FFCP PHASE1:Hg19::chr10:91098875..91098881,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3437 | |EntrezGene=3437 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5411 | |HGNC=5411 | ||
|TSSclassifier=strong | |||
|UniProt=O14879 | |UniProt=O14879 | ||
|association_with_transcript=459bp_to_AB464597,BT007284,CU674680,CU678838,JF432276_5end | |association_with_transcript=459bp_to_AB464597,BT007284,CU674680,CU678838,JF432276_5end | ||
|cluster_id=chr10:91098875..91098881,+ | |||
|coexpression_cluster_id=C174 | |||
|description=CAGE_peak_8_at_IFIT3_5end | |description=CAGE_peak_8_at_IFIT3_5end | ||
|id=chr10:91098875..91098881,+ | |id=chr10:91098875..91098881,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.00e-26!42;CL:0000860!8.02e-24!45;CL:0002194!3.40e-20!63;CL:0000576!3.40e-20!63;CL:0000040!3.40e-20!63;CL:0000559!3.40e-20!63;CL:0002009!2.21e-19!65;CL:0000839!1.49e-17!70;CL:0000766!2.85e-17!76;CL:0000557!3.22e-17!71;CL:0000763!1.01e-11!112;CL:0000049!1.01e-11!112;CL:0002087!2.25e-11!119;CL:0002031!1.22e-10!124;CL:0000738!1.55e-09!140;CL:0002032!1.63e-08!165;CL:0000837!1.63e-08!165;CL:0000037!7.09e-08!172;CL:0000566!7.09e-08!172;CL:0000988!4.66e-07!182 | |ontology_enrichment_celltype=CL:0002057!6.00e-26!42;CL:0000860!8.02e-24!45;CL:0002194!3.40e-20!63;CL:0000576!3.40e-20!63;CL:0000040!3.40e-20!63;CL:0000559!3.40e-20!63;CL:0002009!2.21e-19!65;CL:0000839!1.49e-17!70;CL:0000766!2.85e-17!76;CL:0000557!3.22e-17!71;CL:0000763!1.01e-11!112;CL:0000049!1.01e-11!112;CL:0002087!2.25e-11!119;CL:0002031!1.22e-10!124;CL:0000738!1.55e-09!140;CL:0002032!1.63e-08!165;CL:0000837!1.63e-08!165;CL:0000037!7.09e-08!172;CL:0000566!7.09e-08!172;CL:0000988!4.66e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.24e-41;33!CL:0002057;4.24e-41;33!CL:0000473;4.78e-27;39!CL:0000234;4.78e-27;39!CL:0000576;4.86e-20;48!CL:0002593;3.52e-11;2!CL:0000766;5.78e-10;69!CL:0000763;1.06e-09;100!CL:0002087;1.24e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.04e-37,42;CL:0002057,1.04e-37,42;CL:0000473,5.64e-33,48;CL:0000234,5.64e-33,48;CL:0002194,2.46e-26,59;CL:0000576,2.46e-26,59;CL:0000040,2.46e-26,59;CL:0000559,2.46e-26,59;CL:0002009,1.77e-25,61;CL:0000839,1.48e-23,66;CL:0000557,3.31e-23,67;CL:0000766,1.35e-21,72;CL:0000763,2.39e-14,108;CL:0000049,2.39e-14,108;CL:0002087,1.86e-13,115;CL:0002031,6.97e-13,120;CL:0000738,2.51e-11,136;CL:0002593,3.70e-11,2;CL:0002032,1.68e-09,161;CL:0000837,1.68e-09,161;CL:0000037,4.36e-09,168;CL:0000988,1.34e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.14e-26;42!CL:0000049;6.94e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.90e-16!80;UBERON:0001474!1.47e-14!86;UBERON:0002390!1.15e-13!102;UBERON:0003061!1.15e-13!102;UBERON:0002193!7.78e-12!112;UBERON:0004765!1.85e-11!101;UBERON:0001434!1.85e-11!101;UBERON:0002405!2.88e-10!115;UBERON:0002204!1.17e-08!167;UBERON:0001737!1.14e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;3.52e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.85e-20,76;UBERON:0001474,5.88e-19,82;UBERON:0004765,2.92e-17,90;UBERON:0002405,1.07e-16,93;UBERON:0002390,7.77e-16,98;UBERON:0003061,7.77e-16,98;UBERON:0001434,1.63e-15,100;UBERON:0002193,2.39e-14,108;UBERON:0002204,2.30e-11,167;UBERON:0002456,3.70e-11,2;UBERON:0003081,2.88e-09,203 | |||
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|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0.575384784644301,0,1.89185783910868,0.344745680736619,0,0,0,0,0,3.06083892370903,0,0.639337125799041,1.31940520074686,0.199463657621632,0.426224750532694,4.35313857942876,1.70215567407342,1.24564449799115,0.75374599577023,0.521482918420201,0,9.08099253950053,1.84138817993782,2.84816148696796,0.211255286311942,0,0,0.112328631146495,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337169380156203,0,0,0.217879444092406,0.474541238222193,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,1.46228093778771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0,0,0,0,0,0.889811221596536,0,0.151230923763239,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0,0.734210113519403,0,0,0,0,0,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p8@IFIT3 | |short_description=p8@IFIT3 | ||
}} | }} |
Latest revision as of 22:19, 19 September 2015
Short description: | p8@IFIT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_IFIT3_5end |
Coexpression cluster: | C174_CD14_Neutrophils_Smooth_mesothelioma_embryonic_Monocytederived_Eosinophils |
Association with transcript: | 459bp_to_AB464597, BT007284, CU674680, CU678838, JF432276_5end |
EntrezGene: | IFIT3 |
HGNC: | 5411 |
UniProt: | O14879 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.04e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.04e-37 | 42 |
defensive cell | 5.64e-33 | 48 |
phagocyte | 5.64e-33 | 48 |
monopoietic cell | 2.46e-26 | 59 |
monocyte | 2.46e-26 | 59 |
monoblast | 2.46e-26 | 59 |
promonocyte | 2.46e-26 | 59 |
macrophage dendritic cell progenitor | 1.77e-25 | 61 |
myeloid lineage restricted progenitor cell | 1.48e-23 | 66 |
granulocyte monocyte progenitor cell | 3.31e-23 | 67 |
myeloid leukocyte | 1.35e-21 | 72 |
myeloid cell | 2.39e-14 | 108 |
common myeloid progenitor | 2.39e-14 | 108 |
nongranular leukocyte | 1.86e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 6.97e-13 | 120 |
leukocyte | 2.51e-11 | 136 |
smooth muscle cell of the internal thoracic artery | 3.70e-11 | 2 |
hematopoietic oligopotent progenitor cell | 1.68e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-09 | 161 |
hematopoietic stem cell | 4.36e-09 | 168 |
hematopoietic cell | 1.34e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.85e-20 | 76 |
bone element | 5.88e-19 | 82 |
skeletal element | 2.92e-17 | 90 |
immune system | 1.07e-16 | 93 |
hematopoietic system | 7.77e-16 | 98 |
blood island | 7.77e-16 | 98 |
skeletal system | 1.63e-15 | 100 |
hemolymphoid system | 2.39e-14 | 108 |
musculoskeletal system | 2.30e-11 | 167 |
internal thoracic artery | 3.70e-11 | 2 |
lateral plate mesoderm | 2.88e-09 | 203 |