FFCP PHASE1:Hg19::chr18:56296351..56296362,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115701 | |EntrezGene=115701 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |HGNC=20565 | ||
|TSSclassifier=strong | |||
|UniProt=Q86TB3 | |UniProt=Q86TB3 | ||
|association_with_transcript=-162bp_to_ENST00000361673,NM_052947,uc002lhj.3_5end | |association_with_transcript=-162bp_to_ENST00000361673,NM_052947,uc002lhj.3_5end | ||
|cluster_id=chr18:56296351..56296362,- | |||
|coexpression_cluster_id=C1057 | |coexpression_cluster_id=C1057 | ||
|description=CAGE_peak_25_at_ALPK2_5end | |description=CAGE_peak_25_at_ALPK2_5end | ||
|id=chr18:56296351..56296362,- | |id=chr18:56296351..56296362,- | ||
|ontology_enrichment_celltype=CL:0002322!1.06e-19!5 | |ontology_enrichment_celltype=CL:0002322!1.06e-19!5 | ||
|ontology_enrichment_celltype_v019=CL:0000946;5.42e-15;1!CL:0000786;5.42e-15;1!CL:0002127;1.97e-14;1!CL:0000911;1.97e-14;1!CL:0000814;1.97e-14;1!CL:0000333;1.95e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,5.42e-15,1;CL:0000786,5.42e-15,1;CL:0000980,5.42e-15,1;CL:0002127,3.15e-14,1;CL:0000914,3.15e-14,1;CL:0000911,3.15e-14,1;CL:0000814,3.15e-14,1;CL:0002042,3.15e-14,1;CL:0002039,3.15e-14,1;CL:0002040,3.15e-14,1;CL:0002041,3.15e-14,1;CL:0000785,3.82e-08,2;CL:0000955,3.82e-08,2;CL:0000818,3.82e-08,2;CL:0000954,3.82e-08,2;CL:0000816,3.82e-08,2;CL:0000893,9.19e-08,2;CL:0002489,9.19e-08,2;CL:0000809,9.19e-08,2;CL:0000808,9.19e-08,2;CL:0000894,9.19e-08,2;CL:0000806,9.19e-08,2;CL:0000807,9.19e-08,2;CL:0000805,9.19e-08,2;CL:0002425,9.19e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0004140;8.17e-15;1!UBERON:0010226;1.97e-14;1!UBERON:0005062;4.70e-14;4!UBERON:0007284;4.70e-14;4!UBERON:0004872;1.32e-08;7!CL:0000954;3.82e-08;2!CL:0002425;7.27e-08;2!UBERON:0003104;9.67e-07;31 | |||
|ontology_enrichment_disease=DOID:3095!7.24e-11!22;DOID:2994!7.24e-11!22;DOID:1287!3.14e-10!4;DOID:114!2.23e-09!2 | |ontology_enrichment_disease=DOID:3095!7.24e-11!22;DOID:2994!7.24e-11!22;DOID:1287!3.14e-10!4;DOID:114!2.23e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:2355;1.97e-14;1!DOID:0060058;1.33e-12;10!DOID:169;1.10e-09;6!DOID:74;7.27e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,1.41e-14,1;DOID:0060058,1.22e-12,10;DOID:169,1.06e-09,6;DOID:74,6.15e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002370!8.18e-10!4;UBERON:0005058!8.18e-10!4;UBERON:0009113!8.18e-10!4;UBERON:0003295!8.18e-10!4;UBERON:0005562!8.18e-10!4;UBERON:0004177!8.73e-10!7;UBERON:0007100!6.27e-07!27;UBERON:0003978!8.13e-07!3;UBERON:0009751!8.13e-07!3;UBERON:0000946!8.13e-07!3;UBERON:0002523!8.13e-07!3;UBERON:0005983!8.13e-07!3;UBERON:0002165!8.13e-07!3;UBERON:0002062!8.13e-07!3;UBERON:0007280!8.13e-07!3 | |ontology_enrichment_uberon=UBERON:0002370!8.18e-10!4;UBERON:0005058!8.18e-10!4;UBERON:0009113!8.18e-10!4;UBERON:0003295!8.18e-10!4;UBERON:0005562!8.18e-10!4;UBERON:0004177!8.73e-10!7;UBERON:0007100!6.27e-07!27;UBERON:0003978!8.13e-07!3;UBERON:0009751!8.13e-07!3;UBERON:0000946!8.13e-07!3;UBERON:0002523!8.13e-07!3;UBERON:0005983!8.13e-07!3;UBERON:0002165!8.13e-07!3;UBERON:0002062!8.13e-07!3;UBERON:0007280!8.13e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;2.12e-18;3!UBERON:0000946;2.12e-18;3!UBERON:0001389;6.65e-15;1!UBERON:0000026;6.65e-15;1!UBERON:0008784;6.65e-15;1!UBERON:0006058;6.65e-15;1!UBERON:0003663;6.65e-15;1!UBERON:0004256;6.65e-15;1!UBERON:0004708;6.65e-15;1!UBERON:0002101;6.65e-15;1!UBERON:0004709;6.65e-15;1!UBERON:0002529;6.65e-15;1!UBERON:0010538;6.65e-15;1!UBERON:0003661;6.65e-15;1!UBERON:0010890;6.65e-15;1!UBERON:0002471;6.65e-15;1!UBERON:0001383;6.65e-15;1!UBERON:0010758;6.65e-15;1!UBERON:0010707;6.65e-15;1!UBERON:0000978;6.65e-15;1!UBERON:0002103;6.65e-15;1!UBERON:0001665;6.65e-15;1!UBERON:0003823;6.65e-15;1!UBERON:0000154;6.65e-15;1!UBERON:0010709;6.65e-15;1!UBERON:0002084;1.97e-14;1!UBERON:0002135;1.97e-14;1!UBERON:0002146;1.97e-14;1!UBERON:0002082;1.97e-14;1!UBERON:0005623;1.97e-14;1!UBERON:0000013;1.95e-11;5!UBERON:0002410;1.95e-11;5!UBERON:0000948;7.29e-10;22!UBERON:0007100;1.04e-08;25!UBERON:0005090;4.23e-08;2!UBERON:0001630;4.23e-08;2!UBERON:0002133;7.27e-08;2!UBERON:0000010;9.64e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,2.12e-18,3;UBERON:0009751,2.12e-18,3;UBERON:0000946,2.12e-18,3;UBERON:0002523,2.12e-18,3;UBERON:0005983,2.12e-18,3;UBERON:0002165,2.12e-18,3;UBERON:0002062,2.12e-18,3;UBERON:0007280,2.12e-18,3;UBERON:0005418,6.22e-15,1;UBERON:0001389,6.22e-15,1;UBERON:0000026,6.22e-15,1;UBERON:0008784,6.22e-15,1;UBERON:0006058,6.22e-15,1;UBERON:0003663,6.22e-15,1;UBERON:0004256,6.22e-15,1;UBERON:0004708,6.22e-15,1;UBERON:0002101,6.22e-15,1;UBERON:0004709,6.22e-15,1;UBERON:0002529,6.22e-15,1;UBERON:0010538,6.22e-15,1;UBERON:0003661,6.22e-15,1;UBERON:0010890,6.22e-15,1;UBERON:0002471,6.22e-15,1;UBERON:0001383,6.22e-15,1;UBERON:0004357,6.22e-15,1;UBERON:0004347,6.22e-15,1;UBERON:0005420,6.22e-15,1;UBERON:0005732,6.22e-15,1;UBERON:0010758,6.22e-15,1;UBERON:0010707,6.22e-15,1;UBERON:0000978,6.22e-15,1;UBERON:0002103,6.22e-15,1;UBERON:0001665,6.22e-15,1;UBERON:0003823,6.22e-15,1;UBERON:0000154,6.22e-15,1;UBERON:0010709,6.22e-15,1;UBERON:0005733,6.22e-15,1;UBERON:0005730,6.22e-15,1;UBERON:0002146,1.61e-14,1;UBERON:0005623,1.61e-14,1;UBERON:0002084,1.84e-14,1;UBERON:0002082,1.84e-14,1;UBERON:0010226,1.84e-14,1;UBERON:0002135,2.41e-14,1;UBERON:0000013,1.85e-11,5;UBERON:0002410,1.85e-11,5;UBERON:0000948,4.58e-09,24;UBERON:0005498,4.58e-09,24;UBERON:0004140,4.58e-09,24;UBERON:0009881,4.58e-09,24;UBERON:0004141,4.58e-09,24;UBERON:0003084,4.58e-09,24;UBERON:0007005,4.58e-09,24;UBERON:0004139,4.58e-09,24;UBERON:0004291,4.58e-09,24;UBERON:0004177,1.92e-08,7;UBERON:0005057,1.92e-08,7;UBERON:0004797,1.99e-08,7;UBERON:0005090,4.09e-08,2;UBERON:0001630,4.09e-08,2;UBERON:0007100,4.41e-08,27;UBERON:0002133,8.04e-08,2;UBERON:0000010,9.37e-07,8 | |||
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| ||
|short_description=p25@ALPK2 | |short_description=p25@ALPK2 | ||
}} | }} |
Latest revision as of 00:20, 20 September 2015
Short description: | p25@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_ALPK2_5end |
Coexpression cluster: | C1057_heart_teratocarcinoma_lymphangiectasia_plasma_adult_left_skeletal |
Association with transcript: | -162bp_to_ENST00000361673, NM_052947, uc002lhj.3_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | Q86TB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 5.42e-15 | 1 |
plasma cell | 5.42e-15 | 1 |
plasmablast | 5.42e-15 | 1 |
innate effector T cell | 3.15e-14 | 1 |
immature NK T cell | 3.15e-14 | 1 |
effector T cell | 3.15e-14 | 1 |
mature NK T cell | 3.15e-14 | 1 |
immature NK T cell stage IV | 3.15e-14 | 1 |
immature NK T cell stage I | 3.15e-14 | 1 |
immature NK T cell stage II | 3.15e-14 | 1 |
immature NK T cell stage III | 3.15e-14 | 1 |
mature B cell | 3.82e-08 | 2 |
pre-B-II cell | 3.82e-08 | 2 |
transitional stage B cell | 3.82e-08 | 2 |
small pre-B-II cell | 3.82e-08 | 2 |
immature B cell | 3.82e-08 | 2 |
thymocyte | 9.19e-08 | 2 |
double negative thymocyte | 9.19e-08 | 2 |
double-positive, alpha-beta thymocyte | 9.19e-08 | 2 |
DN4 thymocyte | 9.19e-08 | 2 |
DN1 thymic pro-T cell | 9.19e-08 | 2 |
DN2 thymocyte | 9.19e-08 | 2 |
DN3 thymocyte | 9.19e-08 | 2 |
immature single positive thymocyte | 9.19e-08 | 2 |
early T lineage precursor | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.41e-14 | 1 |
lymphoma | 1.22e-12 | 10 |
neuroendocrine tumor | 1.06e-09 | 6 |
hematopoietic system disease | 6.15e-08 | 2 |