308705022906,0.329607748453519,0,0.796991953004279,0.276283915531148,0,0,0.984678443688556,0.933118762985422,0,0,0,2.86065876347107,0,2.2227398028927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| ||
|short_description=p5@FAS | |||
}} | }} |
Latest revision as of 20:40, 19 September 2015
Short description: | p5@FAS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FAS_5end |
Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
Association with transcript: | -293bp_to_NM_000043, NM_152871, NM_152872, NR_028033, NR_028034, NR_028035, NR_028036, uc001kfr.2, uc001kfs.2, uc001kft.2, uc001kfw.2, uc010qnb.1, uc010qnc.1, uc010qnd.1, uc010qne.1_5end |
EntrezGene: | FAS |
HGNC: | 11920 |
UniProt: | P25445Q5T9P3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.32e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.32e-17 | 42 |
defensive cell | 1.69e-13 | 48 |
phagocyte | 1.69e-13 | 48 |
multi fate stem cell | 4.98e-11 | 427 |
mesenchymal cell | 1.15e-10 | 354 |
somatic stem cell | 1.97e-10 | 433 |
connective tissue cell | 6.29e-10 | 361 |
fat cell | 6.62e-10 | 15 |
monopoietic cell | 8.65e-10 | 59 |
monocyte | 8.65e-10 | 59 |
monoblast | 8.65e-10 | 59 |
promonocyte | 8.65e-10 | 59 |
stem cell | 1.14e-09 | 441 |
myeloid leukocyte | 3.41e-09 | 72 |
macrophage dendritic cell progenitor | 3.43e-09 | 61 |
motile cell | 1.30e-08 | 386 |
granulocyte monocyte progenitor cell | 2.90e-08 | 67 |
myeloid lineage restricted progenitor cell | 7.13e-08 | 66 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 6.65e-10 | 315 |
mesoderm-derived structure | 6.65e-10 | 315 |
presumptive mesoderm | 6.65e-10 | 315 |
connective tissue | 2.19e-09 | 371 |
bone marrow | 4.96e-09 | 76 |
immune system | 8.96e-09 | 93 |
bone element | 1.09e-07 | 82 |
hematopoietic system | 1.09e-07 | 98 |
blood island | 1.09e-07 | 98 |
hemolymphoid system | 3.18e-07 | 108 |
cavity lining | 3.43e-07 | 12 |
serous membrane | 3.43e-07 | 12 |