FFCP PHASE1:Hg19::chr18:59000817..59000828,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28316 | |EntrezGene=28316 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1760 | |HGNC=1760 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HBT6 | |UniProt=Q9HBT6 | ||
|association_with_transcript=-159bp_to_ENST00000536675,uc002lif.2_5end | |association_with_transcript=-159bp_to_ENST00000536675,uc002lif.2_5end | ||
|cluster_id=chr18:59000817..59000828,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_CDH20_5end | |description=CAGE_peak_3_at_CDH20_5end | ||
|id=chr18:59000817..59000828,+ | |id=chr18:59000817..59000828,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.22e-20;82!UBERON:0006241;2.10e-15;3!UBERON:0003057;2.10e-15;3!UBERON:0006215;6.88e-15;3!UBERON:0002532;3.36e-07;206!UBERON:0010316;3.36e-07;206 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.46e-92!57;UBERON:0005068!3.46e-92!57;UBERON:0006241!3.46e-92!57;UBERON:0007135!3.46e-92!57;UBERON:0001017!4.19e-76!82;UBERON:0002616!9.58e-76!59;UBERON:0005743!3.02e-75!86;UBERON:0000955!8.31e-73!69;UBERON:0006238!8.31e-73!69;UBERON:0003075!2.68e-72!86;UBERON:0007284!2.68e-72!86;UBERON:0000073!2.80e-70!94;UBERON:0001016!2.80e-70!94;UBERON:0002346!1.45e-68!90;UBERON:0002780!4.55e-66!41;UBERON:0001890!4.55e-66!41;UBERON:0006240!4.55e-66!41;UBERON:0003080!2.55e-64!42;UBERON:0001893!2.67e-61!34;UBERON:0002020!3.73e-61!34;UBERON:0003528!3.73e-61!34;UBERON:0002791!1.47e-58!33;UBERON:0001869!2.03e-55!32;UBERON:0003056!1.97e-53!61;UBERON:0007023!4.07e-50!115;UBERON:0000033!1.91e-48!123;UBERON:0000153!1.21e-45!129;UBERON:0007811!1.21e-45!129;UBERON:0004121!2.30e-42!169;UBERON:0000924!4.30e-41!173;UBERON:0006601!4.30e-41!173;UBERON:0002619!2.52e-38!22;UBERON:0001950!1.52e-37!20;UBERON:0000956!4.79e-37!25;UBERON:0000203!4.79e-37!25;UBERON:0003076!1.10e-27!15;UBERON:0003057!1.10e-27!15;UBERON:0002308!8.09e-27!9;UBERON:0000125!8.09e-27!9;UBERON:0002420!2.30e-26!9;UBERON:0007245!2.30e-26!9;UBERON:0010009!2.30e-26!9;UBERON:0010011!2.30e-26!9;UBERON:0000454!2.30e-26!9;UBERON:0004732!2.77e-22!13;UBERON:0000025!1.59e-21!194;UBERON:0009663!3.59e-21!7;UBERON:0004733!1.44e-19!12;UBERON:0002028!1.44e-19!12;UBERON:0007277!1.44e-19!12;UBERON:0002298!7.99e-19!8;UBERON:0004111!6.31e-18!241;UBERON:0001871!1.34e-17!7;UBERON:0000483!3.99e-17!309;UBERON:0000119!7.82e-17!312;UBERON:0000475!9.84e-16!365;UBERON:0000064!3.06e-15!219;UBERON:0000477!6.00e-15!286;UBERON:0000200!9.49e-13!6;UBERON:0000369!3.16e-12!4;UBERON:0002435!3.16e-12!4;UBERON:0000204!3.16e-12!4;UBERON:0010082!3.16e-12!4;UBERON:0002680!5.18e-12!9;UBERON:0001895!5.18e-12!9;UBERON:0010092!5.18e-12!9;UBERON:0006331!2.08e-10!3;UBERON:0000988!2.51e-10!3;UBERON:0002240!2.51e-10!3;UBERON:0002021!2.65e-10!5;UBERON:0000349!4.06e-10!5;UBERON:0002771!4.61e-10!3;UBERON:0001896!4.90e-10!3;UBERON:0005290!4.90e-10!3;UBERON:0010096!4.90e-10!3;UBERON:0001872!7.99e-10!5;UBERON:0000062!1.06e-09!511;UBERON:0005383!2.50e-09!3;UBERON:0005382!2.50e-09!3;UBERON:0000481!1.03e-07!347;UBERON:0005162!1.11e-07!2;UBERON:0000122!1.11e-07!2;UBERON:0001875!1.26e-07!2;UBERON:0006514!1.26e-07!2;UBERON:0002148!2.42e-07!2;UBERON:0009662!2.42e-07!2;UBERON:0001894!5.91e-07!7;UBERON:0006222!5.91e-07!7;UBERON:0001876!6.97e-07!2;UBERON:0000922!9.52e-07!612;UBERON:0001873!9.92e-07!2;UBERON:0010122!9.92e-07!2 | |ontology_enrichment_uberon=UBERON:0001049!3.46e-92!57;UBERON:0005068!3.46e-92!57;UBERON:0006241!3.46e-92!57;UBERON:0007135!3.46e-92!57;UBERON:0001017!4.19e-76!82;UBERON:0002616!9.58e-76!59;UBERON:0005743!3.02e-75!86;UBERON:0000955!8.31e-73!69;UBERON:0006238!8.31e-73!69;UBERON:0003075!2.68e-72!86;UBERON:0007284!2.68e-72!86;UBERON:0000073!2.80e-70!94;UBERON:0001016!2.80e-70!94;UBERON:0002346!1.45e-68!90;UBERON:0002780!4.55e-66!41;UBERON:0001890!4.55e-66!41;UBERON:0006240!4.55e-66!41;UBERON:0003080!2.55e-64!42;UBERON:0001893!2.67e-61!34;UBERON:0002020!3.73e-61!34;UBERON:0003528!3.73e-61!34;UBERON:0002791!1.47e-58!33;UBERON:0001869!2.03e-55!32;UBERON:0003056!1.97e-53!61;UBERON:0007023!4.07e-50!115;UBERON:0000033!1.91e-48!123;UBERON:0000153!1.21e-45!129;UBERON:0007811!1.21e-45!129;UBERON:0004121!2.30e-42!169;UBERON:0000924!4.30e-41!173;UBERON:0006601!4.30e-41!173;UBERON:0002619!2.52e-38!22;UBERON:0001950!1.52e-37!20;UBERON:0000956!4.79e-37!25;UBERON:0000203!4.79e-37!25;UBERON:0003076!1.10e-27!15;UBERON:0003057!1.10e-27!15;UBERON:0002308!8.09e-27!9;UBERON:0000125!8.09e-27!9;UBERON:0002420!2.30e-26!9;UBERON:0007245!2.30e-26!9;UBERON:0010009!2.30e-26!9;UBERON:0010011!2.30e-26!9;UBERON:0000454!2.30e-26!9;UBERON:0004732!2.77e-22!13;UBERON:0000025!1.59e-21!194;UBERON:0009663!3.59e-21!7;UBERON:0004733!1.44e-19!12;UBERON:0002028!1.44e-19!12;UBERON:0007277!1.44e-19!12;UBERON:0002298!7.99e-19!8;UBERON:0004111!6.31e-18!241;UBERON:0001871!1.34e-17!7;UBERON:0000483!3.99e-17!309;UBERON:0000119!7.82e-17!312;UBERON:0000475!9.84e-16!365;UBERON:0000064!3.06e-15!219;UBERON:0000477!6.00e-15!286;UBERON:0000200!9.49e-13!6;UBERON:0000369!3.16e-12!4;UBERON:0002435!3.16e-12!4;UBERON:0000204!3.16e-12!4;UBERON:0010082!3.16e-12!4;UBERON:0002680!5.18e-12!9;UBERON:0001895!5.18e-12!9;UBERON:0010092!5.18e-12!9;UBERON:0006331!2.08e-10!3;UBERON:0000988!2.51e-10!3;UBERON:0002240!2.51e-10!3;UBERON:0002021!2.65e-10!5;UBERON:0000349!4.06e-10!5;UBERON:0002771!4.61e-10!3;UBERON:0001896!4.90e-10!3;UBERON:0005290!4.90e-10!3;UBERON:0010096!4.90e-10!3;UBERON:0001872!7.99e-10!5;UBERON:0000062!1.06e-09!511;UBERON:0005383!2.50e-09!3;UBERON:0005382!2.50e-09!3;UBERON:0000481!1.03e-07!347;UBERON:0005162!1.11e-07!2;UBERON:0000122!1.11e-07!2;UBERON:0001875!1.26e-07!2;UBERON:0006514!1.26e-07!2;UBERON:0002148!2.42e-07!2;UBERON:0009662!2.42e-07!2;UBERON:0001894!5.91e-07!7;UBERON:0006222!5.91e-07!7;UBERON:0001876!6.97e-07!2;UBERON:0000922!9.52e-07!612;UBERON:0001873!9.92e-07!2;UBERON:0010122!9.92e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.30e-62;34!UBERON:0003528;1.36e-58;34!UBERON:0002020;1.36e-58;34!UBERON:0002791;5.11e-57;32!UBERON:0001869;1.28e-56;32!UBERON:0000073;3.39e-54;53!UBERON:0002616;3.39e-54;53!UBERON:0002780;3.96e-52;41!UBERON:0001890;3.96e-52;41!UBERON:0002619;3.82e-49;22!UBERON:0001950;2.69e-47;20!UBERON:0000956;4.66e-43;25!UBERON:0000203;4.66e-43;25!UBERON:0001017;1.03e-37;75!UBERON:0000955;1.41e-34;68!UBERON:0000125;8.47e-34;9!UBERON:0002308;8.47e-34;9!UBERON:0001016;5.33e-31;83!UBERON:0004732;5.85e-29;13!UBERON:0002420;6.57e-26;9!UBERON:0007245;6.57e-26;9!UBERON:0010009;6.57e-26;9!UBERON:0010011;6.57e-26;9!UBERON:0000454;6.57e-26;9!UBERON:0009663;4.83e-25;7!UBERON:0004733;7.34e-25;12!UBERON:0002028;7.34e-25;12!UBERON:0002298;1.29e-20;6!UBERON:0000200;1.76e-19;6!UBERON:0007023;3.92e-19;114!UBERON:0002680;7.82e-19;9!UBERON:0001895;7.82e-19;9!UBERON:0002021;8.06e-16;5!UBERON:0000988;2.10e-15;3!UBERON:0002240;2.10e-15;3!UBERON:0005174;2.10e-15;3!UBERON:0001137;2.10e-15;3!UBERON:0001872;2.34e-15;5!UBERON:0011216;1.17e-13;132!UBERON:0001875;2.58e-11;2!UBERON:0006514;2.58e-11;2!UBERON:0000369;2.70e-11;4!UBERON:0002435;2.70e-11;4!UBERON:0000204;2.70e-11;4!UBERON:0005162;2.86e-11;2!UBERON:0000122;2.86e-11;2!UBERON:0001871;8.08e-11;6!UBERON:0002148;1.29e-10;2!UBERON:0006331;1.29e-10;2!UBERON:0009662;1.29e-10;2!UBERON:0002771;2.85e-10;2!UBERON:0000349;2.47e-09;5!UBERON:0010314;1.19e-08;132!UBERON:0001896;1.07e-07;3!UBERON:0005290;1.07e-07;3!UBERON:0002037;1.11e-07;6!UBERON:0001870;2.37e-07;3!UBERON:0005383;4.00e-07;3!UBERON:0005382;4.00e-07;3 | |||
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| ||
|short_description=p3@CDH20 | |short_description=p3@CDH20 | ||
}} | }} |
Latest revision as of 02:02, 20 September 2015
Short description: | p3@CDH20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDH20_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -159bp_to_ENST00000536675, uc002lif.2_5end |
EntrezGene: | CDH20 |
HGNC: | 1760 |
UniProt: | Q9HBT6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data