FFCP PHASE1:Hg19::chr10:98119004..98119021,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:98119004..98119021,-
|short_description=p6@OPALIN
|description=CAGE_peak_6_at_OPALIN_5end
|association_with_transcript=37bp_to_ENST00000371172_5end
|Entr...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=93377 | |EntrezGene=93377 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20707 | |HGNC=20707 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PE5 | |UniProt=Q96PE5 | ||
|association_with_transcript=37bp_to_ENST00000371172_5end | |||
|cluster_id=chr10:98119004..98119021,- | |||
|coexpression_cluster_id=C729 | |||
|description=CAGE_peak_6_at_OPALIN_5end | |||
|id=chr10:98119004..98119021,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;6.47e-17;1!UBERON:0006601;1.20e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!7.93e-88!41;UBERON:0001890!7.93e-88!41;UBERON:0006240!7.93e-88!41;UBERON:0003080!1.15e-85!42;UBERON:0001049!7.51e-84!57;UBERON:0005068!7.51e-84!57;UBERON:0006241!7.51e-84!57;UBERON:0007135!7.51e-84!57;UBERON:0001893!2.10e-82!34;UBERON:0002020!1.18e-81!34;UBERON:0003528!1.18e-81!34;UBERON:0002616!7.17e-81!59;UBERON:0001869!1.03e-79!32;UBERON:0002791!2.38e-77!33;UBERON:0000955!2.31e-72!69;UBERON:0006238!2.31e-72!69;UBERON:0001017!1.41e-64!82;UBERON:0005743!2.21e-61!86;UBERON:0003075!4.95e-58!86;UBERON:0007284!4.95e-58!86;UBERON:0003056!7.99e-58!61;UBERON:0002346!3.13e-55!90;UBERON:0000073!3.73e-55!94;UBERON:0001016!3.73e-55!94;UBERON:0002619!5.16e-53!22;UBERON:0001950!9.69e-51!20;UBERON:0007023!7.19e-49!115;UBERON:0000956!1.54e-46!25;UBERON:0000203!1.54e-46!25;UBERON:0000033!1.62e-41!123;UBERON:0002308!2.10e-39!9;UBERON:0000125!2.10e-39!9;UBERON:0000153!2.39e-39!129;UBERON:0007811!2.39e-39!129;UBERON:0002420!2.03e-30!9;UBERON:0007245!2.03e-30!9;UBERON:0010009!2.03e-30!9;UBERON:0010011!2.03e-30!9;UBERON:0000454!2.03e-30!9;UBERON:0009663!3.61e-29!7;UBERON:0004121!1.48e-28!169;UBERON:0000924!8.97e-28!173;UBERON:0006601!8.97e-28!173;UBERON:0000200!1.02e-23!6;UBERON:0000369!2.16e-23!4;UBERON:0002435!2.16e-23!4;UBERON:0000204!2.16e-23!4;UBERON:0010082!2.16e-23!4;UBERON:0000025!6.32e-21!194;UBERON:0001872!5.85e-19!5;UBERON:0005383!1.07e-17!3;UBERON:0005382!1.07e-17!3;UBERON:0001871!1.43e-17!7;UBERON:0000988!1.79e-17!3;UBERON:0002771!3.54e-17!3;UBERON:0004111!1.01e-15!241;UBERON:0000477!1.70e-13!286;UBERON:0001873!1.28e-12!2;UBERON:0010122!1.28e-12!2;UBERON:0001897!1.44e-12!2;UBERON:0001875!1.71e-12!2;UBERON:0006514!1.71e-12!2;UBERON:0000064!2.42e-12!219;UBERON:0002148!4.06e-12!2;UBERON:0009662!4.06e-12!2;UBERON:0000483!4.84e-12!309;UBERON:0000119!7.22e-12!312;UBERON:0002298!1.36e-11!8;UBERON:0000349!5.01e-11!5;UBERON:0002021!7.29e-11!5;UBERON:0000475!3.66e-10!365;UBERON:0006331!2.28e-08!3;UBERON:0001894!3.92e-08!7;UBERON:0006222!3.92e-08!7;UBERON:0004733!9.16e-08!12;UBERON:0002028!9.16e-08!12;UBERON:0007277!9.16e-08!12;UBERON:0002336!1.46e-07!1;UBERON:0001018!1.46e-07!1;UBERON:0002473!1.46e-07!1;UBERON:0005340!1.46e-07!1;UBERON:0002316!1.46e-07!1;UBERON:0003544!1.46e-07!1;UBERON:0001020!1.46e-07!1;UBERON:0005970!1.46e-07!1;UBERON:0002437!1.46e-07!1;UBERON:0002902!1.86e-07!1;UBERON:0009899!1.86e-07!1;UBERON:0001882!1.98e-07!1;UBERON:0005403!1.98e-07!1;UBERON:0002581!2.10e-07!1;UBERON:0007190!2.23e-07!1;UBERON:0002022!2.52e-07!1;UBERON:0003112!3.20e-07!1;UBERON:0000032!3.20e-07!1;UBERON:0005253!3.20e-07!1;UBERON:0003128!3.20e-07!1;UBERON:0002241!3.20e-07!1;UBERON:0001703!3.20e-07!1;UBERON:0004761!3.20e-07!1;UBERON:0009617!3.20e-07!1;UBERON:0004732!3.57e-07!13;UBERON:0001874!8.67e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.56e-37;34!UBERON:0002780;3.13e-35;41!UBERON:0001890;3.13e-35;41!UBERON:0001869;3.44e-31;32!UBERON:0000073;2.20e-26;53!UBERON:0002616;2.20e-26;53!UBERON:0001950;6.80e-26;20!UBERON:0003528;7.34e-26;34!UBERON:0002020;7.34e-26;34!UBERON:0002791;1.57e-25;32!UBERON:0002619;1.23e-23;22!UBERON:0000956;6.77e-21;25!UBERON:0000203;6.77e-21;25!UBERON:0002902;6.47e-17;1!UBERON:0002336;6.47e-17;1!UBERON:0011215;6.47e-17;1!UBERON:0001018;6.47e-17;1!UBERON:0002473;6.47e-17;1!UBERON:0005340;6.47e-17;1!UBERON:0003544;6.47e-17;1!UBERON:0005970;6.47e-17;1!UBERON:0009899;6.47e-17;1!UBERON:0002316;6.47e-17;1!UBERON:0001020;6.47e-17;1!UBERON:0002437;6.47e-17;1!UBERON:0002581;1.78e-16;1!UBERON:0001882;1.78e-16;1!UBERON:0002022;1.78e-16;1!UBERON:0007190;1.78e-16;1!UBERON:0005403;1.78e-16;1!UBERON:0000955;2.89e-16;68!UBERON:0001017;2.34e-13;75!UBERON:0001872;4.38e-13;5!UBERON:0000200;4.60e-11;6!UBERON:0001016;9.62e-11;83!UBERON:0007023;3.73e-10;114!UBERON:0001894;7.31e-10;7!UBERON:0009663;1.29e-09;7!UBERON:0001897;4.01e-09;2!UBERON:0005162;4.01e-09;2!UBERON:0000122;4.01e-09;2!UBERON:0010225;4.01e-09;2!UBERON:0001875;6.67e-09;2!UBERON:0006514;6.67e-09;2!UBERON:0002420;1.13e-07;9!UBERON:0000125;1.13e-07;9!UBERON:0007245;1.13e-07;9!UBERON:0002308;1.13e-07;9!UBERON:0010009;1.13e-07;9!UBERON:0010011;1.13e-07;9!UBERON:0000454;1.13e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,3.58e-51,41;UBERON:0001890,3.58e-51,41;UBERON:0003080,3.58e-51,41;UBERON:0006240,3.58e-51,41;UBERON:0000073,1.61e-46,53;UBERON:0002616,1.61e-46,53;UBERON:0001049,4.99e-44,56;UBERON:0005068,4.99e-44,56;UBERON:0006241,4.99e-44,56;UBERON:0007135,4.99e-44,56;UBERON:0001893,1.55e-42,34;UBERON:0001869,1.86e-36,32;UBERON:0000955,1.08e-35,68;UBERON:0006238,1.08e-35,68;UBERON:0003056,2.11e-34,61;UBERON:0001017,5.79e-30,81;UBERON:0003075,5.79e-30,82;UBERON:0007284,5.79e-30,82;UBERON:0002791,7.71e-29,32;UBERON:0002346,1.52e-28,86;UBERON:0003528,3.65e-27,34;UBERON:0002020,3.65e-27,34;UBERON:0001016,6.10e-27,89;UBERON:0001950,6.81e-26,20;UBERON:0002619,1.24e-23,22;UBERON:0010371,1.74e-23,104;UBERON:0007023,1.48e-21,114;UBERON:0000956,6.77e-21,25;UBERON:0000203,6.77e-21,25;UBERON:0010314,2.49e-18,132;UBERON:0002336,4.72e-17,1;UBERON:0011215,4.72e-17,1;UBERON:0001018,4.72e-17,1;UBERON:0002473,4.72e-17,1;UBERON:0005340,4.72e-17,1;UBERON:0003544,4.72e-17,1;UBERON:0005970,4.72e-17,1;UBERON:0002316,4.72e-17,1;UBERON:0001020,4.72e-17,1;UBERON:0002437,4.72e-17,1;UBERON:0002902,8.86e-17,1;UBERON:0009899,8.86e-17,1;UBERON:0001882,1.04e-16,1;UBERON:0005403,1.04e-16,1;UBERON:0002581,1.21e-16,1;UBERON:0007190,1.41e-16,1;UBERON:0002022,1.93e-16,1;UBERON:0004121,9.36e-14,171;UBERON:0000924,9.36e-14,171;UBERON:0006601,9.36e-14,171;UBERON:0001872,4.13e-13,5;UBERON:0000025,2.74e-12,192;UBERON:0000200,3.75e-11,6;UBERON:0011216,2.85e-10,223;UBERON:0001894,7.64e-10,7;UBERON:0006222,7.64e-10,7;UBERON:0009663,1.24e-09,7;UBERON:0004111,1.33e-09,240;UBERON:0005162,3.43e-09,2;UBERON:0000122,3.43e-09,2;UBERON:0001897,4.02e-09,2;UBERON:0010225,4.02e-09,2;UBERON:0001875,8.09e-09,2;UBERON:0006514,8.09e-09,2;UBERON:0002420,1.09e-07,9;UBERON:0000125,1.09e-07,9;UBERON:0007245,1.09e-07,9;UBERON:0002308,1.09e-07,9;UBERON:0010009,1.09e-07,9;UBERON:0010011,1.09e-07,9;UBERON:0000454,1.09e-07,9;UBERON:0000483,2.91e-07,306;UBERON:0000119,3.52e-07,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74214478529481,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.723578631752448,0,0,0,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69604531922708,0,2.34264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45614830698521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,1.39723980313457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.500763722825999,0,0,1.05563885000352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86264752779733,0,0.319267718114302,0.41023272848151,0,2.14387482639075,0.968853873791107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55336444622308,0.781078098613847,0.413373593002368,1.39514782426595,0,0,0,0,0,0,0,0,0,0,0,0,0.679697329768317,1.57854656550838,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51568513706384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48750831837634,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74214478529481,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.723578631752448,0,0,0,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69604531922708,0,2.34264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45614830698521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,1.39723980313457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.500763722825999,0,0,1.05563885000352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86264752779733,0,0.319267718114302,0.41023272848151,0,2.14387482639075,0.968853873791107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55336444622308,0.781078098613847,0.413373593002368,1.39514782426595,0,0,0,0,0,0,0,0,0,0,0,0,0.679697329768317,1.57854656550838,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51568513706384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48750831837634,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@OPALIN | |||
}} | }} |
Latest revision as of 05:03, 20 September 2015
Short description: | p6@OPALIN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_OPALIN_5end |
Coexpression cluster: | C729_diencephalon_corpus_thalamus_occipital_brain_medulla_frontal |
Association with transcript: | 37bp_to_ENST00000371172_5end |
EntrezGene: | OPALIN |
HGNC: | 20707 |
UniProt: | Q96PE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data