FFCP PHASE1:Hg19::chr12:65004292..65004306,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:65004292..65004306,+ to FFCP PHASE1:Hg19::chr12:65004292..65004306,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=283349 | |EntrezGene=283349 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14271 | |HGNC=14271 | ||
|TSSclassifier=strong | |||
|UniProt=Q86WH2,Q496A9 | |UniProt=Q86WH2,Q496A9 | ||
|association_with_transcript=0bp_to_ENST00000283172,ENST00000336061,ENST00000540088,ENST00000541539,ENST00000542104,NM_178169,NR_040718,uc001ssd.2,uc009zqn.2_5end | |||
|cluster_id=chr12:65004292..65004306,+ | |||
|description=CAGE_peak_4_at_RASSF3_5end | |||
|id=chr12:65004292..65004306,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.79e-16!42;CL:0000860!1.60e-15!45;CL:0000766!1.50e-13!76;CL:0002194!1.99e-13!63;CL:0000576!1.99e-13!63;CL:0000040!1.99e-13!63;CL:0000559!1.99e-13!63;CL:0002009!1.48e-12!65;CL:0000839!1.46e-09!70;CL:0000557!1.62e-09!71;CL:0000738!2.36e-08!140;CL:0002087!3.20e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.10e-14;33!CL:0002057;3.10e-14;33!CL:0000473;3.59e-12;39!CL:0000234;3.59e-12;39!CL:0000576;3.02e-11;48!CL:0000766;6.39e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.31e-17,48;CL:0000234,1.31e-17,48;CL:0000860,1.38e-17,42;CL:0002057,1.38e-17,42;CL:0000766,3.40e-15,72;CL:0002194,5.91e-15,59;CL:0000576,5.91e-15,59;CL:0000040,5.91e-15,59;CL:0000559,5.91e-15,59;CL:0002009,3.54e-14,61;CL:0000839,4.07e-11,66;CL:0000557,4.71e-11,67;CL:0000738,8.91e-10,136;CL:0002087,2.76e-09,115;CL:0000115,2.26e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002057;3.80e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.05e-10!216;UBERON:0002193!1.28e-09!112;UBERON:0002390!2.20e-09!102;UBERON:0003061!2.20e-09!102;UBERON:0000926!2.77e-07!448;UBERON:0004120!2.77e-07!448;UBERON:0006603!2.77e-07!448;UBERON:0001009!4.48e-07!113 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,7.34e-13,203;UBERON:0000926,5.60e-11,315;UBERON:0004120,5.60e-11,315;UBERON:0006603,5.60e-11,315;UBERON:0002390,2.72e-10,98;UBERON:0003061,2.72e-10,98;UBERON:0002193,3.76e-10,108;UBERON:0002371,1.74e-07,76;UBERON:0002405,3.87e-07,93;UBERON:0001009,7.29e-07,112 | |||
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| ||
|short_description=p4@RASSF3 | |||
}} | }} |
Latest revision as of 21:12, 19 September 2015
Short description: | p4@RASSF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RASSF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000283172, ENST00000336061, ENST00000540088, ENST00000541539, ENST00000542104, NM_178169, NR_040718, uc001ssd.2, uc009zqn.2_5end |
EntrezGene: | RASSF3 |
HGNC: | 14271 |
UniProt: | Q86WH2Q496A9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.31e-17 | 48 |
phagocyte | 1.31e-17 | 48 |
classical monocyte | 1.38e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.38e-17 | 42 |
myeloid leukocyte | 3.40e-15 | 72 |
monopoietic cell | 5.91e-15 | 59 |
monocyte | 5.91e-15 | 59 |
monoblast | 5.91e-15 | 59 |
promonocyte | 5.91e-15 | 59 |
macrophage dendritic cell progenitor | 3.54e-14 | 61 |
myeloid lineage restricted progenitor cell | 4.07e-11 | 66 |
granulocyte monocyte progenitor cell | 4.71e-11 | 67 |
leukocyte | 8.91e-10 | 136 |
nongranular leukocyte | 2.76e-09 | 115 |
endothelial cell | 2.26e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 7.34e-13 | 203 |
mesoderm | 5.60e-11 | 315 |
mesoderm-derived structure | 5.60e-11 | 315 |
presumptive mesoderm | 5.60e-11 | 315 |
hematopoietic system | 2.72e-10 | 98 |
blood island | 2.72e-10 | 98 |
hemolymphoid system | 3.76e-10 | 108 |
bone marrow | 1.74e-07 | 76 |
immune system | 3.87e-07 | 93 |
circulatory system | 7.29e-07 | 112 |