FFCP PHASE1:Hg19::chr1:204380872..204380883,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:204380872..204380883,- to FFCP PHASE1:Hg19::chr1:204380872..204380883,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84919 | |EntrezGene=84919 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14951 | |HGNC=14951 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SWA1 | |UniProt=Q5SWA1 | ||
|association_with_transcript=35bp_to_ENST00000367188_5end | |||
|cluster_id=chr1:204380872..204380883,- | |||
|coexpression_cluster_id=C399 | |||
|description=CAGE_peak_5_at_PPP1R15B_5end | |||
|id=chr1:204380872..204380883,- | |||
|ontology_enrichment_celltype=CL:0000738!9.05e-29!140;CL:0000860!1.10e-21!45;CL:0000766!2.05e-21!76;CL:0000037!2.37e-21!172;CL:0000566!2.37e-21!172;CL:0002057!1.01e-20!42;CL:0000988!1.01e-20!182;CL:0002031!1.96e-19!124;CL:0002087!1.17e-18!119;CL:0002032!1.37e-18!165;CL:0000837!1.37e-18!165;CL:0000557!2.44e-18!71;CL:0002009!1.07e-15!65;CL:0000839!2.04e-15!70;CL:0000763!1.19e-14!112;CL:0000049!1.19e-14!112;CL:0002194!1.32e-14!63;CL:0000576!1.32e-14!63;CL:0000040!1.32e-14!63;CL:0000559!1.32e-14!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.70e-29;33!CL:0002057;2.70e-29;33!CL:0000473;8.72e-21;39!CL:0000234;8.72e-21;39!CL:0000576;5.00e-17;48!CL:0000766;6.66e-16;69!CL:0000094;9.09e-13;8!CL:0000081;4.61e-11;11!CL:0002087;1.32e-10;104!CL:0000738;4.29e-10;136!CL:0000624;2.00e-09;6!CL:0000763;1.20e-07;100!CL:0000988;1.86e-07;177!CL:0000451;1.91e-07;10!CL:0000453;3.59e-07;5!CL:0000791;5.77e-07;18!CL:0000789;5.77e-07;18!CL:0002419;5.77e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.65e-49,136;CL:0000988,1.62e-37,177;CL:0000037,5.13e-37,168;CL:0000766,1.40e-34,72;CL:0002031,5.70e-32,120;CL:0002032,6.68e-32,161;CL:0000837,6.68e-32,161;CL:0000860,2.26e-31,42;CL:0002057,2.26e-31,42;CL:0002087,1.30e-29,115;CL:0000557,2.54e-28,67;CL:0000473,8.35e-28,48;CL:0000234,8.35e-28,48;CL:0000763,1.27e-24,108;CL:0000049,1.27e-24,108;CL:0000839,4.10e-24,66;CL:0002009,1.23e-23,61;CL:0002194,1.85e-21,59;CL:0000576,1.85e-21,59;CL:0000040,1.85e-21,59;CL:0000559,1.85e-21,59;CL:0000094,9.20e-13,8;CL:0000081,4.91e-11,11;CL:0000624,1.60e-09,6;CL:0000134,1.00e-08,354;CL:0002320,3.76e-08,361;CL:0000451,1.55e-07,10;CL:0000838,1.87e-07,52;CL:0000453,2.50e-07,5;CL:0000542,3.30e-07,53;CL:0000051,3.30e-07,53;CL:0000791,5.27e-07,18;CL:0000789,5.27e-07,18;CL:0002420,5.27e-07,18;CL:0002419,5.27e-07,18;CL:0000790,5.27e-07,18;CL:0000219,6.47e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;4.09e-23;42!CL:0000790;5.77e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.04e-14!80;UBERON:0002390!1.23e-14!102;UBERON:0003061!1.23e-14!102;UBERON:0001474!3.41e-14!86;UBERON:0002193!2.55e-12!112;UBERON:0004765!1.10e-10!101;UBERON:0001434!1.10e-10!101;UBERON:0002405!2.22e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.11e-24,76;UBERON:0002390,2.62e-24,98;UBERON:0003061,2.62e-24,98;UBERON:0001474,5.89e-23,82;UBERON:0002193,1.35e-20,108;UBERON:0004765,1.11e-19,90;UBERON:0002405,8.59e-19,93;UBERON:0001434,2.29e-16,100;UBERON:0002384,2.21e-07,371;UBERON:0003081,2.87e-07,203 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0.893922188854576,0,0,0,0.261185628199839,0,0,0.218441372130172,1.31883489114227,0.123766352960047,0,0,0,0.730310090387373,0,0.492484232307152,0.408001382488506,0,0,0,0.251085279189606,0.382067028739756,0.410502947249729,0.157421562627358,6.68719270643137,11.1310525448192,5.57338043937874,0,0.30120591877825,0,0.232401601740905,0.142169232487422,1.76160263600908,8.86392653651004,11.4310335057981,9.33146744078163,0,0,0,1.01778767145695,0.755751887377619,0.727752183563449,1.62700325833979,1.6446715520873,2.47765096716083,8.05538698502021,9.73410684810582,9.69577142543199,5.86067657252252,3.87290810150296,2.70852973188684,1.12945403725563,1.09162460023138,0.674170453335254,3.67300670845083,3.53021929783703,5.75403413219137,5.60747210317417,3.98927315243264,3.83602275479425,4.35313857942876,3.97169657283798,6.22822248995575,8.54245461872927,7.82224377630302,6.5156653411535,3.02699751316684,5.89244217580104,4.1140110367315,0.633765858935825,0.850417199860174,1.04829322754188,1.12328631146495,1.50176892841506,1.12507910687956,0.570025487482497,0.79566670879636,0.547992461293902,0,1.63841583378639,1.77901850772711,1.28019066769952,0,1.14950487990897,1.32208974556972,0,15.3687501659551,16.4426413023863,16.0554755812596,5.28685314316103,3.92355994087075,0,20.6545258619525,14.9344089844683,10.6912779479745,0.167186495390678,2.60737813306872,1.4203434172042,1.94826728407911,0.668462741311041,2.94605907474837,1.10766947291811,1.35401931882508,1.0247305578054,0.260118695119756,0.164437904603676,0.276350017785848,0.289803085735052,1.4828656316206,1.33770414044857,1.04535523804977,0.339928028092699,2.68254345521345,3.77990190030893,2.02415753615602,0.637130828648193,1.30216690771284,0,0.301150238155546,0.383959833463255,0,0,0,13.3060450528323,13.1045695933919,12.5997231378035,0,0.670700859703636,0.12786256184353,0,0,0.434539556882471,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.196468613246569,0.364295288292542,0.370784442784429,0.324547393654683,0.696518949197069,0.531831842075461,4.05434061319081,4.0039643754609,3.71457501329565,0.39752481473341,0,0.347140501607594,0,0,1.10047216776027,0,0,0.35576626268671,0,0,0.760272105718513,0.24406205754817,0,0,0.267899184852239,0,0.337834441449967,0,0,0,14.495845917967,19.3890132074163,0,0.496971951695318,0.506522046658319,0.264818361626438,0.286836620748814,0.709336764396714,0.560677600142307,0,0.49333509683432,0,0.269421344139376,0.326923806226917,0,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0,0.280901613404497,0,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0,0,0.125118519871964,0,0.438977620880838,0,0.45071417671979,0.113432183160021,0,0.427114777637135,0.211931901159562,0.600182192168805,0.206105058476878,0.257640540045629,0.37223371266318,0,0.0974370051611986,0.252433774244115,0,0,0.710019185033229,0.10075209822764,0,0,0,0,0.609868530647977,0.265059536642971,0.232387885739037,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0.721879481669586,0.946454400318751,1.85443159085912,1.68707720918437,1.10293972732394,1.52515610864684,2.13543557199987,0.808987848960987,0.98110732562673,0.769494313892781,0.738155454624648,0,0.4115740113314,0,1.26755034821831,0,0,0.441463099414651,0.491953754172454,0,0.329250856225877,0,0,0.462942225792648,0.325808305310325,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,1.58040879591855,2.57545848628462,0,0,0.148631162288728,0,0,0.425325291727159,0,0,0,2.95597942737566,0.44024217006613,13.4763275101502,9.22367701868553,12.8767282094908,0,0,0,0,0.308482478109971,0,0,0.112131084345361,0,0.1466765716419,0.387815147273333,0,0.845302752556,0.26593811658487,0,0,0,0.266422179016099,0,0.542621605391443,0,0.65147236858747,0.710783897485092,0,0,0,0.299918973546171,0,0.502257091432126,2.10833939483032,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,12.0188763723176,16.1720681144638,11.5508732651774,0,0,0,0.335032530668698,0.637938751653163,5.24304916763028,5.9832291840805,4.97298616123243,0.36807447515742,0.500170521059677,0,0.415941723061614,0.892144943985809,0.946214490203608,0.35142424497814,0,0,0,0,0.184369168541703,0.173767228936166,0.195801157462741,0.343143423810856,4.34212854858063,8.84428223356329,3.62873696531711,0,3.32870879020994,0.907170879989041,0,0.153461973288062,0.280660094433074,0.128139149255701,0.511707249066704,0.321707842287215,0,0.308419387605311,0.355123450626254,0.0821271560138091,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0.34444334449382,0.546273504020151,0.131124414959424,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0.328014645699706,0.976135183992909,1.854738209659,0.54941678891006,0.165018999841176,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0.614014698904518,0.275673144969061,0,0.290033387828457,0.0852266274161009,0.0890320356467374,0.330569830721956,0.7687602694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| ||
|short_description=p5@PPP1R15B | |||
}} | }} |
Latest revision as of 01:00, 20 September 2015
Short description: | p5@PPP1R15B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PPP1R15B_5end |
Coexpression cluster: | C399_CD19_Eosinophils_CD4_CD8_CD14_Basophils_Natural |
Association with transcript: | 35bp_to_ENST00000367188_5end |
EntrezGene: | PPP1R15B |
HGNC: | 14951 |
UniProt: | Q5SWA1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.11e-24 | 76 |
hematopoietic system | 2.62e-24 | 98 |
blood island | 2.62e-24 | 98 |
bone element | 5.89e-23 | 82 |
hemolymphoid system | 1.35e-20 | 108 |
skeletal element | 1.11e-19 | 90 |
immune system | 8.59e-19 | 93 |
skeletal system | 2.29e-16 | 100 |
connective tissue | 2.21e-07 | 371 |
lateral plate mesoderm | 2.87e-07 | 203 |