FFCP PHASE1:Hg19::chr10:98945694..98945729,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:98945694..98945729,- to FFCP PHASE1:Hg19::chr10:98945694..98945729,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6585 | |EntrezGene=6585 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11085 | |HGNC=11085 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T0V3,E7EWQ8,A6H8V1,O75093,Q5T0V1,Q5T0V4 | |UniProt=Q5T0V3,E7EWQ8,A6H8V1,O75093,Q5T0V1,Q5T0V4 | ||
|association_with_transcript=-11bp_to_ENST00000371054,ENST00000371057,NM_003061,uc001kmw.2,uc001kmz.2,uc009xvh.1_5end | |||
|cluster_id=chr10:98945694..98945729,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_2_at_SLIT1_5end | |||
|id=chr10:98945694..98945729,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;3.65e-07;2!CL:0000242;3.65e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.89e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.77e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.07e-54!82;UBERON:0001049!7.57e-54!57;UBERON:0005068!7.57e-54!57;UBERON:0006241!7.57e-54!57;UBERON:0007135!7.57e-54!57;UBERON:0005743!1.94e-53!86;UBERON:0000073!1.84e-52!94;UBERON:0001016!1.84e-52!94;UBERON:0002780!5.98e-46!41;UBERON:0001890!5.98e-46!41;UBERON:0006240!5.98e-46!41;UBERON:0003080!1.36e-44!42;UBERON:0002616!1.94e-44!59;UBERON:0000955!4.45e-44!69;UBERON:0006238!4.45e-44!69;UBERON:0001893!7.97e-42!34;UBERON:0002020!1.43e-41!34;UBERON:0003528!1.43e-41!34;UBERON:0002791!3.88e-40!33;UBERON:0002619!4.90e-40!22;UBERON:0001869!2.18e-39!32;UBERON:0003075!2.37e-37!86;UBERON:0007284!2.37e-37!86;UBERON:0001950!1.44e-36!20;UBERON:0002346!5.34e-35!90;UBERON:0000956!1.82e-34!25;UBERON:0000203!1.82e-34!25;UBERON:0003056!1.13e-30!61;UBERON:0004121!1.13e-27!169;UBERON:0000924!1.36e-26!173;UBERON:0006601!1.36e-26!173;UBERON:0007023!3.27e-25!115;UBERON:0000153!1.66e-23!129;UBERON:0007811!1.66e-23!129;UBERON:0000033!7.18e-22!123;UBERON:0001871!4.99e-15!7;UBERON:0000200!1.53e-11!6;UBERON:0000025!4.55e-11!194;UBERON:0003076!1.67e-10!15;UBERON:0003057!1.67e-10!15;UBERON:0000349!2.79e-10!5;UBERON:0001872!4.90e-10!5;UBERON:0002021!1.09e-09!5;UBERON:0002420!2.01e-09!9;UBERON:0007245!2.01e-09!9;UBERON:0010009!2.01e-09!9;UBERON:0010011!2.01e-09!9;UBERON:0000454!2.01e-09!9;UBERON:0002308!9.27e-09!9;UBERON:0000125!9.27e-09!9;UBERON:0000064!9.66e-09!219;UBERON:0004733!4.19e-07!12;UBERON:0002028!4.19e-07!12;UBERON:0007277!4.19e-07!12;UBERON:0000483!4.63e-07!309;UBERON:0000119!7.51e-07!312;UBERON:0004111!8.66e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.57e-67;22!UBERON:0001950;4.82e-61;20!UBERON:0000956;1.77e-58;25!UBERON:0000203;1.77e-58;25!UBERON:0001869;4.50e-56;32!UBERON:0002791;2.65e-52;32!UBERON:0003528;4.19e-51;34!UBERON:0002020;4.19e-51;34!UBERON:0001893;1.96e-50;34!UBERON:0002780;1.06e-42;41!UBERON:0001890;1.06e-42;41!UBERON:0000073;3.43e-27;53!UBERON:0002616;3.43e-27;53!UBERON:0001017;1.45e-22;75!UBERON:0001871;1.38e-21;6!UBERON:0000955;1.54e-21;68!UBERON:0000200;1.94e-18;6!UBERON:0001016;2.33e-18;83!UBERON:0000349;2.29e-16;5!UBERON:0001872;7.14e-16;5!UBERON:0002021;2.62e-15;5!UBERON:0001870;4.99e-10;3!UBERON:0002420;7.51e-09;9!UBERON:0007245;7.51e-09;9!UBERON:0010009;7.51e-09;9!UBERON:0010011;7.51e-09;9!UBERON:0000454;7.51e-09;9!UBERON:0011216;4.37e-08;132!UBERON:0000369;7.96e-08;4!UBERON:0002435;7.96e-08;4!UBERON:0000204;7.96e-08;4!UBERON:0001876;1.17e-07;2!UBERON:0001954;1.74e-07;2!UBERON:0003022;1.74e-07;2!UBERON:0002421;1.74e-07;2!UBERON:0002600;1.74e-07;2!UBERON:0002771;2.65e-07;2!UBERON:0002702;3.71e-07;2!UBERON:0007023;4.32e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,6.23e-67,22;UBERON:0001869,5.10e-63,32;UBERON:0001950,5.06e-61,20;UBERON:0002780,3.61e-59,41;UBERON:0001890,3.61e-59,41;UBERON:0003080,3.61e-59,41;UBERON:0006240,3.61e-59,41;UBERON:0001893,5.72e-59,34;UBERON:0003528,1.33e-58,34;UBERON:0002020,1.33e-58,34;UBERON:0000956,1.95e-58,25;UBERON:0000203,1.95e-58,25;UBERON:0002791,3.99e-58,32;UBERON:0001017,8.92e-55,81;UBERON:0001016,7.02e-51,89;UBERON:0001049,2.13e-50,56;UBERON:0005068,2.13e-50,56;UBERON:0006241,2.13e-50,56;UBERON:0007135,2.13e-50,56;UBERON:0000073,3.35e-47,53;UBERON:0002616,3.35e-47,53;UBERON:0000955,2.83e-45,68;UBERON:0006238,2.83e-45,68;UBERON:0003056,2.51e-37,61;UBERON:0003075,9.87e-32,82;UBERON:0007284,9.87e-32,82;UBERON:0002346,7.42e-30,86;UBERON:0010371,9.96e-27,104;UBERON:0004121,2.38e-24,171;UBERON:0000924,2.38e-24,171;UBERON:0006601,2.38e-24,171;UBERON:0011216,7.64e-24,223;UBERON:0001871,1.61e-21,6;UBERON:0007023,5.20e-19,114;UBERON:0000200,1.91e-18,6;UBERON:0010314,7.83e-18,132;UBERON:0000349,2.59e-16,5;UBERON:0001872,6.72e-16,5;UBERON:0002021,2.62e-15,5;UBERON:0000025,3.12e-11,192;UBERON:0001870,4.85e-10,3;UBERON:0002420,7.45e-09,9;UBERON:0007245,7.45e-09,9;UBERON:0010009,7.45e-09,9;UBERON:0010011,7.45e-09,9;UBERON:0000454,7.45e-09,9;UBERON:0000369,7.79e-08,4;UBERON:0002435,7.79e-08,4;UBERON:0000204,7.79e-08,4;UBERON:0010082,7.79e-08,4;UBERON:0001876,1.19e-07,2;UBERON:0001954,1.85e-07,2;UBERON:0003022,1.85e-07,2;UBERON:0002421,1.85e-07,2;UBERON:0002600,1.85e-07,2;UBERON:0002771,2.53e-07,2;UBERON:0004111,2.65e-07,240;UBERON:0002702,3.77e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89919659471683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,1.34759371519982,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5317047953172,0.122988438543114,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,7.8083912314573,3.86644406388848,4.69045542936177,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98394322751119,2.23196781820351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,12.9239194209619,11.253553312841,0,0.16480387422676,0,0,0.552567831062295,2.51932747854276,0,0,0,0,0,0,0,0,0,9.69332746095218,4.91670920257812,49.9034495002985,0.7812832832557,0,0,0,0,0,1.37897349296586,0.291604613383254,1.56262495439963,0,7.95936494927692,0,0.442317039724898,0,5.04586413454137,0,0.139423744278603,0,0,0,0,0,0,0,0,3.06579894587209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.539209063845416,0,1.63985112007737,0,0,0.242780379534093,0,1.20990716048664,23.2615298839173,0.189559738885464,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0.451961481561065,0,0,8.80020063786714,0.195551382734803,0,0,0,2.59362750877391,0.572682980829578,25.7392496792947,0,0,0,0,0,0,0,0,0.547621515567972,0,0,5.78352179414492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3379859675209,8.03600096058296,0,0,0,0,0,14.7621422679,0,0,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,2.11572162788304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43034089983493,9.64007492725509,8.26260142662899,0,0.332787154610557,0.869349641179368,1.93688088910723,0,0,0,0,6.08835377548946,5.21715702998971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.80685431837269,0,0,0,0,0,0,0,0.533458648470704,0,0,0,0,0,0.895260599125562,0,0.157265941855896,2.73024095480035,0,0,0,0,0,0,4.80342448971282,0,0,9.18477918879371,4.25089728976755,2.55414174491442,6.15349092722265,33.7776072937102,5.67089470206587,11.6262464854933,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,8.7798860003913,4.68646859168308,6.61397748803789,10.8441035431581,23.5199167877834,0,0,0,0,0.535701835878287,0,2.42786241694653,2.95960848756687,0,0,0,0.611727596791485,7.69541450685334,0,0,0.156986185701028,9.89828216470812,0,0,0,0,0.78624198594322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,2.10545517115895,0,0.356760272332706,0,4.06779911958088,3.01925687133347,0,0,1.41095188908457,0,3.77082475362602,0.196308467114945,1.18818560130834,4.226557275834,0,0,0.0644578879735772,0.599646935549574,0,0,0,0,0,0.286679166302903,0,14.4821874106648,27.4900934914438,1.5870805215462,0,0,0,0,0,0,0,0.26721740526556,0.0918948995348449,0,0,0.267964130156178,0,0.620597975171371,0,0.23806443146374,1.29177819672012,4.15900585782248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89919659471683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,1.34759371519982,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5317047953172,0.122988438543114,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,7.8083912314573,3.86644406388848,4.69045542936177,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98394322751119,2.23196781820351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,12.9239194209619,11.253553312841,0,0.16480387422676,0,0,0.552567831062295,2.51932747854276,0,0,0,0,0,0,0,0,0,9.69332746095218,4.91670920257812,49.9034495002985,0.7812832832557,0,0,0,0,0,1.37897349296586,0.291604613383254,1.56262495439963,0,7.95936494927692,0,0.442317039724898,0,5.04586413454137,0,0.139423744278603,0,0,0,0,0,0,0,0,3.06579894587209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.539209063845416,0,1.63985112007737,0,0,0.242780379534093,0,1.20990716048664,23.2615298839173,0.189559738885464,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0.451961481561065,0,0,8.80020063786714,0.195551382734803,0,0,0,2.59362750877391,0.572682980829578,25.7392496792947,0,0,0,0,0,0,0,0,0.547621515567972,0,0,5.78352179414492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3379859675209,8.03600096058296,0,0,0,0,0,14.7621422679,0,0,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,2.11572162788304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43034089983493,9.64007492725509,8.26260142662899,0,0.332787154610557,0.869349641179368,1.93688088910723,0,0,0,0,6.08835377548946,5.21715702998971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.80685431837269,0,0,0,0,0,0,0,0.533458648470704,0,0,0,0,0,0.895260599125562,0,0.157265941855896,2.73024095480035,0,0,0,0,0,0,4.80342448971282,0,0,9.18477918879371,4.25089728976755,2.55414174491442,6.15349092722265,33.7776072937102,5.67089470206587,11.6262464854933,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,8.7798860003913,4.68646859168308,6.61397748803789,10.8441035431581,23.5199167877834,0,0,0,0,0.535701835878287,0,2.42786241694653,2.95960848756687,0,0,0,0.611727596791485,7.69541450685334,0,0,0.156986185701028,9.89828216470812,0,0,0,0,0.78624198594322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,2.10545517115895,0,0.356760272332706,0,4.06779911958088,3.01925687133347,0,0,1.41095188908457,0,3.77082475362602,0.196308467114945,1.18818560130834,4.226557275834,0,0,0.0644578879735772,0.599646935549574,0,0,0,0,0,0.286679166302903,0,14.4821874106648,27.4900934914438,1.5870805215462,0,0,0,0,0,0,0,0.26721740526556,0.0918948995348449,0,0,0.267964130156178,0,0.620597975171371,0,0.23806443146374,1.29177819672012,4.15900585782248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p2@SLIT1 | |||
}} | }} |
Latest revision as of 06:11, 20 September 2015
Short description: | p2@SLIT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLIT1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -11bp_to_ENST00000371054, ENST00000371057, NM_003061, uc001kmw.2, uc001kmz.2, uc009xvh.1_5end |
EntrezGene: | SLIT1 |
HGNC: | 11085 |
UniProt: | Q5T0V3E7EWQ8A6H8V1O75093Q5T0V1Q5T0V4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.89e-07 | 2 |