FFCP PHASE1:Hg19::chr6:80340958..80340983,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83699 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15567 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UJC5 | |||
|association_with_transcript=-16bp_to_ENST00000369838,NM_031469,uc003piz.1_5end | |||
|cluster_id=chr6:80340958..80340983,+ | |||
|description=CAGE_peak_3_at_SH3BGRL2_5end | |||
|id=chr6:80340958..80340983,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.29e-14!254;CL:0002139!9.16e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.37e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.30e-11,253;CL:0002139,2.91e-07,24 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.79e-08;82 | |||
|ontology_enrichment_disease=DOID:305!1.05e-09!106;DOID:0050687!7.80e-09!143;DOID:299!1.89e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:299;5.57e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:299,5.17e-08,25;DOID:305,6.23e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.22e-33!115;UBERON:0004111!7.08e-25!241;UBERON:0000477!2.56e-22!286;UBERON:0000025!2.48e-21!194;UBERON:0000481!8.15e-21!347;UBERON:0005743!9.19e-21!86;UBERON:0000073!9.31e-21!94;UBERON:0001016!9.31e-21!94;UBERON:0001049!3.37e-20!57;UBERON:0005068!3.37e-20!57;UBERON:0006241!3.37e-20!57;UBERON:0007135!3.37e-20!57;UBERON:0001017!4.96e-20!82;UBERON:0000483!7.07e-20!309;UBERON:0000119!7.40e-20!312;UBERON:0002346!2.39e-18!90;UBERON:0002616!4.43e-18!59;UBERON:0003075!5.13e-18!86;UBERON:0007284!5.13e-18!86;UBERON:0000955!2.70e-17!69;UBERON:0006238!2.70e-17!69;UBERON:0003080!6.63e-16!42;UBERON:0002780!1.88e-15!41;UBERON:0001890!1.88e-15!41;UBERON:0006240!1.88e-15!41;UBERON:0000924!4.23e-15!173;UBERON:0006601!4.23e-15!173;UBERON:0004121!1.16e-14!169;UBERON:0000064!3.21e-14!219;UBERON:0002020!7.02e-14!34;UBERON:0003528!7.02e-14!34;UBERON:0001869!7.88e-14!32;UBERON:0001893!9.77e-14!34;UBERON:0000033!1.23e-13!123;UBERON:0000475!1.41e-13!365;UBERON:0000153!2.16e-13!129;UBERON:0007811!2.16e-13!129;UBERON:0003056!2.93e-13!61;UBERON:0002791!3.78e-13!33;UBERON:0000922!7.10e-13!612;UBERON:0002619!1.87e-12!22;UBERON:0001007!4.30e-12!155;UBERON:0001555!4.30e-12!155;UBERON:0007026!4.30e-12!155;UBERON:0004119!4.58e-12!169;UBERON:0000925!4.58e-12!169;UBERON:0006595!4.58e-12!169;UBERON:0005177!6.83e-12!107;UBERON:0001950!8.39e-12!20;UBERON:0004921!8.45e-12!129;UBERON:0004185!8.45e-12!129;UBERON:0002050!9.81e-12!605;UBERON:0005423!9.81e-12!605;UBERON:0000468!1.41e-11!659;UBERON:0000923!1.78e-11!604;UBERON:0005291!1.78e-11!604;UBERON:0006598!1.78e-11!604;UBERON:0002532!1.78e-11!604;UBERON:0000466!1.89e-11!126;UBERON:0000956!4.47e-11!25;UBERON:0000203!4.47e-11!25;UBERON:0000480!1.81e-10!626;UBERON:0000467!2.16e-10!625;UBERON:0000464!4.09e-09!104;UBERON:0000077!5.69e-09!130;UBERON:0000062!1.22e-07!511;UBERON:0001041!2.45e-07!98;UBERON:0005911!2.48e-07!82;UBERON:0009569!4.16e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.74e-13;22!UBERON:0001869;7.98e-13;32!UBERON:0001950;1.03e-12;20!UBERON:0003528;1.63e-12;34!UBERON:0002020;1.63e-12;34!UBERON:0001893;2.64e-12;34!UBERON:0002791;2.80e-12;32!UBERON:0002780;7.14e-12;41!UBERON:0001890;7.14e-12;41!UBERON:0000956;4.04e-11;25!UBERON:0000203;4.04e-11;25!UBERON:0000073;1.41e-10;53!UBERON:0002616;1.41e-10;53!UBERON:0007023;9.27e-10;114!UBERON:0001017;2.02e-08;75!UBERON:0000955;4.35e-08;68!UBERON:0001016;2.35e-07;83!UBERON:0005409;6.37e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.54e-35,114;UBERON:0011216,3.84e-24,223;UBERON:0004111,1.01e-22,240;UBERON:0000025,1.87e-20,192;UBERON:0001049,1.58e-19,56;UBERON:0005068,1.58e-19,56;UBERON:0006241,1.58e-19,56;UBERON:0007135,1.58e-19,56;UBERON:0001017,6.37e-19,81;UBERON:0001016,1.26e-18,89;UBERON:0000073,3.08e-18,53;UBERON:0002616,3.08e-18,53;UBERON:0002346,1.98e-16,86;UBERON:0000955,2.82e-16,68;UBERON:0006238,2.82e-16,68;UBERON:0003075,4.77e-16,82;UBERON:0007284,4.77e-16,82;UBERON:0002780,5.08e-16,41;UBERON:0001890,5.08e-16,41;UBERON:0003080,5.08e-16,41;UBERON:0006240,5.08e-16,41;UBERON:0000483,7.78e-16,306;UBERON:0000119,9.89e-16,309;UBERON:0003528,2.80e-14,34;UBERON:0002020,2.80e-14,34;UBERON:0001869,3.33e-14,32;UBERON:0001893,3.98e-14,34;UBERON:0002619,1.72e-13,22;UBERON:0002791,1.92e-13,32;UBERON:0003056,2.70e-13,61;UBERON:0001950,8.90e-13,20;UBERON:0004121,1.22e-12,171;UBERON:0000924,1.22e-12,171;UBERON:0006601,1.22e-12,171;UBERON:0010371,4.20e-12,104;UBERON:0000922,1.10e-11,592;UBERON:0000956,3.37e-11,25;UBERON:0000203,3.37e-11,25;UBERON:0005177,1.20e-10,101;UBERON:0005423,1.86e-10,581;UBERON:0004921,2.94e-09,118;UBERON:0001007,6.50e-09,145;UBERON:0001555,6.50e-09,145;UBERON:0007026,6.50e-09,145;UBERON:0004119,6.85e-09,160;UBERON:0000925,6.85e-09,160;UBERON:0006595,6.85e-09,160;UBERON:0010314,8.70e-09,132;UBERON:0002050,5.01e-08,564;UBERON:0000923,6.62e-08,560;UBERON:0010316,6.62e-08,560;UBERON:0005291,6.62e-08,560;UBERON:0006598,6.62e-08,560;UBERON:0010317,6.62e-08,560;UBERON:0002532,6.62e-08,560;UBERON:0005911,8.87e-07,82;UBERON:0000489,8.98e-07,31;UBERON:0009569,9.12e-07,112 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,1.78784437770915,0,0,0,0,2.94880723801811,2.79120467188971,3.49506195408276,2.37390280405608,0.247532705920093,0.662794751455832,1.34465029290355,1.80808358407193,2.19093027116212,1.46379839637152,0.861847406537515,0.816002764977012,0.626909442956176,0.572471974262113,0.821246550437305,1.75759695432724,0.0764134057479513,0,0,0.393364276848904,0,0,1.83884244895785,1.8072355126695,1.84877005083394,0,0,1.76160263600908,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.68152568894461,2.63384084775077,0,0.393010762749165,0,0,0,0,1.94826728407911,0.111410456885174,0,0,0,0,0,0,0,0,0.593146252648242,0.535081656179426,3.1360657141493,0.113309342697566,0,0,0,0,0,0,0.752875595388864,0.383959833463255,0,0.473554504088034,1.64225599384209,0.80642697289893,0.267440195783507,0.144824403882799,0,0,1.2786256184353,0,0,0.144846518960824,0,0,2.07976597760949,3.54767035940102,1.58102614247627,6.94189100137877,2.5500670180478,1.11235332835329,1.9472843619281,2.08955684759121,0,0,0,0,5.36658499890104,3.4409383804245,3.12426451446835,3.39184765154406,2.09749718104953,2.75118041940067,3.55291443112578,6.20200222006389,8.89415656716776,5.35552980423472,4.02829317109147,3.80136052859256,2.4406205754817,8.45625084795498,4.0507097394088,7.76907636071494,5.83776368828041,5.51796254368279,3.06633274931766,1.89853131913626,5.86245580577303,0,0,0.436094052142534,0,0,0.132409180813219,0,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0.538842688278752,0.653847612453835,1.81628913173918,0.576175924479999,0,0.624320153660641,0,0.149448680551801,0.469737994575059,1.13311061057692,1.54495887372473,0.61246251376468,1.35117749042945,0.309977343527296,0,0.247266929278557,0,0,1.17835279767846,1.50142223846357,0.277064115484183,0,0,0.300476117813194,0.907457465280168,0.179389635688862,0,0.423863802319124,0,0.206105058476878,0,0.18611685633159,0,0,0,0.184099797284599,0,0,0.503760491138201,0.339121184620975,0.966304265816484,0.818238361772504,3.44165514466805,1.46368447355514,2.38553582978673,1.97529702878181,2.59152637538426,1.7662459561294,0.72995471815166,0,0,0,0.464367928031979,0.721879481669586,0.709840800239063,0.842923450390509,0.723033089650446,1.32352767278873,1.08939722046203,0.474541238222193,0.404493924480493,0.784885860501384,1.53898862778556,7.38155454624648,1.40241773803446,0.8231480226628,1.47008711385542,15.2106041786197,10.8110993834539,12.4065880403095,0,8.11723694384549,2.91665277507493,1.42675371031213,0,3.82010095164197,2.4998880192803,0,0,0,3.70977295920246,6.69229557144183,2.30986316417718,2.77791307545966,3.61482889245737,2.37061319387782,2.57545848628462,0,0,0,0,1.00789276919316,1.98485136139341,2.32852159027406,0,1.15014803749563,0,0,0,0,0,0.761974731506028,0.381988425558278,2.34434894420094,0,0.616964956219941,0,0.571652865261156,2.01835951821649,0.43596006883328,1.98013371716565,3.23179289394444,0,1.690605505112,0,0,0.514414748524284,0,0,0.142977993658148,0,0,2.28015329005615,0,1.58390374586686,3.01439377059586,5.22920075160176,3.99891964728228,0,0,0,0,0,0,0.579125226670317,0.61642896765115,0.537182889719687,0,0.197030760201927,0,0.128343036279748,1.27047312111232,3.90419561572865,0.773288812777695,5.02548796003046,3.18969375826582,0,0,0,0.36807447515742,0,1.62759014219841,0.207970861530807,0.535286966391485,0.315404830067869,0.117141414992713,1.80567659836631,2.27407504055985,2.0694614258501,1.32845119707087,2.76553752812555,0.0868836144680828,0.587403472388222,1.37257369524342,0.620304078368662,0.215714200818617,0,0.303127571446259,0,1.20956117331872,0,0,0,0.128139149255701,0.511707249066704,1.28683136914886,0,0,0.710246901252508,0.492762936082855,0.519254429183621,0.464841513839837,5.55953468121462,2.80709058424599,13.6279863625127,0,0.182091168006717,0.524497659837696,5.41439535488894,9.31885578963419,3.92174884588428,4.38417673959782,4.96092655796516,4.54933536283586,4.59253004246592,2.15915916102139,4.62681758070868,1.08378575017541,1.00337954770971,2.29388645740534,2.49322802678617,3.1342465661105,0.657779629937804,0.261435451024901,2.3080511260475,2.29610251989794,3.90454073597164,8.24328093181778,2.38080608527693,3.21787049690293,1.72279661398852,1.95018073810956,1.6068392984416,1.7400729292582,1.3864375540318,1.5350367472613,1.10269257987624,0.537101224341368,1.0151168573996,1.44885266607372,0.890320356467374,4.13212288402445,3.0750410778417,1.14851441245126,8.49725359186619,0.929691098594572,1.5740617341532,0.6970372701606,0,0,0,1.8532421910392,2.71937284809783,1.116475108079,2.53103539774981,1.90630193923825,1.79128453917934,2.1396949401696,0,0,0.899362287916574,0.823611089208164,0.824686816419805,1.2130948894399,0,0,0.48763373908959,0.243713489631284,0,0.818999468447914,0,1.13008116620243,0.551365343546124,0,1.31535265576129,0.578775534266688,0.655894752046633,3.85529716229138,0.6196469961995,1.40847801266121,2.43799298746888,0.589494246078727,1.4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| |||
|short_description=p3@SH3BGRL2 | |||
}} |
Latest revision as of 22:36, 19 September 2015
Short description: | p3@SH3BGRL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SH3BGRL2_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_ENST00000369838, NM_031469, uc003piz.1_5end |
EntrezGene: | SH3BGRL2 |
HGNC: | 15567 |
UniProt: | Q9UJC5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.30e-11 | 253 |
endothelial cell of vascular tree | 2.91e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 5.17e-08 | 25 |
carcinoma | 6.23e-08 | 106 |