FFCP PHASE1:Hg19::chr10:97050777..97050806,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9124 | |EntrezGene=9124 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2067 | |HGNC=2067 | ||
|TSSclassifier=strong | |||
|UniProt=O00151 | |UniProt=O00151 | ||
|association_with_transcript=0bp_to_ENST00000329399,NM_020992,uc001kkh.2,uc001kki.2,uc001kkj.1,uc009xuv.2_5end | |association_with_transcript=0bp_to_ENST00000329399,NM_020992,uc001kkh.2,uc001kki.2,uc001kkj.1,uc009xuv.2_5end | ||
|cluster_id=chr10:97050777..97050806,- | |||
|coexpression_cluster_id=C2083 | |coexpression_cluster_id=C2083 | ||
|description=CAGE_peak_2_at_PDLIM1_5end | |description=CAGE_peak_2_at_PDLIM1_5end | ||
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|ontology_enrichment_celltype=CL:0000066!4.03e-22!254;CL:0002321!2.11e-20!248;CL:0000220!5.95e-20!246;CL:0000076!1.57e-13!62;CL:0000222!3.55e-10!119;CL:0002076!1.47e-09!43;CL:0000223!2.88e-09!59;CL:0000213!9.94e-09!57;CL:0000215!9.94e-09!57;CL:0002139!1.01e-08!24;CL:0000115!8.55e-08!35;CL:0002078!1.37e-07!44;CL:0000071!9.10e-07!18;CL:0002546!9.10e-07!18 | |ontology_enrichment_celltype=CL:0000066!4.03e-22!254;CL:0002321!2.11e-20!248;CL:0000220!5.95e-20!246;CL:0000076!1.57e-13!62;CL:0000222!3.55e-10!119;CL:0002076!1.47e-09!43;CL:0000223!2.88e-09!59;CL:0000213!9.94e-09!57;CL:0000215!9.94e-09!57;CL:0002139!1.01e-08!24;CL:0000115!8.55e-08!35;CL:0002078!1.37e-07!44;CL:0000071!9.10e-07!18;CL:0002546!9.10e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002139;9.88e-09;24!CL:0002076;2.44e-07;42!CL:0000076;8.57e-07;63!CL:0000071;8.77e-07;18 | |ontology_enrichment_celltype_v019=CL:0002139;9.88e-09;24!CL:0002076;2.44e-07;42!CL:0000076;8.57e-07;63!CL:0000071;8.77e-07;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.78e-22,253;CL:0002321,1.44e-20,250;CL:0000076,1.19e-13,63;CL:0000222,3.14e-10,121;CL:0002076,2.55e-09,42;CL:0000223,4.85e-09,58;CL:0000213,6.48e-09,58;CL:0000215,6.48e-09,58;CL:0002139,9.61e-09,24;CL:0000115,5.66e-08,36;CL:0002078,9.06e-08,45;CL:0000071,8.78e-07,18;CL:0002546,8.78e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;8.77e-07;18 | |ontology_enrichment_development_v019=CL:0002546;8.77e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.11e-17!169;UBERON:0000925!4.11e-17!169;UBERON:0006595!4.11e-17!169;UBERON:0003914!4.94e-17!118;UBERON:0001009!1.17e-14!113;UBERON:0004535!1.78e-13!110;UBERON:0004872!1.80e-13!84;UBERON:0001007!2.56e-13!155;UBERON:0001555!2.56e-13!155;UBERON:0007026!2.56e-13!155;UBERON:0002049!2.83e-13!79;UBERON:0007798!2.83e-13!79;UBERON:0003104!3.48e-13!238;UBERON:0009142!3.48e-13!238;UBERON:0000490!4.69e-13!138;UBERON:0000477!2.93e-11!286;UBERON:0005256!4.97e-11!143;UBERON:0000055!6.27e-11!69;UBERON:0003102!8.30e-11!95;UBERON:0002100!1.19e-10!216;UBERON:0000481!5.10e-10!347;UBERON:0004921!1.24e-09!129;UBERON:0004185!1.24e-09!129;UBERON:0003103!1.28e-09!69;UBERON:0000077!2.19e-09!130;UBERON:0004111!5.63e-09!241;UBERON:0000119!1.16e-08!312;UBERON:0009569!1.22e-08!113;UBERON:0001048!1.76e-08!168;UBERON:0005911!1.94e-08!82;UBERON:0001981!2.84e-08!60;UBERON:0007500!2.84e-08!60;UBERON:0004537!2.84e-08!60;UBERON:0006965!2.84e-08!60;UBERON:0000483!3.84e-08!309;UBERON:0000161!5.06e-08!35;UBERON:0007100!2.08e-07!27;UBERON:0003929!2.22e-07!54;UBERON:0004923!4.00e-07!57;UBERON:0000487!5.85e-07!22;UBERON:0000475!7.00e-07!365;UBERON:0000466!8.79e-07!126;UBERON:0001986!9.10e-07!18;UBERON:0004638!9.10e-07!18;UBERON:0004852!9.10e-07!18;UBERON:0001008!9.69e-07!45 | |ontology_enrichment_uberon=UBERON:0004119!4.11e-17!169;UBERON:0000925!4.11e-17!169;UBERON:0006595!4.11e-17!169;UBERON:0003914!4.94e-17!118;UBERON:0001009!1.17e-14!113;UBERON:0004535!1.78e-13!110;UBERON:0004872!1.80e-13!84;UBERON:0001007!2.56e-13!155;UBERON:0001555!2.56e-13!155;UBERON:0007026!2.56e-13!155;UBERON:0002049!2.83e-13!79;UBERON:0007798!2.83e-13!79;UBERON:0003104!3.48e-13!238;UBERON:0009142!3.48e-13!238;UBERON:0000490!4.69e-13!138;UBERON:0000477!2.93e-11!286;UBERON:0005256!4.97e-11!143;UBERON:0000055!6.27e-11!69;UBERON:0003102!8.30e-11!95;UBERON:0002100!1.19e-10!216;UBERON:0000481!5.10e-10!347;UBERON:0004921!1.24e-09!129;UBERON:0004185!1.24e-09!129;UBERON:0003103!1.28e-09!69;UBERON:0000077!2.19e-09!130;UBERON:0004111!5.63e-09!241;UBERON:0000119!1.16e-08!312;UBERON:0009569!1.22e-08!113;UBERON:0001048!1.76e-08!168;UBERON:0005911!1.94e-08!82;UBERON:0001981!2.84e-08!60;UBERON:0007500!2.84e-08!60;UBERON:0004537!2.84e-08!60;UBERON:0006965!2.84e-08!60;UBERON:0000483!3.84e-08!309;UBERON:0000161!5.06e-08!35;UBERON:0007100!2.08e-07!27;UBERON:0003929!2.22e-07!54;UBERON:0004923!4.00e-07!57;UBERON:0000487!5.85e-07!22;UBERON:0000475!7.00e-07!365;UBERON:0000466!8.79e-07!126;UBERON:0001986!9.10e-07!18;UBERON:0004638!9.10e-07!18;UBERON:0004852!9.10e-07!18;UBERON:0001008!9.69e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0000077;3.84e-08;27!UBERON:0000490;5.09e-08;33!UBERON:0000487;5.49e-07;22!UBERON:0007100;5.51e-07;25!UBERON:0004638;8.77e-07;18!UBERON:0001986;8.77e-07;18!UBERON:0004852;8.77e-07;18 | |ontology_enrichment_uberon_v019=UBERON:0000077;3.84e-08;27!UBERON:0000490;5.09e-08;33!UBERON:0000487;5.49e-07;22!UBERON:0007100;5.51e-07;25!UBERON:0004638;8.77e-07;18!UBERON:0001986;8.77e-07;18!UBERON:0004852;8.77e-07;18 | ||
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| ||
|short_description=p2@PDLIM1 | |short_description=p2@PDLIM1 | ||
}} | }} |
Latest revision as of 02:56, 20 September 2015
Short description: | p2@PDLIM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PDLIM1_5end |
Coexpression cluster: | C2083_Placental_acantholytic_Amniotic_Endothelial_Tracheal_Urothelial_Fibroblast |
Association with transcript: | 0bp_to_ENST00000329399, NM_020992, uc001kkh.2, uc001kki.2, uc001kkj.1, uc009xuv.2_5end |
EntrezGene: | PDLIM1 |
HGNC: | 2067 |
UniProt: | O00151 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.78e-22 | 253 |
embryonic cell | 1.44e-20 | 250 |
squamous epithelial cell | 1.19e-13 | 63 |
mesodermal cell | 3.14e-10 | 121 |
endo-epithelial cell | 2.55e-09 | 42 |
endodermal cell | 4.85e-09 | 58 |
lining cell | 6.48e-09 | 58 |
barrier cell | 6.48e-09 | 58 |
endothelial cell of vascular tree | 9.61e-09 | 24 |
endothelial cell | 5.66e-08 | 36 |
meso-epithelial cell | 9.06e-08 | 45 |
blood vessel endothelial cell | 8.78e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.78e-07 | 18 |