FFCP PHASE1:Hg19::chr6:116782527..116782550,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=441168 | |EntrezGene=441168 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33391 | |HGNC=33391 | ||
|TSSclassifier=strong | |||
|UniProt=Q5R3K4 | |UniProt=Q5R3K4 | ||
|association_with_transcript=0bp_to_ENST00000368606_5end | |association_with_transcript=0bp_to_ENST00000368606_5end | ||
|cluster_id=chr6:116782527..116782550,+ | |||
|coexpression_cluster_id=C92 | |coexpression_cluster_id=C92 | ||
|description=CAGE_peak_4_at_FAM26F_5end | |description=CAGE_peak_4_at_FAM26F_5end | ||
|id=chr6:116782527..116782550,+ | |id=chr6:116782527..116782550,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.54e-39!42;CL:0002009!1.33e-36!65;CL:0002194!4.89e-36!63;CL:0000576!4.89e-36!63;CL:0000040!4.89e-36!63;CL:0000559!4.89e-36!63;CL:0000860!1.19e-35!45;CL:0000766!2.22e-33!76;CL:0000557!1.56e-32!71;CL:0000839!2.64e-31!70;CL:0000763!3.79e-21!112;CL:0000049!3.79e-21!112;CL:0002087!7.81e-17!119;CL:0000738!2.49e-16!140;CL:0002031!9.47e-16!124;CL:0002032!4.52e-12!165;CL:0000837!4.52e-12!165;CL:0000037!8.49e-12!172;CL:0000566!8.49e-12!172;CL:0000988!1.65e-10!182;CL:0002393!5.29e-09!9;CL:0002397!5.29e-09!9;CL:0000875!5.96e-08!3;CL:0002396!5.96e-08!3;CL:0002619!1.67e-07!3 | |ontology_enrichment_celltype=CL:0002057!6.54e-39!42;CL:0002009!1.33e-36!65;CL:0002194!4.89e-36!63;CL:0000576!4.89e-36!63;CL:0000040!4.89e-36!63;CL:0000559!4.89e-36!63;CL:0000860!1.19e-35!45;CL:0000766!2.22e-33!76;CL:0000557!1.56e-32!71;CL:0000839!2.64e-31!70;CL:0000763!3.79e-21!112;CL:0000049!3.79e-21!112;CL:0002087!7.81e-17!119;CL:0000738!2.49e-16!140;CL:0002031!9.47e-16!124;CL:0002032!4.52e-12!165;CL:0000837!4.52e-12!165;CL:0000037!8.49e-12!172;CL:0000566!8.49e-12!172;CL:0000988!1.65e-10!182;CL:0002393!5.29e-09!9;CL:0002397!5.29e-09!9;CL:0000875!5.96e-08!3;CL:0002396!5.96e-08!3;CL:0002619!1.67e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000576;6.70e-46;48!CL:0000875;8.04e-27;3!CL:0002396;8.04e-27;3!CL:0000860;2.90e-26;33!CL:0002057;2.90e-26;33!CL:0000473;2.89e-18;39!CL:0000234;2.89e-18;39!CL:0000766;1.36e-17;69!CL:0002393;2.31e-13;6!CL:0002397;2.31e-13;6!CL:0002619;5.13e-12;3!CL:0000763;1.68e-10;100!CL:0002087;2.01e-08;104!CL:0000738;2.27e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.91e-55,42;CL:0002057,7.91e-55,42;CL:0000473,1.26e-47,48;CL:0000234,1.26e-47,48;CL:0002194,2.77e-47,59;CL:0000576,2.77e-47,59;CL:0000040,2.77e-47,59;CL:0000559,2.77e-47,59;CL:0002009,1.17e-45,61;CL:0000839,5.04e-42,66;CL:0000557,2.32e-41,67;CL:0000766,2.57e-38,72;CL:0002393,5.63e-34,9;CL:0002397,5.63e-34,9;CL:0000875,8.05e-27,3;CL:0002396,8.05e-27,3;CL:0000763,1.26e-24,108;CL:0000049,1.26e-24,108;CL:0002087,6.02e-23,115;CL:0002031,7.24e-22,120;CL:0000738,6.16e-19,136;CL:0002032,1.64e-15,161;CL:0000837,1.64e-15,161;CL:0000037,9.83e-15,168;CL:0000988,8.01e-14,177;CL:0002619,4.46e-12,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.38e-38;42!CL:0000049;1.79e-11;108!UBERON:0010227;1.10e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.70e-30!102;UBERON:0003061!1.70e-30!102;UBERON:0002371!1.42e-27!80;UBERON:0002193!1.50e-26!112;UBERON:0001474!7.47e-25!86;UBERON:0002405!6.88e-23!115;UBERON:0004765!1.08e-20!101;UBERON:0001434!1.08e-20!101;UBERON:0007023!9.50e-20!115;UBERON:0003081!2.96e-10!216;UBERON:0002204!9.83e-10!167;UBERON:0000062!3.25e-08!511 | |ontology_enrichment_uberon=UBERON:0002390!1.70e-30!102;UBERON:0003061!1.70e-30!102;UBERON:0002371!1.42e-27!80;UBERON:0002193!1.50e-26!112;UBERON:0001474!7.47e-25!86;UBERON:0002405!6.88e-23!115;UBERON:0004765!1.08e-20!101;UBERON:0001434!1.08e-20!101;UBERON:0007023!9.50e-20!115;UBERON:0003081!2.96e-10!216;UBERON:0002204!9.83e-10!167;UBERON:0000062!3.25e-08!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0002079;1.10e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.64e-36,76;UBERON:0001474,2.51e-33,82;UBERON:0004765,4.03e-30,90;UBERON:0002405,4.64e-29,93;UBERON:0002390,1.97e-27,98;UBERON:0003061,1.97e-27,98;UBERON:0001434,7.93e-27,100;UBERON:0002193,1.26e-24,108;UBERON:0002204,7.68e-15,167;UBERON:0003081,3.84e-13,203;UBERON:0002079,1.15e-09,1;UBERON:0000926,3.03e-07,315;UBERON:0004120,3.03e-07,315;UBERON:0006603,3.03e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0,0,4.47830948479849,0.971680998056939,1.80302897343931,1.01778767145695,0.377875943688809,1.94067248950253,0,0.411167888021826,0,1.43846196161075,2.56160706529101,4.7296445977717,0,0.645484683583826,0,0.564727018627814,0.818718450173537,0.674170453335254,0,0.320929027076094,0,6.92687730392104,6.18337338627059,11.9342930149154,0.580418477257168,0.56738522469114,0,1.50749199154046,1.5644487552606,4.56096573880745,0,0.368277635987565,0.632924774881769,3.16882929467913,6.80333759888139,6.9187353017764,0.336985893439485,0.300353785683013,0,12.2555479808737,22.2786678462981,25.0249890657548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.22206028986725,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0.13223260174269,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0.0679697329768317,0.0657727735628491,0,0,0.313972371402056,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0,0,0.617393264863557,0.437119121007915,0,0.980593287015622,0,0.196308467114945,0,0,0,0.469919589899268,0.709036767709349,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.639701945702943,0.476128862927481,0.129177819672012,0.248298857183432,0,0.0636471582781649,0,0.217716747896961,0,0,0.358611026963382,0,0,0,0,0,0,0.244482888365733,0,0,0.805095174364105,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0,0,4.47830948479849,0.971680998056939,1.80302897343931,1.01778767145695,0.377875943688809,1.94067248950253,0,0.411167888021826,0,1.43846196161075,2.56160706529101,4.7296445977717,0,0.645484683583826,0,0.564727018627814,0.818718450173537,0.674170453335254,0,0.320929027076094,0,6.92687730392104,6.18337338627059,11.9342930149154,0.580418477257168,0.56738522469114,0,1.50749199154046,1.5644487552606,4.56096573880745,0,0.368277635987565,0.632924774881769,3.16882929467913,6.80333759888139,6.9187353017764,0.336985893439485,0.300353785683013,0,12.2555479808737,22.2786678462981,25.0249890657548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.22206028986725,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0.13223260174269,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0.0679697329768317,0.0657727735628491,0,0,0.313972371402056,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0,0,0.617393264863557,0.437119121007915,0,0.980593287015622,0,0.196308467114945,0,0,0,0.469919589899268,0.709036767709349,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.639701945702943,0.476128862927481,0.129177819672012,0.248298857183432,0,0.0636471582781649,0,0.217716747896961,0,0,0.358611026963382,0,0,0,0,0,0,0.244482888365733,0,0,0.805095174364105,0 | ||
|short_description=p4@FAM26F | |short_description=p4@FAM26F | ||
}} | }} |
Latest revision as of 01:05, 20 September 2015
Short description: | p4@FAM26F |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAM26F_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | 0bp_to_ENST00000368606_5end |
EntrezGene: | FAM26F |
HGNC: | 33391 |
UniProt: | Q5R3K4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.91e-55 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.91e-55 | 42 |
defensive cell | 1.26e-47 | 48 |
phagocyte | 1.26e-47 | 48 |
monopoietic cell | 2.77e-47 | 59 |
monocyte | 2.77e-47 | 59 |
monoblast | 2.77e-47 | 59 |
promonocyte | 2.77e-47 | 59 |
macrophage dendritic cell progenitor | 1.17e-45 | 61 |
myeloid lineage restricted progenitor cell | 5.04e-42 | 66 |
granulocyte monocyte progenitor cell | 2.32e-41 | 67 |
myeloid leukocyte | 2.57e-38 | 72 |
intermediate monocyte | 5.63e-34 | 9 |
CD14-positive, CD16-positive monocyte | 5.63e-34 | 9 |
non-classical monocyte | 8.05e-27 | 3 |
CD14-low, CD16-positive monocyte | 8.05e-27 | 3 |
myeloid cell | 1.26e-24 | 108 |
common myeloid progenitor | 1.26e-24 | 108 |
nongranular leukocyte | 6.02e-23 | 115 |
hematopoietic lineage restricted progenitor cell | 7.24e-22 | 120 |
leukocyte | 6.16e-19 | 136 |
hematopoietic oligopotent progenitor cell | 1.64e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.64e-15 | 161 |
hematopoietic stem cell | 9.83e-15 | 168 |
hematopoietic cell | 8.01e-14 | 177 |
adult endothelial progenitor cell | 4.46e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.64e-36 | 76 |
bone element | 2.51e-33 | 82 |
skeletal element | 4.03e-30 | 90 |
immune system | 4.64e-29 | 93 |
hematopoietic system | 1.97e-27 | 98 |
blood island | 1.97e-27 | 98 |
skeletal system | 7.93e-27 | 100 |
hemolymphoid system | 1.26e-24 | 108 |
musculoskeletal system | 7.68e-15 | 167 |
lateral plate mesoderm | 3.84e-13 | 203 |
left cardiac atrium | 1.15e-09 | 1 |
mesoderm | 3.03e-07 | 315 |
mesoderm-derived structure | 3.03e-07 | 315 |
presumptive mesoderm | 3.03e-07 | 315 |