FFCP PHASE1:Hg19::chr6:116783037..116783057,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=441168 | |EntrezGene=441168 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=33391 | |HGNC=33391 | ||
|TSSclassifier=strong | |||
|UniProt=B9EJB0 | |UniProt=B9EJB0 | ||
|association_with_transcript=0bp_to_BC146842_5end | |association_with_transcript=0bp_to_BC146842_5end | ||
|cluster_id=chr6:116783037..116783057,+ | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_3_at_FAM26F_5end | |description=CAGE_peak_3_at_FAM26F_5end | ||
|id=chr6:116783037..116783057,+ | |id=chr6:116783037..116783057,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.63e-65!42;CL:0000860!7.12e-60!45;CL:0002009!2.98e-48!65;CL:0002194!1.02e-47!63;CL:0000576!1.02e-47!63;CL:0000040!1.02e-47!63;CL:0000559!1.02e-47!63;CL:0000766!9.40e-44!76;CL:0000557!4.44e-43!71;CL:0000839!1.11e-41!70;CL:0002087!3.68e-33!119;CL:0000738!9.62e-33!140;CL:0002031!7.36e-30!124;CL:0000763!1.94e-29!112;CL:0000049!1.94e-29!112;CL:0000037!7.39e-27!172;CL:0000566!7.39e-27!172;CL:0000988!1.86e-24!182;CL:0002032!4.59e-24!165;CL:0000837!4.59e-24!165;CL:0002393!7.17e-15!9;CL:0002397!7.17e-15!9;CL:0000875!1.56e-07!3;CL:0002396!1.56e-07!3;CL:0000134!9.64e-07!358 | |ontology_enrichment_celltype=CL:0002057!4.63e-65!42;CL:0000860!7.12e-60!45;CL:0002009!2.98e-48!65;CL:0002194!1.02e-47!63;CL:0000576!1.02e-47!63;CL:0000040!1.02e-47!63;CL:0000559!1.02e-47!63;CL:0000766!9.40e-44!76;CL:0000557!4.44e-43!71;CL:0000839!1.11e-41!70;CL:0002087!3.68e-33!119;CL:0000738!9.62e-33!140;CL:0002031!7.36e-30!124;CL:0000763!1.94e-29!112;CL:0000049!1.94e-29!112;CL:0000037!7.39e-27!172;CL:0000566!7.39e-27!172;CL:0000988!1.86e-24!182;CL:0002032!4.59e-24!165;CL:0000837!4.59e-24!165;CL:0002393!7.17e-15!9;CL:0002397!7.17e-15!9;CL:0000875!1.56e-07!3;CL:0002396!1.56e-07!3;CL:0000134!9.64e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.62e-49;33!CL:0002057;5.62e-49;33!CL:0000576;1.41e-47;48!CL:0000473;1.21e-31;39!CL:0000234;1.21e-31;39!CL:0000766;5.39e-22;69!CL:0000875;6.93e-15;3!CL:0002396;6.93e-15;3!CL:0002087;1.09e-14;104!CL:0002393;5.33e-13;6!CL:0002397;5.33e-13;6!CL:0000763;6.17e-12;100!CL:0000738;5.99e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.12e-77,42;CL:0002057,4.12e-77,42;CL:0000473,1.07e-66,48;CL:0000234,1.07e-66,48;CL:0002194,2.78e-56,59;CL:0000576,2.78e-56,59;CL:0000040,2.78e-56,59;CL:0000559,2.78e-56,59;CL:0002009,2.92e-54,61;CL:0000839,9.81e-50,66;CL:0000557,6.56e-49,67;CL:0000766,4.03e-45,72;CL:0002087,3.80e-35,115;CL:0002031,2.10e-33,120;CL:0000738,1.11e-28,136;CL:0000763,4.21e-28,108;CL:0000049,4.21e-28,108;CL:0002393,4.26e-25,9;CL:0002397,4.26e-25,9;CL:0002032,3.61e-23,161;CL:0000837,3.61e-23,161;CL:0000037,6.45e-22,168;CL:0000988,1.88e-20,177;CL:0000875,4.75e-15,3;CL:0002396,4.75e-15,3;CL:0000134,3.42e-08,354;CL:0002320,6.79e-08,361;CL:0000219,7.59e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.60e-52;42!CL:0000049;1.28e-10;108!UBERON:0004872;7.69e-07;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.97e-51!102;UBERON:0003061!4.97e-51!102;UBERON:0002193!4.86e-49!112;UBERON:0002371!1.21e-38!80;UBERON:0002405!1.23e-36!115;UBERON:0001474!5.04e-35!86;UBERON:0004765!7.15e-28!101;UBERON:0001434!7.15e-28!101;UBERON:0003081!4.37e-19!216;UBERON:0002204!1.50e-13!167;UBERON:0000178!5.21e-09!15;UBERON:0000179!5.21e-09!15;UBERON:0000463!5.21e-09!15 | |ontology_enrichment_uberon=UBERON:0002390!4.97e-51!102;UBERON:0003061!4.97e-51!102;UBERON:0002193!4.86e-49!112;UBERON:0002371!1.21e-38!80;UBERON:0002405!1.23e-36!115;UBERON:0001474!5.04e-35!86;UBERON:0004765!7.15e-28!101;UBERON:0001434!7.15e-28!101;UBERON:0003081!4.37e-19!216;UBERON:0002204!1.50e-13!167;UBERON:0000178!5.21e-09!15;UBERON:0000179!5.21e-09!15;UBERON:0000463!5.21e-09!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,3.67e-45,93;UBERON:0002193,2.10e-43,108;UBERON:0002390,1.47e-42,98;UBERON:0003061,1.47e-42,98;UBERON:0002371,1.91e-42,76;UBERON:0001474,6.51e-39,82;UBERON:0004765,6.28e-35,90;UBERON:0001434,7.77e-31,100;UBERON:0003081,1.92e-18,203;UBERON:0002204,5.40e-16,167;UBERON:0000926,2.31e-09,315;UBERON:0004120,2.31e-09,315;UBERON:0006603,2.31e-09,315;UBERON:0002106,1.63e-07,3;UBERON:0004854,1.63e-07,3;UBERON:0009034,1.63e-07,3;UBERON:0002095,1.63e-07,3;UBERON:0004782,1.63e-07,3;UBERON:0003281,1.63e-07,3;UBERON:0009664,1.63e-07,3;UBERON:0002296,1.63e-07,3;UBERON:0005602,1.63e-07,3;UBERON:0001179,1.63e-07,3;UBERON:0006293,1.63e-07,3;UBERON:0002384,1.73e-07,371 | |||
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| ||
|short_description=p3@FAM26F | |short_description=p3@FAM26F | ||
}} | }} |
Latest revision as of 01:09, 20 September 2015
Short description: | p3@FAM26F |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FAM26F_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_BC146842_5end |
EntrezGene: | FAM26F |
HGNC: | 33391 |
UniProt: | B9EJB0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.12e-77 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.12e-77 | 42 |
defensive cell | 1.07e-66 | 48 |
phagocyte | 1.07e-66 | 48 |
monopoietic cell | 2.78e-56 | 59 |
monocyte | 2.78e-56 | 59 |
monoblast | 2.78e-56 | 59 |
promonocyte | 2.78e-56 | 59 |
macrophage dendritic cell progenitor | 2.92e-54 | 61 |
myeloid lineage restricted progenitor cell | 9.81e-50 | 66 |
granulocyte monocyte progenitor cell | 6.56e-49 | 67 |
myeloid leukocyte | 4.03e-45 | 72 |
nongranular leukocyte | 3.80e-35 | 115 |
hematopoietic lineage restricted progenitor cell | 2.10e-33 | 120 |
leukocyte | 1.11e-28 | 136 |
myeloid cell | 4.21e-28 | 108 |
common myeloid progenitor | 4.21e-28 | 108 |
intermediate monocyte | 4.26e-25 | 9 |
CD14-positive, CD16-positive monocyte | 4.26e-25 | 9 |
hematopoietic oligopotent progenitor cell | 3.61e-23 | 161 |
hematopoietic multipotent progenitor cell | 3.61e-23 | 161 |
hematopoietic stem cell | 6.45e-22 | 168 |
hematopoietic cell | 1.88e-20 | 177 |
non-classical monocyte | 4.75e-15 | 3 |
CD14-low, CD16-positive monocyte | 4.75e-15 | 3 |
mesenchymal cell | 3.42e-08 | 354 |
connective tissue cell | 6.79e-08 | 361 |
motile cell | 7.59e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
immune system | 3.67e-45 | 93 |
hemolymphoid system | 2.10e-43 | 108 |
hematopoietic system | 1.47e-42 | 98 |
blood island | 1.47e-42 | 98 |
bone marrow | 1.91e-42 | 76 |
bone element | 6.51e-39 | 82 |
skeletal element | 6.28e-35 | 90 |
skeletal system | 7.77e-31 | 100 |
lateral plate mesoderm | 1.92e-18 | 203 |
musculoskeletal system | 5.40e-16 | 167 |
mesoderm | 2.31e-09 | 315 |
mesoderm-derived structure | 2.31e-09 | 315 |
presumptive mesoderm | 2.31e-09 | 315 |
spleen | 1.63e-07 | 3 |
gastrointestinal system mesentery | 1.63e-07 | 3 |
stomach region | 1.63e-07 | 3 |
mesentery | 1.63e-07 | 3 |
gastrointestinal system serosa | 1.63e-07 | 3 |
mesentery of stomach | 1.63e-07 | 3 |
gut mesentery | 1.63e-07 | 3 |
dorsal mesentery | 1.63e-07 | 3 |
dorsal mesogastrium | 1.63e-07 | 3 |
peritoneal cavity | 1.63e-07 | 3 |
spleen primordium | 1.63e-07 | 3 |
connective tissue | 1.73e-07 | 371 |