FFCP PHASE1:Hg19::chr6:76311970..76311977,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:76311970..76311977,+
|short_description=p14@SENP6
|description=CAGE_peak_14_at_SENP6_5end
|association_with_transcript=30bp_to_ENST00000493959_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26054 | |EntrezGene=26054 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20944 | |HGNC=20944 | ||
|TSSclassifier=strong | |||
|UniProt=D6RJH1 | |UniProt=D6RJH1 | ||
|association_with_transcript=30bp_to_ENST00000493959_5end | |||
|cluster_id=chr6:76311970..76311977,+ | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_14_at_SENP6_5end | |||
|id=chr6:76311970..76311977,+ | |||
|ontology_enrichment_celltype=CL:0000557!3.24e-26!71;CL:0002057!2.66e-25!42;CL:0000839!3.42e-25!70;CL:0000860!4.62e-24!45;CL:0000766!3.88e-23!76;CL:0002009!1.29e-22!65;CL:0002194!6.19e-21!63;CL:0000576!6.19e-21!63;CL:0000040!6.19e-21!63;CL:0000559!6.19e-21!63;CL:0000763!2.40e-16!112;CL:0000049!2.40e-16!112;CL:0002031!1.91e-15!124;CL:0000738!4.27e-15!140;CL:0002087!2.74e-12!119;CL:0000037!8.18e-12!172;CL:0000566!8.18e-12!172;CL:0002032!2.54e-11!165;CL:0000837!2.54e-11!165;CL:0000988!2.65e-11!182 | |||
|ontology_enrichment_celltype_v019=CL:0000840;3.34e-34;5!CL:0000990;6.15e-23;8!CL:0000860;4.97e-22;33!CL:0002057;4.97e-22;33!CL:0000451;7.86e-19;10!CL:0000473;1.64e-14;39!CL:0000234;1.64e-14;39!CL:0000576;8.28e-14;48!CL:0000766;2.55e-09;69!CL:0001014;1.23e-07;2!CL:0001016;1.23e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,3.80e-34,5;CL:0001029,3.80e-34,5;CL:0000557,2.50e-29,67;CL:0002009,2.26e-27,61;CL:0000839,2.96e-25,66;CL:0002194,1.06e-23,59;CL:0000576,1.06e-23,59;CL:0000040,1.06e-23,59;CL:0000559,1.06e-23,59;CL:0000766,4.57e-23,72;CL:0000990,6.69e-23,8;CL:0000451,8.43e-19,10;CL:0000860,5.95e-18,42;CL:0002057,5.95e-18,42;CL:0000763,1.00e-17,108;CL:0000049,1.00e-17,108;CL:0002031,8.23e-16,120;CL:0000473,1.29e-15,48;CL:0000234,1.29e-15,48;CL:0000738,8.92e-14,136;CL:0002087,1.29e-11,115;CL:0002032,2.15e-11,161;CL:0000837,2.15e-11,161;CL:0000037,7.47e-11,168;CL:0000988,3.22e-10,177;CL:0001014,1.36e-07,2;CL:0001016,1.36e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.71e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.04e-22!80;UBERON:0002390!2.55e-22!102;UBERON:0003061!2.55e-22!102;UBERON:0002193!2.35e-21!112;UBERON:0001474!5.74e-20!86;UBERON:0002405!2.41e-18!115;UBERON:0004765!1.93e-17!101;UBERON:0001434!1.93e-17!101;UBERON:0003081!1.03e-08!216;UBERON:0007023!6.34e-08!115;UBERON:0002204!7.75e-08!167;UBERON:0002619!8.58e-08!22;UBERON:0001893!1.73e-07!34;UBERON:0002020!1.74e-07!34;UBERON:0003528!1.74e-07!34;UBERON:0000062!1.85e-07!511;UBERON:0001950!1.88e-07!20;UBERON:0001869!2.14e-07!32;UBERON:0002791!4.93e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.25e-13;1!UBERON:0006518;1.25e-13;1!UBERON:0008949;1.25e-13;1!UBERON:0000101;1.25e-13;1!UBERON:0002167;1.25e-13;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.96e-26,76;UBERON:0001474,9.25e-24,82;UBERON:0004765,1.54e-21,90;UBERON:0002405,8.39e-21,93;UBERON:0002390,1.13e-19,98;UBERON:0003061,1.13e-19,98;UBERON:0001434,2.97e-19,100;UBERON:0002193,1.00e-17,108;UBERON:0002171,1.42e-13,1;UBERON:0006518,1.42e-13,1;UBERON:0008949,1.42e-13,1;UBERON:0000101,1.42e-13,1;UBERON:0002167,1.42e-13,1;UBERON:0002204,6.29e-11,167;UBERON:0003081,1.07e-08,203 | |||
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| ||
|short_description=p14@SENP6 | |||
}} | }} |
Latest revision as of 21:11, 19 September 2015
Short description: | p14@SENP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SENP6_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 30bp_to_ENST00000493959_5end |
EntrezGene: | SENP6 |
HGNC: | 20944 |
UniProt: | D6RJH1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 3.80e-34 | 5 |
common dendritic progenitor | 3.80e-34 | 5 |
granulocyte monocyte progenitor cell | 2.50e-29 | 67 |
macrophage dendritic cell progenitor | 2.26e-27 | 61 |
myeloid lineage restricted progenitor cell | 2.96e-25 | 66 |
monopoietic cell | 1.06e-23 | 59 |
monocyte | 1.06e-23 | 59 |
monoblast | 1.06e-23 | 59 |
promonocyte | 1.06e-23 | 59 |
myeloid leukocyte | 4.57e-23 | 72 |
conventional dendritic cell | 6.69e-23 | 8 |
dendritic cell | 8.43e-19 | 10 |
classical monocyte | 5.95e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.95e-18 | 42 |
myeloid cell | 1.00e-17 | 108 |
common myeloid progenitor | 1.00e-17 | 108 |
hematopoietic lineage restricted progenitor cell | 8.23e-16 | 120 |
defensive cell | 1.29e-15 | 48 |
phagocyte | 1.29e-15 | 48 |
leukocyte | 8.92e-14 | 136 |
nongranular leukocyte | 1.29e-11 | 115 |
hematopoietic oligopotent progenitor cell | 2.15e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.15e-11 | 161 |
hematopoietic stem cell | 7.47e-11 | 168 |
hematopoietic cell | 3.22e-10 | 177 |
CD1a-positive Langerhans cell | 1.36e-07 | 2 |
immature CD1a-positive Langerhans cell | 1.36e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.96e-26 | 76 |
bone element | 9.25e-24 | 82 |
skeletal element | 1.54e-21 | 90 |
immune system | 8.39e-21 | 93 |
hematopoietic system | 1.13e-19 | 98 |
blood island | 1.13e-19 | 98 |
skeletal system | 2.97e-19 | 100 |
hemolymphoid system | 1.00e-17 | 108 |
lower lobe of right lung | 1.42e-13 | 1 |
right lung lobe | 1.42e-13 | 1 |
lower lobe of lung | 1.42e-13 | 1 |
lobe of lung | 1.42e-13 | 1 |
right lung | 1.42e-13 | 1 |
musculoskeletal system | 6.29e-11 | 167 |
lateral plate mesoderm | 1.07e-08 | 203 |