FFCP PHASE1:Hg19::chr3:122399656..122399694,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54625 | |EntrezGene=54625 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29232 | |HGNC=29232 | ||
|TSSclassifier=strong | |||
|UniProt=E9PGX7,Q460N5,C9J8I1,Q8N546 | |UniProt=E9PGX7,Q460N5,C9J8I1,Q8N546 | ||
|association_with_transcript=0bp_to_ENST00000310290,ENST00000398162,NM_017554,uc003efq.3_5end | |association_with_transcript=0bp_to_ENST00000310290,ENST00000398162,NM_017554,uc003efq.3_5end | ||
|cluster_id=chr3:122399656..122399694,+ | |||
|coexpression_cluster_id=C413 | |||
|description=CAGE_peak_1_at_PARP14_5end | |description=CAGE_peak_1_at_PARP14_5end | ||
|id=chr3:122399656..122399694,+ | |id=chr3:122399656..122399694,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.21e-30!140;CL:0000766!1.25e-30!76;CL:0002031!1.84e-28!124;CL:0002087!2.63e-28!119;CL:0000557!3.67e-27!71;CL:0000839!3.68e-27!70;CL:0000037!8.04e-27!172;CL:0000566!8.04e-27!172;CL:0002194!1.87e-26!63;CL:0000576!1.87e-26!63;CL:0000040!1.87e-26!63;CL:0000559!1.87e-26!63;CL:0002032!3.62e-26!165;CL:0000837!3.62e-26!165;CL:0002009!6.13e-26!65;CL:0000988!4.84e-23!182;CL:0002057!8.69e-23!42;CL:0000763!2.69e-22!112;CL:0000049!2.69e-22!112;CL:0000860!2.28e-21!45;CL:0000134!9.42e-07!358 | |ontology_enrichment_celltype=CL:0000738!1.21e-30!140;CL:0000766!1.25e-30!76;CL:0002031!1.84e-28!124;CL:0002087!2.63e-28!119;CL:0000557!3.67e-27!71;CL:0000839!3.68e-27!70;CL:0000037!8.04e-27!172;CL:0000566!8.04e-27!172;CL:0002194!1.87e-26!63;CL:0000576!1.87e-26!63;CL:0000040!1.87e-26!63;CL:0000559!1.87e-26!63;CL:0002032!3.62e-26!165;CL:0000837!3.62e-26!165;CL:0002009!6.13e-26!65;CL:0000988!4.84e-23!182;CL:0002057!8.69e-23!42;CL:0000763!2.69e-22!112;CL:0000049!2.69e-22!112;CL:0000860!2.28e-21!45;CL:0000134!9.42e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.18e-18;33!CL:0002057;1.18e-18;33!CL:0000473;2.14e-18;39!CL:0000234;2.14e-18;39!CL:0000576;4.47e-16;48!CL:0000766;4.09e-14;69!CL:0002087;1.72e-09;104!CL:0000763;7.45e-08;100!CL:0000738;1.54e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.28e-32,72;CL:0000738,2.00e-31,136;CL:0002031,2.17e-29,120;CL:0002087,2.87e-29,115;CL:0000839,1.46e-28,66;CL:0000557,1.53e-28,67;CL:0002194,5.55e-28,59;CL:0000576,5.55e-28,59;CL:0000040,5.55e-28,59;CL:0000559,5.55e-28,59;CL:0002009,2.21e-27,61;CL:0000037,2.37e-27,168;CL:0002032,8.50e-27,161;CL:0000837,8.50e-27,161;CL:0000473,4.12e-26,48;CL:0000234,4.12e-26,48;CL:0000988,9.36e-24,177;CL:0000763,5.86e-23,108;CL:0000049,5.86e-23,108;CL:0000860,6.78e-23,42;CL:0002057,6.78e-23,42;CL:0000134,6.35e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;7.90e-17;42!CL:0000049;4.26e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.01e-30!112;UBERON:0002390!3.69e-29!102;UBERON:0003061!3.69e-29!102;UBERON:0002371!2.22e-23!80;UBERON:0002405!9.71e-23!115;UBERON:0001474!2.66e-22!86;UBERON:0004765!7.00e-21!101;UBERON:0001434!7.00e-21!101;UBERON:0002204!1.22e-08!167;UBERON:0003081!1.27e-07!216 | |ontology_enrichment_uberon=UBERON:0002193!6.01e-30!112;UBERON:0002390!3.69e-29!102;UBERON:0003061!3.69e-29!102;UBERON:0002371!2.22e-23!80;UBERON:0002405!9.71e-23!115;UBERON:0001474!2.66e-22!86;UBERON:0004765!7.00e-21!101;UBERON:0001434!7.00e-21!101;UBERON:0002204!1.22e-08!167;UBERON:0003081!1.27e-07!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.90e-31,108;UBERON:0002390,2.57e-30,98;UBERON:0003061,2.57e-30,98;UBERON:0002405,2.61e-27,93;UBERON:0002371,1.48e-24,76;UBERON:0001474,2.42e-23,82;UBERON:0004765,2.21e-22,90;UBERON:0001434,7.15e-21,100;UBERON:0003081,1.62e-08,203;UBERON:0002204,2.01e-08,167 | |||
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| ||
|short_description=p1@PARP14 | |short_description=p1@PARP14 | ||
}} | }} |
Latest revision as of 00:12, 20 September 2015
Short description: | p1@PARP14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PARP14_5end |
Coexpression cluster: | C413_CD14_Smooth_gall_mesothelioma_meningioma_Fibroblast_Neutrophils |
Association with transcript: | 0bp_to_ENST00000310290, ENST00000398162, NM_017554, uc003efq.3_5end |
EntrezGene: | PARP14 |
HGNC: | 29232 |
UniProt: | E9PGX7Q460N5C9J8I1Q8N546 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.28e-32 | 72 |
leukocyte | 2.00e-31 | 136 |
hematopoietic lineage restricted progenitor cell | 2.17e-29 | 120 |
nongranular leukocyte | 2.87e-29 | 115 |
myeloid lineage restricted progenitor cell | 1.46e-28 | 66 |
granulocyte monocyte progenitor cell | 1.53e-28 | 67 |
monopoietic cell | 5.55e-28 | 59 |
monocyte | 5.55e-28 | 59 |
monoblast | 5.55e-28 | 59 |
promonocyte | 5.55e-28 | 59 |
macrophage dendritic cell progenitor | 2.21e-27 | 61 |
hematopoietic stem cell | 2.37e-27 | 168 |
hematopoietic oligopotent progenitor cell | 8.50e-27 | 161 |
hematopoietic multipotent progenitor cell | 8.50e-27 | 161 |
defensive cell | 4.12e-26 | 48 |
phagocyte | 4.12e-26 | 48 |
hematopoietic cell | 9.36e-24 | 177 |
myeloid cell | 5.86e-23 | 108 |
common myeloid progenitor | 5.86e-23 | 108 |
classical monocyte | 6.78e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.78e-23 | 42 |
mesenchymal cell | 6.35e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.90e-31 | 108 |
hematopoietic system | 2.57e-30 | 98 |
blood island | 2.57e-30 | 98 |
immune system | 2.61e-27 | 93 |
bone marrow | 1.48e-24 | 76 |
bone element | 2.42e-23 | 82 |
skeletal element | 2.21e-22 | 90 |
skeletal system | 7.15e-21 | 100 |
lateral plate mesoderm | 1.62e-08 | 203 |
musculoskeletal system | 2.01e-08 | 167 |